RNA–Protein interactions for RNA: ENST00000550914.6

PTCH1-221, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 630 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-221ENST00000550914 IGKV2D-40P01614 121 aaPredicted RBP8.74□□□□□ -1.01
PTCH1-221ENST00000550914 IGHV3-53P01767 116 aa8.74□□□□□ -1.01
PTCH1-221ENST00000550914 NBEAP1P0C6P0 100 aa8.74□□□□□ -1.01
PTCH1-221ENST00000550914 ZNF138P52744 262 aa8.74□□□□□ -1.01
PTCH1-221ENST00000550914 RAB32Q13637 225 aa8.74□□□□□ -1.01
PTCH1-221ENST00000550914 FAM167A-AS1Q96KT0 104 aa8.74□□□□□ -1.01
PTCH1-221ENST00000550914 C8orf49Q96NF6 230 aa8.74□□□□□ -1.01
PTCH1-221ENST00000550914 SEC22CQ9BRL7 303 aa8.74□□□□□ -1.01
PTCH1-221ENST00000550914 GPN1Q9HCN4 374 aaPredicted RBP8.74□□□□□ -1.01
PTCH1-221ENST00000550914 A0A087WTM6 91 aa8.73□□□□□ -1.01
PTCH1-221ENST00000550914 RBAKDNA6NC62 111 aa8.73□□□□□ -1.01
PTCH1-221ENST00000550914 PRAF2O60831 178 aa8.73□□□□□ -1.01
PTCH1-221ENST00000550914 INAFM2P0DMQ5 153 aa8.73□□□□□ -1.01
PTCH1-221ENST00000550914 GCSAMLQ5JQS6 135 aa8.73□□□□□ -1.01
PTCH1-221ENST00000550914 FAM122CQ6P4D5 195 aa8.73□□□□□ -1.01
PTCH1-221ENST00000550914 SPXQ9BT56 116 aa8.73□□□□□ -1.01
PTCH1-221ENST00000550914 OR51M1Q9H341 326 aa8.73□□□□□ -1.01
PTCH1-221ENST00000550914 KCNIP2Q9NS61 270 aa8.73□□□□□ -1.01
PTCH1-221ENST00000550914 TRGV4A0A0C4DH28 118 aa8.72□□□□□ -1.01
PTCH1-221ENST00000550914 K7EQD1 137 aa8.72□□□□□ -1.01
PTCH1-221ENST00000550914 ORM1P02763 201 aa8.72□□□□□ -1.01
PTCH1-221ENST00000550914 DNAH10OSP0CZ25 163 aa8.72□□□□□ -1.01
PTCH1-221ENST00000550914 EVI2AP22794 236 aa8.72□□□□□ -1.01
PTCH1-221ENST00000550914 SRIP30626 198 aa8.72□□□□□ -1.01
PTCH1-221ENST00000550914 ZNF266Q14584 549 aa8.72□□□□□ -1.01
PTCH1-221ENST00000550914 OR10G4Q8NGN3 311 aa8.72□□□□□ -1.01
PTCH1-221ENST00000550914 RASL10AQ92737 203 aa8.72□□□□□ -1.01
PTCH1-221ENST00000550914 FRZBQ92765 325 aa8.72□□□□□ -1.01
PTCH1-221ENST00000550914 MSRB1Q9NZV6 116 aa8.72□□□□□ -1.01
PTCH1-221ENST00000550914 LENEPQ9Y5L5 61 aa8.72□□□□□ -1.01
PTCH1-221ENST00000550914 TNFRSF18Q9Y5U5 241 aa8.72□□□□□ -1.01
PTCH1-221ENST00000550914 H2AFB2P0C5Z0 115 aa8.71□□□□□ -1.02
PTCH1-221ENST00000550914 CSN1S1P47710 185 aa8.71□□□□□ -1.02
PTCH1-221ENST00000550914 Q5VSD8 79 aa8.71□□□□□ -1.02
PTCH1-221ENST00000550914 Q6AWC8 147 aa8.71□□□□□ -1.02
PTCH1-221ENST00000550914 Q6ZQT7 251 aa8.71□□□□□ -1.02
PTCH1-221ENST00000550914 MIR17HGQ75NE6 70 aa8.71□□□□□ -1.02
PTCH1-221ENST00000550914 C10orf126Q8N4M7 172 aa8.71□□□□□ -1.02
PTCH1-221ENST00000550914 PCNPQ8WW12 178 aaKnown RBP8.71□□□□□ -1.02
PTCH1-221ENST00000550914 FXYD5Q96DB9 178 aa8.71□□□□□ -1.02
PTCH1-221ENST00000550914 TXNDC17Q9BRA2 123 aa8.71□□□□□ -1.02
PTCH1-221ENST00000550914 PAXXQ9BUH6 204 aa8.71□□□□□ -1.02
PTCH1-221ENST00000550914 E5RGE8 158 aa8.7□□□□□ -1.02
PTCH1-221ENST00000550914 FUSP35637 526 aaKnown RBP eCLIP8.7□□□□□ -1.02
PTCH1-221ENST00000550914 KRTAP10-1P60331 282 aa8.7□□□□□ -1.02
PTCH1-221ENST00000550914 SH2D6Q7Z4S9 175 aa8.7□□□□□ -1.02
PTCH1-221ENST00000550914 OR5C1Q8NGR4 320 aa8.7□□□□□ -1.02
PTCH1-221ENST00000550914 Q8TAT8 98 aa8.7□□□□□ -1.02
PTCH1-221ENST00000550914 THAP6Q8TBB0 222 aa8.7□□□□□ -1.02
PTCH1-221ENST00000550914 PHYHIPLQ96FC7 376 aa8.7□□□□□ -1.02
PTCH1-221ENST00000550914 SLC25A31Q9H0C2 315 aa8.7□□□□□ -1.02
PTCH1-221ENST00000550914 MDFICQ9P1T7 246 aa8.7□□□□□ -1.02
PTCH1-221ENST00000550914 TRGV11A0A075B6L2 103 aa8.69□□□□□ -1.02
PTCH1-221ENST00000550914 C9JCJ5 164 aa8.69□□□□□ -1.02
PTCH1-221ENST00000550914 OR10J4P0C629 311 aa8.69□□□□□ -1.02
PTCH1-221ENST00000550914 GYPEP15421 78 aa8.69□□□□□ -1.02
PTCH1-221ENST00000550914 TIRAPP58753 221 aa8.69□□□□□ -1.02
PTCH1-221ENST00000550914 NHLH2Q02577 135 aa8.69□□□□□ -1.02
PTCH1-221ENST00000550914 TDRG1Q3Y452 100 aa8.69□□□□□ -1.02
PTCH1-221ENST00000550914 WFDC10BQ8IUB3 73 aa8.69□□□□□ -1.02
PTCH1-221ENST00000550914 TMED6Q8WW62 240 aa8.69□□□□□ -1.02
PTCH1-221ENST00000550914 ZNF479Q96JC4 524 aa8.69□□□□□ -1.02
PTCH1-221ENST00000550914 CCDC32Q9BV29 185 aa8.69□□□□□ -1.02
PTCH1-221ENST00000550914 TRAV4A0A0B4J268 109 aa8.68□□□□□ -1.02
PTCH1-221ENST00000550914 FAM240BA0A1B0GVZ2 78 aa8.68□□□□□ -1.02
PTCH1-221ENST00000550914 C17orf112F2Z3M2 114 aa8.68□□□□□ -1.02
PTCH1-221ENST00000550914 OR7C2O60412 319 aa8.68□□□□□ -1.02
PTCH1-221ENST00000550914 SFTA3P0C7M3 94 aa8.68□□□□□ -1.02
PTCH1-221ENST00000550914 GCSHP23434 173 aa8.68□□□□□ -1.02
PTCH1-221ENST00000550914 TMEM183BQ1AE95 376 aa8.68□□□□□ -1.02
PTCH1-221ENST00000550914 MUC21Q5SSG8 566 aa8.68□□□□□ -1.02
PTCH1-221ENST00000550914 FAM159AQ6UWV7 190 aa8.68□□□□□ -1.02
PTCH1-221ENST00000550914 TMEM183AQ8IXX5 376 aa8.68□□□□□ -1.02
PTCH1-221ENST00000550914 WDR61Q9GZS3 305 aaKnown RBP8.68□□□□□ -1.02
PTCH1-221ENST00000550914 CRYGDP07320 174 aa8.67□□□□□ -1.02
PTCH1-221ENST00000550914 RANP62826 216 aaKnown RBP8.67□□□□□ -1.02
PTCH1-221ENST00000550914 NMES1Q9C002 83 aa8.67□□□□□ -1.02
PTCH1-221ENST00000550914 DIRC3C9JPN6 131 aa8.66□□□□□ -1.02
PTCH1-221ENST00000550914 M0R2P5 195 aa8.66□□□□□ -1.02
PTCH1-221ENST00000550914 UBE2L3P68036 154 aaKnown RBP8.66□□□□□ -1.02
PTCH1-221ENST00000550914 KHDC3LQ587J8 217 aa8.66□□□□□ -1.02
PTCH1-221ENST00000550914 MZT2BQ6NZ67 158 aa8.66□□□□□ -1.02
PTCH1-221ENST00000550914 ARL6IP6Q8N6S5 226 aa8.66□□□□□ -1.02
PTCH1-221ENST00000550914 NTN5Q8WTR8 489 aaPredicted RBP8.66□□□□□ -1.02
PTCH1-221ENST00000550914 TMEM70Q9BUB7 260 aa8.66□□□□□ -1.02
PTCH1-221ENST00000550914 FAM229AH3BQW9 127 aa8.65□□□□□ -1.02
PTCH1-221ENST00000550914 TAS2R45P59539 299 aa8.65□□□□□ -1.02
PTCH1-221ENST00000550914 CYCSP99999 105 aaKnown RBP8.65□□□□□ -1.02
PTCH1-221ENST00000550914 OR4C5Q8NGB2 326 aa8.65□□□□□ -1.02
PTCH1-221ENST00000550914 OR5AC2Q9NZP5 309 aa8.65□□□□□ -1.02
PTCH1-221ENST00000550914 NDUFA13Q9P0J0 144 aa8.65□□□□□ -1.02
PTCH1-221ENST00000550914 IGHV3-38A0A0C4DH36 116 aa8.64□□□□□ -1.03
PTCH1-221ENST00000550914 LRCOL1A6NCL2 159 aa8.64□□□□□ -1.03
PTCH1-221ENST00000550914 GATA1P15976 413 aaPredicted RBP8.64□□□□□ -1.03
PTCH1-221ENST00000550914 ASAH1Q13510 395 aa8.64□□□□□ -1.03
PTCH1-221ENST00000550914 LINC01556Q5JQF7 62 aa8.64□□□□□ -1.03
PTCH1-221ENST00000550914 LINC00299Q6ZSB3 139 aa8.64□□□□□ -1.03
PTCH1-221ENST00000550914 ATP5SQ99766 215 aa8.64□□□□□ -1.03
PTCH1-221ENST00000550914 OTORQ9NRC9 128 aa8.64□□□□□ -1.03
PTCH1-221ENST00000550914 IGLV5-52A0A0A0MRZ9 124 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms