RNA–Protein interactions for RNA: ENST00000551008.5

NPAS3-209, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 1 (best) BASIC

Gene NPAS3, Length 1,002 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-209ENST00000551008 G3V3Q6 166 aa9.02□□□□□ -0.97
NPAS3-209ENST00000551008 OR5I1Q13606 314 aa9.02□□□□□ -0.97
NPAS3-209ENST00000551008 ZNF266Q14584 549 aa9.02□□□□□ -0.97
NPAS3-209ENST00000551008 IBA57Q5T440 356 aaKnown RBP9.02□□□□□ -0.97
NPAS3-209ENST00000551008 ZNF680Q8NEM1 530 aa9.02□□□□□ -0.97
NPAS3-209ENST00000551008 TVP23CQ96ET8 276 aa9.02□□□□□ -0.97
NPAS3-209ENST00000551008 AQP10Q96PS8 301 aa9.02□□□□□ -0.97
NPAS3-209ENST00000551008 KRTAP17-1Q9BYP8 105 aa9.02□□□□□ -0.97
NPAS3-209ENST00000551008 IGHV1OR15-1A0A075B7D0 117 aa9.01□□□□□ -0.97
NPAS3-209ENST00000551008 NBDYA0A0U1RRE5 68 aa9.01□□□□□ -0.97
NPAS3-209ENST00000551008 RNF222A6NCQ9 220 aa9.01□□□□□ -0.97
NPAS3-209ENST00000551008 HMGB3O15347 200 aaKnown RBP9.01□□□□□ -0.97
NPAS3-209ENST00000551008 SSX7Q7RTT5 188 aa9.01□□□□□ -0.97
NPAS3-209ENST00000551008 GNPNAT1Q96EK6 184 aaPredicted RBP9.01□□□□□ -0.97
NPAS3-209ENST00000551008 ATG101Q9BSB4 218 aa9.01□□□□□ -0.97
NPAS3-209ENST00000551008 MRPL16Q9NX20 251 aaKnown RBP9.01□□□□□ -0.97
NPAS3-209ENST00000551008 A0A096LPF7 62 aa9□□□□□ -0.97
NPAS3-209ENST00000551008 TRGV1A0A0A0MS02 117 aa9□□□□□ -0.97
NPAS3-209ENST00000551008 H3BNG1 76 aa9□□□□□ -0.97
NPAS3-209ENST00000551008 TAS2R45P59539 299 aa9□□□□□ -0.97
NPAS3-209ENST00000551008 ESRGQ1W209 222 aa9□□□□□ -0.97
NPAS3-209ENST00000551008 ACOT6Q3I5F7 207 aaPredicted RBP9□□□□□ -0.97
NPAS3-209ENST00000551008 MUC21Q5SSG8 566 aa9□□□□□ -0.97
NPAS3-209ENST00000551008 C1orf134Q5TEV5 83 aa9□□□□□ -0.97
NPAS3-209ENST00000551008 Q6AWC8 147 aa9□□□□□ -0.97
NPAS3-209ENST00000551008 OR2G3Q8NGZ4 309 aa9□□□□□ -0.97
NPAS3-209ENST00000551008 MED28Q9H204 178 aa9□□□□□ -0.97
NPAS3-209ENST00000551008 SH3BGRL3Q9H299 93 aa9□□□□□ -0.97
NPAS3-209ENST00000551008 OTORQ9NRC9 128 aa9□□□□□ -0.97
NPAS3-209ENST00000551008 LRP1BQ9NZR2 4599 aa9□□□□□ -0.97
NPAS3-209ENST00000551008 TRAV8-1A0A0A6YYK1 113 aa8.99□□□□□ -0.97
NPAS3-209ENST00000551008 PGPA6NDG6 321 aa8.99□□□□□ -0.97
NPAS3-209ENST00000551008 RGS13O14921 159 aa8.99□□□□□ -0.97
NPAS3-209ENST00000551008 ARL14EPLP0DKL9 152 aa8.99□□□□□ -0.97
NPAS3-209ENST00000551008 ATP6V0CP27449 155 aa8.99□□□□□ -0.97
NPAS3-209ENST00000551008 CCL18P55774 89 aa8.99□□□□□ -0.97
NPAS3-209ENST00000551008 GNG5P63218 68 aa8.99□□□□□ -0.97
NPAS3-209ENST00000551008 TNP2Q05952 138 aa8.99□□□□□ -0.97
NPAS3-209ENST00000551008 PQLC2Q6ZP29 291 aa8.99□□□□□ -0.97
NPAS3-209ENST00000551008 HSD17B11Q8NBQ5 300 aa8.99□□□□□ -0.97
NPAS3-209ENST00000551008 OR10G4Q8NGN3 311 aa8.99□□□□□ -0.97
NPAS3-209ENST00000551008 OR10G9Q8NGN4 311 aa8.99□□□□□ -0.97
NPAS3-209ENST00000551008 OR10G7Q8NGN6 311 aa8.99□□□□□ -0.97
NPAS3-209ENST00000551008 SUN5Q8TC36 379 aa8.99□□□□□ -0.97
NPAS3-209ENST00000551008 HYLS1Q96M11 299 aa8.99□□□□□ -0.97
NPAS3-209ENST00000551008 MDFICQ9P1T7 246 aa8.99□□□□□ -0.97
NPAS3-209ENST00000551008 LENEPQ9Y5L5 61 aa8.99□□□□□ -0.97
NPAS3-209ENST00000551008 HSPG2P98160 4391 aa8.98□□□□□ -0.97
NPAS3-209ENST00000551008 GIPP09681 153 aaPredicted RBP8.98□□□□□ -0.97
NPAS3-209ENST00000551008 STAG3L2P0CL84 134 aa8.98□□□□□ -0.97
NPAS3-209ENST00000551008 STAG3L3P0CL85 134 aa8.98□□□□□ -0.97
NPAS3-209ENST00000551008 CSN1S1P47710 185 aa8.98□□□□□ -0.97
NPAS3-209ENST00000551008 LCE2AQ5TA79 106 aaPredicted RBP8.98□□□□□ -0.97
NPAS3-209ENST00000551008 GOLT1AQ6ZVE7 132 aa8.98□□□□□ -0.97
NPAS3-209ENST00000551008 TMED6Q8WW62 240 aa8.98□□□□□ -0.97
NPAS3-209ENST00000551008 ST6GAL2Q96JF0 529 aa8.98□□□□□ -0.97
NPAS3-209ENST00000551008 PSMG3Q9BT73 122 aaPredicted RBP8.98□□□□□ -0.97
NPAS3-209ENST00000551008 UPK3BQ9BT76 320 aa8.98□□□□□ -0.97
NPAS3-209ENST00000551008 TRGV2A0A075B6R0 118 aa8.97□□□□□ -0.97
NPAS3-209ENST00000551008 IGHV3-53P01767 116 aa8.97□□□□□ -0.97
NPAS3-209ENST00000551008 CDC34P49427 236 aaPredicted RBP8.97□□□□□ -0.97
NPAS3-209ENST00000551008 FHL2Q14192 279 aa8.97□□□□□ -0.97
NPAS3-209ENST00000551008 ZNF575Q86XF7 245 aa8.97□□□□□ -0.97
NPAS3-209ENST00000551008 RAB24Q969Q5 203 aa8.97□□□□□ -0.97
NPAS3-209ENST00000551008 RPH3ALQ9UNE2 315 aa8.97□□□□□ -0.97
NPAS3-209ENST00000551008 MRPS16Q9Y3D3 137 aaKnown RBP8.97□□□□□ -0.97
NPAS3-209ENST00000551008 A0A1W2PPV4 95 aa8.96□□□□□ -0.98
NPAS3-209ENST00000551008 A6NJY4 79 aa8.96□□□□□ -0.98
NPAS3-209ENST00000551008 GGTLC3B5MD39 225 aa8.96□□□□□ -0.98
NPAS3-209ENST00000551008 F6UZH7 168 aa8.96□□□□□ -0.98
NPAS3-209ENST00000551008 GCHFRP30047 84 aa8.96□□□□□ -0.98
NPAS3-209ENST00000551008 ZNF415Q09FC8 603 aa8.96□□□□□ -0.98
NPAS3-209ENST00000551008 ZNF726P1Q15940 193 aa8.96□□□□□ -0.98
NPAS3-209ENST00000551008 TDRG1Q3Y452 100 aa8.96□□□□□ -0.98
NPAS3-209ENST00000551008 RPL7L1Q6DKI1 246 aaKnown RBP8.96□□□□□ -0.98
NPAS3-209ENST00000551008 C6orf223Q8N319 242 aa8.96□□□□□ -0.98
NPAS3-209ENST00000551008 ARL6IP6Q8N6S5 226 aa8.96□□□□□ -0.98
NPAS3-209ENST00000551008 ARPC5LQ9BPX5 153 aa8.96□□□□□ -0.98
NPAS3-209ENST00000551008 Q9H8V8 135 aa8.96□□□□□ -0.98
NPAS3-209ENST00000551008 C11orf21Q9P2W6 132 aa8.96□□□□□ -0.98
NPAS3-209ENST00000551008 TNFSF18Q9UNG2 199 aa8.96□□□□□ -0.98
NPAS3-209ENST00000551008 DNAH5Q8TE73 4624 aa8.95□□□□□ -0.98
NPAS3-209ENST00000551008 IGLV2-11P01706 119 aa8.95□□□□□ -0.98
NPAS3-209ENST00000551008 ZNF80P51504 273 aaPredicted RBP8.95□□□□□ -0.98
NPAS3-209ENST00000551008 CRYBA4P53673 196 aa8.95□□□□□ -0.98
NPAS3-209ENST00000551008 TMEM183BQ1AE95 376 aa8.95□□□□□ -0.98
NPAS3-209ENST00000551008 TMEM183AQ8IXX5 376 aa8.95□□□□□ -0.98
NPAS3-209ENST00000551008 SGK494Q96LW2 274 aa8.95□□□□□ -0.98
NPAS3-209ENST00000551008 RYR1P21817 5038 aa8.94□□□□□ -0.98
NPAS3-209ENST00000551008 IGHV3-16A0A0C4DH30 117 aa8.94□□□□□ -0.98
NPAS3-209ENST00000551008 GNRH2O43555 120 aa8.94□□□□□ -0.98
NPAS3-209ENST00000551008 SFTA3P0C7M3 94 aa8.94□□□□□ -0.98
NPAS3-209ENST00000551008 LCE2CQ5TA81 110 aa8.94□□□□□ -0.98
NPAS3-209ENST00000551008 CMTM2Q8TAZ6 248 aa8.94□□□□□ -0.98
NPAS3-209ENST00000551008 ZNF479Q96JC4 524 aa8.94□□□□□ -0.98
NPAS3-209ENST00000551008 APOBP04114 4563 aaKnown RBP8.94□□□□□ -0.98
NPAS3-209ENST00000551008 FXYD6-FXYD2A0A087WZ82 144 aa8.93□□□□□ -0.98
NPAS3-209ENST00000551008 PAX4O43316 350 aa8.93□□□□□ -0.98
NPAS3-209ENST00000551008 TCRAP04437 139 aa8.93□□□□□ -0.98
NPAS3-209ENST00000551008 TYMSP04818 313 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms