RNA–Protein interactions for RNA: ENST00000550828.1

ERBB3-215, Transcript of erb-b2 receptor tyrosine kinase 3, humanhuman

TSL 1 (best)

Gene ERBB3, Length 266 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB3-215ENST00000550828 RNF183Q96D59 192 aa9.79□□□□□ -0.84
ERBB3-215ENST00000550828 TREM1Q9NP99 234 aa9.79□□□□□ -0.84
ERBB3-215ENST00000550828 MED9Q9NWA0 146 aa9.79□□□□□ -0.84
ERBB3-215ENST00000550828 TRAV12-3A0A0B4J271 114 aa9.78□□□□□ -0.84
ERBB3-215ENST00000550828 C7orf71A4D174 169 aa9.78□□□□□ -0.84
ERBB3-215ENST00000550828 FBLL1A6NHQ2 334 aaKnown RBP9.78□□□□□ -0.84
ERBB3-215ENST00000550828 TMEM250H0YL14 139 aa9.78□□□□□ -0.84
ERBB3-215ENST00000550828 NDUFS6O75380 124 aaKnown RBP9.78□□□□□ -0.84
ERBB3-215ENST00000550828 ZNF324O75467 553 aaPredicted RBP9.78□□□□□ -0.84
ERBB3-215ENST00000550828 TSPOP30536 169 aa9.78□□□□□ -0.84
ERBB3-215ENST00000550828 RNASE4P34096 147 aaKnown RBP9.78□□□□□ -0.84
ERBB3-215ENST00000550828 CRIP1P50238 77 aa9.78□□□□□ -0.84
ERBB3-215ENST00000550828 NUTF2P61970 127 aaKnown RBP9.78□□□□□ -0.84
ERBB3-215ENST00000550828 CENPWQ5EE01 88 aa9.78□□□□□ -0.84
ERBB3-215ENST00000550828 ZNF705AQ6ZN79 300 aaPredicted RBP9.78□□□□□ -0.84
ERBB3-215ENST00000550828 NHLRC2Q8NBF2 726 aa9.78□□□□□ -0.84
ERBB3-215ENST00000550828 ZC2HC1AQ96GY0 325 aa9.78□□□□□ -0.84
ERBB3-215ENST00000550828 MLST8Q9BVC4 326 aa9.78□□□□□ -0.84
ERBB3-215ENST00000550828 PARLQ9H300 379 aa9.78□□□□□ -0.84
ERBB3-215ENST00000550828 X6R8D5 127 aa9.78□□□□□ -0.84
ERBB3-215ENST00000550828 LINC00862A6NCI5 91 aa9.77□□□□□ -0.85
ERBB3-215ENST00000550828 PGPEP1LA6NFU8 196 aa9.77□□□□□ -0.85
ERBB3-215ENST00000550828 INSP01308 110 aa9.77□□□□□ -0.85
ERBB3-215ENST00000550828 UBE2G1P62253 170 aa9.77□□□□□ -0.85
ERBB3-215ENST00000550828 COX8CQ7Z4L0 72 aa9.77□□□□□ -0.85
ERBB3-215ENST00000550828 C1QTNF4Q9BXJ3 329 aa9.77□□□□□ -0.85
ERBB3-215ENST00000550828 C11orf21Q9P2W6 132 aa9.77□□□□□ -0.85
ERBB3-215ENST00000550828 KMT2CQ8NEZ4 4911 aaKnown RBP9.77□□□□□ -0.85
ERBB3-215ENST00000550828 SPRY2O43597 315 aa9.76□□□□□ -0.85
ERBB3-215ENST00000550828 GPX1P07203 203 aa9.76□□□□□ -0.85
ERBB3-215ENST00000550828 TAS2R60P59551 318 aa9.76□□□□□ -0.85
ERBB3-215ENST00000550828 Q6AWC8 147 aa9.76□□□□□ -0.85
ERBB3-215ENST00000550828 TMEM183AQ8IXX5 376 aa9.76□□□□□ -0.85
ERBB3-215ENST00000550828 RCHY1Q96PM5 261 aa9.76□□□□□ -0.85
ERBB3-215ENST00000550828 IGHV3OR16-12A0A075B7B8 117 aa9.75□□□□□ -0.85
ERBB3-215ENST00000550828 GCGP01275 180 aa9.75□□□□□ -0.85
ERBB3-215ENST00000550828 S100A9P06702 114 aaKnown RBP9.75□□□□□ -0.85
ERBB3-215ENST00000550828 CEBPGP53567 150 aa9.75□□□□□ -0.85
ERBB3-215ENST00000550828 PEA15Q15121 130 aa9.75□□□□□ -0.85
ERBB3-215ENST00000550828 ZNF674Q2M3X9 581 aa9.75□□□□□ -0.85
ERBB3-215ENST00000550828 COMMD7Q86VX2 200 aa9.75□□□□□ -0.85
ERBB3-215ENST00000550828 BAGE2Q86Y30 109 aa9.75□□□□□ -0.85
ERBB3-215ENST00000550828 SPATA25Q9BR10 227 aa9.75□□□□□ -0.85
ERBB3-215ENST00000550828 NDFIP1Q9BT67 221 aa9.75□□□□□ -0.85
ERBB3-215ENST00000550828 TP53TG1Q9Y2A0 90 aa9.75□□□□□ -0.85
ERBB3-215ENST00000550828 ZFP30Q9Y2G7 519 aa9.75□□□□□ -0.85
ERBB3-215ENST00000550828 MUC4Q99102 2169 aa9.74□□□□□ -0.85
ERBB3-215ENST00000550828 ZNF705GA8MUZ8 300 aaPredicted RBP9.74□□□□□ -0.85
ERBB3-215ENST00000550828 K7EN84 100 aa9.74□□□□□ -0.85
ERBB3-215ENST00000550828 SMUG1Q53HV7 270 aa9.74□□□□□ -0.85
ERBB3-215ENST00000550828 SAPCD1Q5SSQ6 148 aa9.74□□□□□ -0.85
ERBB3-215ENST00000550828 OR11H2Q8NH07 326 aa9.74□□□□□ -0.85
ERBB3-215ENST00000550828 WWC2-AS2Q96NR7 200 aa9.74□□□□□ -0.85
ERBB3-215ENST00000550828 GOLT1BQ9Y3E0 138 aa9.74□□□□□ -0.85
ERBB3-215ENST00000550828 STAB2Q8WWQ8 2551 aa9.74□□□□□ -0.85
ERBB3-215ENST00000550828 C9JCJ5 164 aa9.73□□□□□ -0.85
ERBB3-215ENST00000550828 SH2D1AO60880 128 aa9.73□□□□□ -0.85
ERBB3-215ENST00000550828 AZU1P20160 251 aa9.73□□□□□ -0.85
ERBB3-215ENST00000550828 MUC21Q5SSG8 566 aa9.73□□□□□ -0.85
ERBB3-215ENST00000550828 ZNF575Q86XF7 245 aa9.73□□□□□ -0.85
ERBB3-215ENST00000550828 Q8NAQ8 132 aa9.73□□□□□ -0.85
ERBB3-215ENST00000550828 SMIM7Q9BQ49 75 aa9.73□□□□□ -0.85
ERBB3-215ENST00000550828 C20orf144Q9BQM9 153 aa9.73□□□□□ -0.85
ERBB3-215ENST00000550828 SMDT1Q9H4I9 107 aa9.73□□□□□ -0.85
ERBB3-215ENST00000550828 TP53TG3Q9ULZ0 132 aa9.73□□□□□ -0.85
ERBB3-215ENST00000550828 PLAC8L1A1L4L8 177 aa9.72□□□□□ -0.85
ERBB3-215ENST00000550828 H7BYZ3 331 aa9.72□□□□□ -0.85
ERBB3-215ENST00000550828 GNG4P50150 75 aa9.72□□□□□ -0.85
ERBB3-215ENST00000550828 TMEM256Q8N2U0 113 aa9.72□□□□□ -0.85
ERBB3-215ENST00000550828 EIF4E3Q8N5X7 224 aaKnown RBP9.72□□□□□ -0.85
ERBB3-215ENST00000550828 OCC1Q8TAD7 63 aa9.72□□□□□ -0.85
ERBB3-215ENST00000550828 LINC01587Q99440 93 aa9.72□□□□□ -0.85
ERBB3-215ENST00000550828 TRAV21A0A0B4J279 112 aa9.71□□□□□ -0.86
ERBB3-215ENST00000550828 IGHV4-28A0A0C4DH34 117 aa9.71□□□□□ -0.86
ERBB3-215ENST00000550828 ZNF727A8MUV8 499 aa9.71□□□□□ -0.86
ERBB3-215ENST00000550828 DEFB4AO15263 64 aa9.71□□□□□ -0.86
ERBB3-215ENST00000550828 PFN1P07737 140 aaKnown RBP9.71□□□□□ -0.86
ERBB3-215ENST00000550828 SFTA3P0C7M3 94 aa9.71□□□□□ -0.86
ERBB3-215ENST00000550828 ADCYAP1P18509 176 aa9.71□□□□□ -0.86
ERBB3-215ENST00000550828 OR5I1Q13606 314 aa9.71□□□□□ -0.86
ERBB3-215ENST00000550828 ANXA2RQ3ZCQ2 193 aa9.71□□□□□ -0.86
ERBB3-215ENST00000550828 NEU1Q99519 415 aa9.71□□□□□ -0.86
ERBB3-215ENST00000550828 LINC00467Q9BRT7 94 aa9.71□□□□□ -0.86
ERBB3-215ENST00000550828 NIPSNAP3BQ9BS92 247 aa9.71□□□□□ -0.86
ERBB3-215ENST00000550828 NACAE9PAV3 2078 aa9.71□□□□□ -0.86
ERBB3-215ENST00000550828 IGHV1OR15-1A0A075B7D0 117 aa9.7□□□□□ -0.86
ERBB3-215ENST00000550828 IGKV3D-20A0A0C4DH25 116 aa9.7□□□□□ -0.86
ERBB3-215ENST00000550828 NHLRC4P0CG21 123 aaPredicted RBP9.7□□□□□ -0.86
ERBB3-215ENST00000550828 FAM162BQ5T6X4 162 aa9.7□□□□□ -0.86
ERBB3-215ENST00000550828 PRR27Q6MZM9 219 aa9.7□□□□□ -0.86
ERBB3-215ENST00000550828 RNASE8Q8TDE3 154 aaKnown RBP9.7□□□□□ -0.86
ERBB3-215ENST00000550828 PYGO2Q9BRQ0 406 aa9.7□□□□□ -0.86
ERBB3-215ENST00000550828 TMEM208Q9BTX3 173 aa9.7□□□□□ -0.86
ERBB3-215ENST00000550828 ZMAT4Q9H898 229 aa9.7□□□□□ -0.86
ERBB3-215ENST00000550828 NAGKQ9UJ70 344 aa9.7□□□□□ -0.86
ERBB3-215ENST00000550828 C19orf71A6NCJ1 209 aa9.69□□□□□ -0.86
ERBB3-215ENST00000550828 MGST1P10620 155 aaKnown RBP9.69□□□□□ -0.86
ERBB3-215ENST00000550828 HTN1P15515 57 aa9.69□□□□□ -0.86
ERBB3-215ENST00000550828 RPL19P84098 196 aaKnown RBP9.69□□□□□ -0.86
ERBB3-215ENST00000550828 TDRG1Q3Y452 100 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms