RNA–Protein interactions for RNA: ENST00000550818.1

TSPAN8-205, Transcript of tetraspanin 8, humanhuman

TSL 1 (best)

Gene TSPAN8, Length 627 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN8-205ENST00000550818 CCL4P13236 92 aa1.4□□□□□ -2.19
TSPAN8-205ENST00000550818 DYNLT3P51808 116 aa1.4□□□□□ -2.19
TSPAN8-205ENST00000550818 ARPP19P56211 112 aa1.4□□□□□ -2.19
TSPAN8-205ENST00000550818 LSM3P62310 102 aaKnown RBP1.4□□□□□ -2.19
TSPAN8-205ENST00000550818 Q56UQ5 140 aa1.4□□□□□ -2.19
TSPAN8-205ENST00000550818 CLLU1Q5K131 121 aa1.4□□□□□ -2.19
TSPAN8-205ENST00000550818 Q6AWC8 147 aa1.4□□□□□ -2.19
TSPAN8-205ENST00000550818 C7orf65Q6ZTY9 151 aa1.4□□□□□ -2.19
TSPAN8-205ENST00000550818 Q8N2B8 174 aa1.4□□□□□ -2.19
TSPAN8-205ENST00000550818 TEX29Q8N6K0 151 aa1.4□□□□□ -2.19
TSPAN8-205ENST00000550818 OR8D4Q8NGM9 314 aa1.4□□□□□ -2.19
TSPAN8-205ENST00000550818 DPY30Q9C005 99 aa1.4□□□□□ -2.19
TSPAN8-205ENST00000550818 AGPAT4-IT1Q9H0P7 198 aa1.4□□□□□ -2.19
TSPAN8-205ENST00000550818 SLC35B3Q9H1N7 401 aa1.4□□□□□ -2.19
TSPAN8-205ENST00000550818 EPDR1Q9UM22 224 aa1.4□□□□□ -2.19
TSPAN8-205ENST00000550818 NUMA1Q14980 2115 aa1.4□□□□□ -2.19
TSPAN8-205ENST00000550818 KIF13AQ9H1H9 1805 aa1.4□□□□□ -2.19
TSPAN8-205ENST00000550818 ABCC3O15438 1527 aa1.4□□□□□ -2.19
TSPAN8-205ENST00000550818 N4BP2Q86UW6 1770 aaPredicted RBP1.39□□□□□ -2.19
TSPAN8-205ENST00000550818 CASZ1Q86V15 1759 aa1.39□□□□□ -2.19
TSPAN8-205ENST00000550818 MED1Q15648 1581 aaPredicted RBP1.39□□□□□ -2.19
TSPAN8-205ENST00000550818 THOC2Q8NI27 1593 aaKnown RBP1.39□□□□□ -2.19
TSPAN8-205ENST00000550818 CCDC88BA6NC98 1476 aa1.39□□□□□ -2.19
TSPAN8-205ENST00000550818 POLA1P09884 1462 aaPredicted RBP1.39□□□□□ -2.19
TSPAN8-205ENST00000550818 CFTRP13569 1480 aa1.39□□□□□ -2.19
TSPAN8-205ENST00000550818 MYLKQ15746 1914 aa1.39□□□□□ -2.19
TSPAN8-205ENST00000550818 TRBV10-2A0A0K0K1G8 114 aa1.39□□□□□ -2.19
TSPAN8-205ENST00000550818 H3BQ15 152 aa1.39□□□□□ -2.19
TSPAN8-205ENST00000550818 M0R2P5 195 aa1.39□□□□□ -2.19
TSPAN8-205ENST00000550818 RER1O15258 196 aa1.39□□□□□ -2.19
TSPAN8-205ENST00000550818 KLF7O75840 302 aaPredicted RBP1.39□□□□□ -2.19
TSPAN8-205ENST00000550818 TCRAP04437 139 aa1.39□□□□□ -2.19
TSPAN8-205ENST00000550818 SLC25A5P05141 298 aaKnown RBP1.39□□□□□ -2.19
TSPAN8-205ENST00000550818 CTSDP07339 412 aaPredicted RBP1.39□□□□□ -2.19
TSPAN8-205ENST00000550818 CD14P08571 375 aa1.39□□□□□ -2.19
TSPAN8-205ENST00000550818 SPINK8P0C7L1 97 aa1.39□□□□□ -2.19
TSPAN8-205ENST00000550818 LINC00032P0C843 101 aa1.39□□□□□ -2.19
TSPAN8-205ENST00000550818 IGLC1P0CG04 106 aa1.39□□□□□ -2.19
TSPAN8-205ENST00000550818 IFITM1P13164 125 aa1.39□□□□□ -2.19
TSPAN8-205ENST00000550818 S100A10P60903 97 aa1.39□□□□□ -2.19
TSPAN8-205ENST00000550818 CATR1Q13166 79 aa1.39□□□□□ -2.19
TSPAN8-205ENST00000550818 KLRD1Q13241 179 aa1.39□□□□□ -2.19
TSPAN8-205ENST00000550818 Q6ZS92 163 aa1.39□□□□□ -2.19
TSPAN8-205ENST00000550818 C9orf163Q8N9P6 203 aa1.39□□□□□ -2.19
TSPAN8-205ENST00000550818 OR4B1Q8NGF8 309 aa1.39□□□□□ -2.19
TSPAN8-205ENST00000550818 OR8B3Q8NGG8 313 aa1.39□□□□□ -2.19
TSPAN8-205ENST00000550818 OR5AK2Q8NH90 309 aa1.39□□□□□ -2.19
TSPAN8-205ENST00000550818 STAG3L4Q8TBR4 150 aa1.39□□□□□ -2.19
TSPAN8-205ENST00000550818 BRK1Q8WUW1 75 aa1.39□□□□□ -2.19
TSPAN8-205ENST00000550818 Q96M85 177 aa1.39□□□□□ -2.19
TSPAN8-205ENST00000550818 PRELID3AQ96N28 172 aa1.39□□□□□ -2.19
TSPAN8-205ENST00000550818 AQP10Q96PS8 301 aa1.39□□□□□ -2.19
TSPAN8-205ENST00000550818 CIB3Q96Q77 187 aaPredicted RBP1.39□□□□□ -2.19
TSPAN8-205ENST00000550818 BANF2Q9H503 90 aa1.39□□□□□ -2.19
TSPAN8-205ENST00000550818 SLC39A9Q9NUM3 307 aa1.39□□□□□ -2.19
TSPAN8-205ENST00000550818 DNAJC15Q9Y5T4 150 aa1.39□□□□□ -2.19
TSPAN8-205ENST00000550818 ARHGEF28Q8N1W1 1705 aaKnown RBP1.39□□□□□ -2.19
TSPAN8-205ENST00000550818 MCM3APO60318 1980 aa1.39□□□□□ -2.19
TSPAN8-205ENST00000550818 MYH1P12882 1939 aa1.38□□□□□ -2.19
TSPAN8-205ENST00000550818 FANCAO15360 1455 aa1.38□□□□□ -2.19
TSPAN8-205ENST00000550818 GAPVD1Q14C86 1478 aa1.38□□□□□ -2.19
TSPAN8-205ENST00000550818 RIMBP3CA6NJZ7 1639 aa1.38□□□□□ -2.19
TSPAN8-205ENST00000550818 RIMBP3BA6NNM3 1639 aa1.38□□□□□ -2.19
TSPAN8-205ENST00000550818 RIMBP3Q9UFD9 1639 aa1.38□□□□□ -2.19
TSPAN8-205ENST00000550818 C3orf85A0A1B0GTC6 90 aa1.38□□□□□ -2.19
TSPAN8-205ENST00000550818 LOC107986453A0A1B0GWG9 222 aa1.38□□□□□ -2.19
TSPAN8-205ENST00000550818 A0A1W2PRS3 328 aa1.38□□□□□ -2.19
TSPAN8-205ENST00000550818 APOC4-APOC2K7ER74 178 aa1.38□□□□□ -2.19
TSPAN8-205ENST00000550818 GEMIN2O14893 280 aaKnown RBP1.38□□□□□ -2.19
TSPAN8-205ENST00000550818 TCL1BO95988 128 aa1.38□□□□□ -2.19
TSPAN8-205ENST00000550818 HBDP02042 147 aa1.38□□□□□ -2.19
TSPAN8-205ENST00000550818 APOC2P02655 101 aa1.38□□□□□ -2.19
TSPAN8-205ENST00000550818 PMP2P02689 132 aa1.38□□□□□ -2.19
TSPAN8-205ENST00000550818 CD2P06729 351 aa1.38□□□□□ -2.19
TSPAN8-205ENST00000550818 CXCL1P09341 107 aa1.38□□□□□ -2.19
TSPAN8-205ENST00000550818 ZNF705BP0CI00 300 aaPredicted RBP1.38□□□□□ -2.19
TSPAN8-205ENST00000550818 UBA52P62987 128 aaKnown RBP1.38□□□□□ -2.19
TSPAN8-205ENST00000550818 MRPS36P82909 103 aaKnown RBP1.38□□□□□ -2.19
TSPAN8-205ENST00000550818 Q0VG73 95 aa1.38□□□□□ -2.19
TSPAN8-205ENST00000550818 MIR17HGQ75NE6 70 aa1.38□□□□□ -2.19
TSPAN8-205ENST00000550818 HIST3H2BBQ8N257 126 aa1.38□□□□□ -2.19
TSPAN8-205ENST00000550818 C3orf56Q8N813 242 aa1.38□□□□□ -2.19
TSPAN8-205ENST00000550818 WFDC11Q8NEX6 87 aa1.38□□□□□ -2.19
TSPAN8-205ENST00000550818 CCL4L1Q8NHW4 92 aa1.38□□□□□ -2.19
TSPAN8-205ENST00000550818 OTOSQ8NHW6 89 aa1.38□□□□□ -2.19
TSPAN8-205ENST00000550818 WFDC5Q8TCV5 224 aa1.38□□□□□ -2.19
TSPAN8-205ENST00000550818 RAB37Q96AX2 223 aa1.38□□□□□ -2.19
TSPAN8-205ENST00000550818 HIST1H2BLQ99880 126 aa1.38□□□□□ -2.19
TSPAN8-205ENST00000550818 NAA38Q9BRA0 125 aaKnown RBP1.38□□□□□ -2.19
TSPAN8-205ENST00000550818 GINS4Q9BRT9 223 aa1.38□□□□□ -2.19
TSPAN8-205ENST00000550818 BCL2L10Q9HD36 194 aa1.38□□□□□ -2.19
TSPAN8-205ENST00000550818 OSTCQ9NRP0 149 aa1.38□□□□□ -2.19
TSPAN8-205ENST00000550818 COMMD3Q9UBI1 195 aa1.38□□□□□ -2.19
TSPAN8-205ENST00000550818 NOP16Q9Y3C1 178 aaKnown RBP1.38□□□□□ -2.19
TSPAN8-205ENST00000550818 LINC00312Q9Y6C7 94 aa1.38□□□□□ -2.19
TSPAN8-205ENST00000550818 SERP1Q9Y6X1 66 aa1.38□□□□□ -2.19
TSPAN8-205ENST00000550818 TOPBP1Q92547 1522 aa1.38□□□□□ -2.19
TSPAN8-205ENST00000550818 DISP1Q96F81 1524 aa1.38□□□□□ -2.19
TSPAN8-205ENST00000550818 PPLO60437 1756 aa1.38□□□□□ -2.19
TSPAN8-205ENST00000550818 RBBP6Q7Z6E9 1792 aaKnown RBP1.38□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms