RNA–Protein interactions for RNA: ENST00000551691.5

LIMA1-208, Transcript of LIM domain and actin binding 1, humanhuman

TSL 3

Gene LIMA1, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-208ENST00000551691 WASHC3Q9Y3C0 194 aa2.3□□□□□ -2.04
LIMA1-208ENST00000551691 ZNF729A6NN14 1252 aaPredicted RBP2.29□□□□□ -2.04
LIMA1-208ENST00000551691 SULT1B1O43704 296 aa2.29□□□□□ -2.04
LIMA1-208ENST00000551691 NDUFB2O95178 105 aa2.29□□□□□ -2.04
LIMA1-208ENST00000551691 ATP5G1P05496 136 aa2.29□□□□□ -2.04
LIMA1-208ENST00000551691 SCTP09683 121 aa2.29□□□□□ -2.04
LIMA1-208ENST00000551691 KRTAP1-4P0C5Y4 121 aa2.29□□□□□ -2.04
LIMA1-208ENST00000551691 CD36P16671 472 aa2.29□□□□□ -2.04
LIMA1-208ENST00000551691 GPX2P18283 190 aa2.29□□□□□ -2.04
LIMA1-208ENST00000551691 POLR2JP52435 117 aaKnown RBP2.29□□□□□ -2.04
LIMA1-208ENST00000551691 KRTAP12-2P59991 146 aa2.29□□□□□ -2.04
LIMA1-208ENST00000551691 HLA-DRB3P79483 266 aa2.29□□□□□ -2.04
LIMA1-208ENST00000551691 FABP5Q01469 135 aa2.29□□□□□ -2.04
LIMA1-208ENST00000551691 TMEM267Q0VDI3 215 aaPredicted RBP2.29□□□□□ -2.04
LIMA1-208ENST00000551691 FAM78BQ5VT40 261 aa2.29□□□□□ -2.04
LIMA1-208ENST00000551691 SLC25A26Q70HW3 274 aa2.29□□□□□ -2.04
LIMA1-208ENST00000551691 NIT1Q86X76 327 aa2.29□□□□□ -2.04
LIMA1-208ENST00000551691 TMEM75Q8N9X5 138 aa2.29□□□□□ -2.04
LIMA1-208ENST00000551691 GRPEL2Q8TAA5 225 aa2.29□□□□□ -2.04
LIMA1-208ENST00000551691 RASSF5Q8WWW0 418 aa2.29□□□□□ -2.04
LIMA1-208ENST00000551691 ASB17Q8WXJ9 295 aa2.29□□□□□ -2.04
LIMA1-208ENST00000551691 DIRAS2Q96HU8 199 aa2.29□□□□□ -2.04
LIMA1-208ENST00000551691 PYURFQ96I23 114 aa2.29□□□□□ -2.04
LIMA1-208ENST00000551691 CEP19Q96LK0 163 aa2.29□□□□□ -2.04
LIMA1-208ENST00000551691 LINC00167Q96N53 147 aa2.29□□□□□ -2.04
LIMA1-208ENST00000551691 RTBDNQ9BSG5 229 aaPredicted RBP2.29□□□□□ -2.04
LIMA1-208ENST00000551691 TMEM109Q9BVC6 243 aa2.29□□□□□ -2.04
LIMA1-208ENST00000551691 CTNNBIP1Q9NSA3 81 aaPredicted RBP2.29□□□□□ -2.04
LIMA1-208ENST00000551691 LINC00588Q9Y4M8 146 aa2.29□□□□□ -2.04
LIMA1-208ENST00000551691 ICOSQ9Y6W8 199 aa2.29□□□□□ -2.04
LIMA1-208ENST00000551691 S4R3C0 116 aa2.29□□□□□ -2.04
LIMA1-208ENST00000551691 MEIKINA0A087WXM9 373 aa2.28□□□□□ -2.04
LIMA1-208ENST00000551691 A0A1B0GV50 99 aa2.28□□□□□ -2.04
LIMA1-208ENST00000551691 A0A1B0GW64 132 aa2.28□□□□□ -2.04
LIMA1-208ENST00000551691 A0A1W2PQL4 384 aaPredicted RBP2.28□□□□□ -2.04
LIMA1-208ENST00000551691 ZNF878C9JN71 531 aa2.28□□□□□ -2.04
LIMA1-208ENST00000551691 MRASO14807 208 aa2.28□□□□□ -2.04
LIMA1-208ENST00000551691 ZNF324O75467 553 aaPredicted RBP2.28□□□□□ -2.04
LIMA1-208ENST00000551691 SHBGP04278 402 aa2.28□□□□□ -2.04
LIMA1-208ENST00000551691 EMP1P54849 157 aa2.28□□□□□ -2.04
LIMA1-208ENST00000551691 SPCS3P61009 180 aa2.28□□□□□ -2.04
LIMA1-208ENST00000551691 HERVK_113P63121 156 aa2.28□□□□□ -2.04
LIMA1-208ENST00000551691 JOSD1Q15040 202 aaPredicted RBP2.28□□□□□ -2.04
LIMA1-208ENST00000551691 SPIN3Q5JUX0 258 aa2.28□□□□□ -2.04
LIMA1-208ENST00000551691 Q6ZRN7 208 aaPredicted RBP2.28□□□□□ -2.04
LIMA1-208ENST00000551691 TCTEX1D1Q8N7M0 179 aa2.28□□□□□ -2.04
LIMA1-208ENST00000551691 ST20-AS1Q8NBB2 130 aa2.28□□□□□ -2.04
LIMA1-208ENST00000551691 LZICQ8WZA0 190 aa2.28□□□□□ -2.04
LIMA1-208ENST00000551691 HIST1H2BAQ96A08 127 aa2.28□□□□□ -2.04
LIMA1-208ENST00000551691 CST11Q9H112 138 aa2.28□□□□□ -2.04
LIMA1-208ENST00000551691 LINC00574Q9H8X3 128 aa2.28□□□□□ -2.04
LIMA1-208ENST00000551691 GPR84Q9NQS5 396 aa2.28□□□□□ -2.04
LIMA1-208ENST00000551691 IGKV3-7A0A075B6H7 116 aa2.27□□□□□ -2.05
LIMA1-208ENST00000551691 TGIF2-C20orf24A0A0A6YYL0 155 aa2.27□□□□□ -2.05
LIMA1-208ENST00000551691 A0A0B4J2C4 111 aa2.27□□□□□ -2.05
LIMA1-208ENST00000551691 IGKV1-12A0A0C4DH73 117 aa2.27□□□□□ -2.05
LIMA1-208ENST00000551691 DEGS1O15121 323 aa2.27□□□□□ -2.05
LIMA1-208ENST00000551691 GSTZ1O43708 216 aaPredicted RBP2.27□□□□□ -2.05
LIMA1-208ENST00000551691 NDUFA3O95167 84 aa2.27□□□□□ -2.05
LIMA1-208ENST00000551691 LTAP01374 205 aa2.27□□□□□ -2.05
LIMA1-208ENST00000551691 IGKV1D-12P01611 117 aa2.27□□□□□ -2.05
LIMA1-208ENST00000551691 BPGMP07738 259 aa2.27□□□□□ -2.05
LIMA1-208ENST00000551691 ATP6V0CP27449 155 aa2.27□□□□□ -2.05
LIMA1-208ENST00000551691 KRTAP10-8P60410 259 aa2.27□□□□□ -2.05
LIMA1-208ENST00000551691 FXYD3Q14802 87 aa2.27□□□□□ -2.05
LIMA1-208ENST00000551691 PLGLAQ15195 96 aa2.27□□□□□ -2.05
LIMA1-208ENST00000551691 SNCBQ16143 134 aa2.27□□□□□ -2.05
LIMA1-208ENST00000551691 SPINT4Q6UDR6 99 aa2.27□□□□□ -2.05
LIMA1-208ENST00000551691 Q6ZRU5 148 aa2.27□□□□□ -2.05
LIMA1-208ENST00000551691 KRTAP5-2Q701N4 177 aa2.27□□□□□ -2.05
LIMA1-208ENST00000551691 LYZL2Q7Z4W2 148 aa2.27□□□□□ -2.05
LIMA1-208ENST00000551691 BPIFB6Q8NFQ5 453 aa2.27□□□□□ -2.05
LIMA1-208ENST00000551691 THEM6Q8WUY1 208 aa2.27□□□□□ -2.05
LIMA1-208ENST00000551691 BTF3L4Q96K17 158 aa2.27□□□□□ -2.05
LIMA1-208ENST00000551691 GPX7Q96SL4 187 aaPredicted RBP2.27□□□□□ -2.05
LIMA1-208ENST00000551691 PHB2Q99623 299 aa2.27□□□□□ -2.05
LIMA1-208ENST00000551691 TSSK6Q9BXA6 273 aa2.27□□□□□ -2.05
LIMA1-208ENST00000551691 ZNF586Q9NXT0 402 aa2.27□□□□□ -2.05
LIMA1-208ENST00000551691 COA4Q9NYJ1 87 aa2.27□□□□□ -2.05
LIMA1-208ENST00000551691 ZNF230Q9UIE0 474 aaPredicted RBP2.27□□□□□ -2.05
LIMA1-208ENST00000551691 IGHV3OR16-8A0A075B7F1 116 aa2.26□□□□□ -2.05
LIMA1-208ENST00000551691 A0A087WTM6 91 aa2.26□□□□□ -2.05
LIMA1-208ENST00000551691 FUOMA2VDF0 154 aa2.26□□□□□ -2.05
LIMA1-208ENST00000551691 LINC00862A6NCI5 91 aa2.26□□□□□ -2.05
LIMA1-208ENST00000551691 EVPLLA8MZ36 301 aa2.26□□□□□ -2.05
LIMA1-208ENST00000551691 DISC1C4P0D8 188 aa2.26□□□□□ -2.05
LIMA1-208ENST00000551691 C15orf65H3BRN8 121 aa2.26□□□□□ -2.05
LIMA1-208ENST00000551691 SDCBPO00560 298 aaPredicted RBP2.26□□□□□ -2.05
LIMA1-208ENST00000551691 DENRO43583 198 aaKnown RBP2.26□□□□□ -2.05
LIMA1-208ENST00000551691 RBBP9O75884 186 aa2.26□□□□□ -2.05
LIMA1-208ENST00000551691 ZNF682O95780 498 aa2.26□□□□□ -2.05
LIMA1-208ENST00000551691 REG1AP05451 166 aa2.26□□□□□ -2.05
LIMA1-208ENST00000551691 CTXN2P0C2S0 81 aa2.26□□□□□ -2.05
LIMA1-208ENST00000551691 GZMMP51124 257 aa2.26□□□□□ -2.05
LIMA1-208ENST00000551691 LINC00315P59091 139 aa2.26□□□□□ -2.05
LIMA1-208ENST00000551691 RHOGP84095 191 aa2.26□□□□□ -2.05
LIMA1-208ENST00000551691 TMEM42Q69YG0 159 aa2.26□□□□□ -2.05
LIMA1-208ENST00000551691 STX12Q86Y82 276 aa2.26□□□□□ -2.05
LIMA1-208ENST00000551691 BAP18Q8IXM2 172 aa2.26□□□□□ -2.05
LIMA1-208ENST00000551691 LINC00311Q8N616 119 aa2.26□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms