RNA–Protein interactions for RNA: ENST00000549580.1

SNRPF-202, Transcript of small nuclear ribonucleoprotein polypeptide F, humanhuman

TSL 2

Gene SNRPF, Length 757 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPF-202ENST00000549580 HIST1H1AQ02539 215 aaPredicted RBP1.37□□□□□ -2.19
SNRPF-202ENST00000549580 NEDD8Q15843 81 aa1.37□□□□□ -2.19
SNRPF-202ENST00000549580 DEFB115Q30KQ5 88 aa1.37□□□□□ -2.19
SNRPF-202ENST00000549580 CCSMST1Q4G0I0 132 aa1.37□□□□□ -2.19
SNRPF-202ENST00000549580 MMGT1Q8N4V1 131 aa1.37□□□□□ -2.19
SNRPF-202ENST00000549580 C5orf17Q8NAS9 161 aa1.37□□□□□ -2.19
SNRPF-202ENST00000549580 SMIM7Q9BQ49 75 aa1.37□□□□□ -2.19
SNRPF-202ENST00000549580 SIP14410 1827 aa1.37□□□□□ -2.19
SNRPF-202ENST00000549580 ALPK3Q96L96 1907 aa1.36□□□□□ -2.19
SNRPF-202ENST00000549580 IGHV1-24A0A0C4DH33 117 aa1.36□□□□□ -2.19
SNRPF-202ENST00000549580 ZNF727A8MUV8 499 aa1.36□□□□□ -2.19
SNRPF-202ENST00000549580 MPC1LP0DKB6 136 aa1.36□□□□□ -2.19
SNRPF-202ENST00000549580 COX4I1P13073 169 aa1.36□□□□□ -2.19
SNRPF-202ENST00000549580 HLA-DRB4P13762 266 aa1.36□□□□□ -2.19
SNRPF-202ENST00000549580 EVI2AP22794 236 aa1.36□□□□□ -2.19
SNRPF-202ENST00000549580 AKR1D1P51857 326 aa1.36□□□□□ -2.19
SNRPF-202ENST00000549580 IZUMO2Q6UXV1 221 aa1.36□□□□□ -2.19
SNRPF-202ENST00000549580 TMEM91Q6ZNR0 172 aa1.36□□□□□ -2.19
SNRPF-202ENST00000549580 LINC00299Q6ZSB3 139 aa1.36□□□□□ -2.19
SNRPF-202ENST00000549580 C10orf111Q8N326 155 aa1.36□□□□□ -2.19
SNRPF-202ENST00000549580 PLPP5Q8NEB5 264 aa1.36□□□□□ -2.19
SNRPF-202ENST00000549580 OTOSQ8NHW6 89 aa1.36□□□□□ -2.19
SNRPF-202ENST00000549580 TCEAL4Q96EI5 215 aa1.36□□□□□ -2.19
SNRPF-202ENST00000549580 ODF3Q96PU9 254 aa1.36□□□□□ -2.19
SNRPF-202ENST00000549580 SMIM3Q9BZL3 60 aa1.36□□□□□ -2.19
SNRPF-202ENST00000549580 WFDC10AQ9H1F0 79 aa1.36□□□□□ -2.19
SNRPF-202ENST00000549580 METTL1Q9UBP6 276 aaKnown RBP1.36□□□□□ -2.19
SNRPF-202ENST00000549580 HLA-DRB4X5D2U9 266 aa1.36□□□□□ -2.19
SNRPF-202ENST00000549580 COL1A1P02452 1464 aaPredicted RBP1.36□□□□□ -2.19
SNRPF-202ENST00000549580 VIRMAQ69YN4 1812 aaKnown RBP1.36□□□□□ -2.19
SNRPF-202ENST00000549580 USP54Q70EL1 1684 aa1.35□□□□□ -2.19
SNRPF-202ENST00000549580 FGD6Q6ZV73 1430 aa1.35□□□□□ -2.19
SNRPF-202ENST00000549580 J3QR89 54 aa1.35□□□□□ -2.19
SNRPF-202ENST00000549580 M0R2Z0 102 aa1.35□□□□□ -2.19
SNRPF-202ENST00000549580 SULT1C4O75897 302 aa1.35□□□□□ -2.19
SNRPF-202ENST00000549580 CD14P08571 375 aa1.35□□□□□ -2.19
SNRPF-202ENST00000549580 SNRPD3P62318 126 aaKnown RBP1.35□□□□□ -2.19
SNRPF-202ENST00000549580 TCTEX1D1Q8N7M0 179 aa1.35□□□□□ -2.19
SNRPF-202ENST00000549580 MCM3APO60318 1980 aa1.35□□□□□ -2.19
SNRPF-202ENST00000549580 CACNA1BQ00975 2339 aa1.34□□□□□ -2.19
SNRPF-202ENST00000549580 OVOS2A0A0J9YW53 1432 aa1.34□□□□□ -2.19
SNRPF-202ENST00000549580 OVOS2Q6IE36 1432 aa1.34□□□□□ -2.19
SNRPF-202ENST00000549580 CHD3Q12873 2000 aaKnown RBP1.34□□□□□ -2.19
SNRPF-202ENST00000549580 KDELR1P24390 212 aa1.34□□□□□ -2.19
SNRPF-202ENST00000549580 C3orf62Q6ZUJ4 267 aa1.34□□□□□ -2.19
SNRPF-202ENST00000549580 PFDN5Q99471 154 aa1.34□□□□□ -2.19
SNRPF-202ENST00000549580 COMMD3Q9UBI1 195 aa1.34□□□□□ -2.19
SNRPF-202ENST00000549580 ERBINQ96RT1 1412 aa1.33□□□□□ -2.2
SNRPF-202ENST00000549580 TRAV23DV6A0A075B6W5 121 aa1.33□□□□□ -2.2
SNRPF-202ENST00000549580 A0A0J9YY99 117 aa1.33□□□□□ -2.2
SNRPF-202ENST00000549580 A0A1W2PPB8 328 aa1.33□□□□□ -2.2
SNRPF-202ENST00000549580 A0A1W2PRS3 328 aa1.33□□□□□ -2.2
SNRPF-202ENST00000549580 KIR3DP1A8MWS1 328 aa1.33□□□□□ -2.2
SNRPF-202ENST00000549580 YPEL1O60688 119 aa1.33□□□□□ -2.2
SNRPF-202ENST00000549580 RBP4P02753 201 aa1.33□□□□□ -2.2
SNRPF-202ENST00000549580 CD3DP04234 171 aa1.33□□□□□ -2.2
SNRPF-202ENST00000549580 ARL14EPLP0DKL9 152 aa1.33□□□□□ -2.2
SNRPF-202ENST00000549580 NCS1P62166 190 aa1.33□□□□□ -2.2
SNRPF-202ENST00000549580 CCDC58Q4VC31 144 aa1.33□□□□□ -2.2
SNRPF-202ENST00000549580 SPATA45Q537H7 98 aa1.33□□□□□ -2.2
SNRPF-202ENST00000549580 TSTD1Q8NFU3 115 aa1.33□□□□□ -2.2
SNRPF-202ENST00000549580 OR8J3Q8NGG0 315 aa1.33□□□□□ -2.2
SNRPF-202ENST00000549580 FAM107BQ9H098 131 aa1.33□□□□□ -2.2
SNRPF-202ENST00000549580 SLC35B3Q9H1N7 401 aa1.33□□□□□ -2.2
SNRPF-202ENST00000549580 PAIP2BQ9ULR5 123 aaKnown RBP1.33□□□□□ -2.2
SNRPF-202ENST00000549580 DNAJC15Q9Y5T4 150 aa1.33□□□□□ -2.2
SNRPF-202ENST00000549580 MYO18AQ92614 2054 aaKnown RBP1.33□□□□□ -2.2
SNRPF-202ENST00000549580 MYH1P12882 1939 aa1.32□□□□□ -2.2
SNRPF-202ENST00000549580 DISP2A7MBM2 1401 aa1.32□□□□□ -2.2
SNRPF-202ENST00000549580 ARHGAP31Q2M1Z3 1444 aa1.32□□□□□ -2.2
SNRPF-202ENST00000549580 CASP8AP2Q9UKL3 1982 aa1.32□□□□□ -2.2
SNRPF-202ENST00000549580 IGLC6P0CF74 106 aa1.32□□□□□ -2.2
SNRPF-202ENST00000549580 PLGLB1Q02325 96 aa1.32□□□□□ -2.2
SNRPF-202ENST00000549580 GLYATL3Q5SZD4 288 aa1.32□□□□□ -2.2
SNRPF-202ENST00000549580 BOKQ9UMX3 212 aaPredicted RBP1.32□□□□□ -2.2
SNRPF-202ENST00000549580 KDM5CP41229 1560 aa1.32□□□□□ -2.2
SNRPF-202ENST00000549580 UNC13CQ8NB66 2214 aa1.32□□□□□ -2.2
SNRPF-202ENST00000549580 IDO2Q6ZQW0 420 aa1.31□□□□□ -2.2
SNRPF-202ENST00000549580 CTAGE3PQ8IX95 158 aa1.31□□□□□ -2.2
SNRPF-202ENST00000549580 LIMD2Q9BT23 127 aa1.31□□□□□ -2.2
SNRPF-202ENST00000549580 LPAR5Q9H1C0 372 aa1.31□□□□□ -2.2
SNRPF-202ENST00000549580 FANCMQ8IYD8 2048 aa1.31□□□□□ -2.2
SNRPF-202ENST00000549580 KIAA1549LQ6ZVL6 1849 aa1.31□□□□□ -2.2
SNRPF-202ENST00000549580 SOGA1O94964 1423 aa1.31□□□□□ -2.2
SNRPF-202ENST00000549580 SIPA1L2Q9P2F8 1722 aaPredicted RBP1.3□□□□□ -2.2
SNRPF-202ENST00000549580 COL6A6A6NMZ7 2263 aa1.3□□□□□ -2.2
SNRPF-202ENST00000549580 A6NN06 94 aa1.3□□□□□ -2.2
SNRPF-202ENST00000549580 K7ERU9 68 aa1.3□□□□□ -2.2
SNRPF-202ENST00000549580 CDC42EP2O14613 210 aa1.3□□□□□ -2.2
SNRPF-202ENST00000549580 IGLV3-1P01715 115 aa1.3□□□□□ -2.2
SNRPF-202ENST00000549580 TSPAN19P0C672 248 aa1.3□□□□□ -2.2
SNRPF-202ENST00000549580 CLLU1Q5K131 121 aa1.3□□□□□ -2.2
SNRPF-202ENST00000549580 OR10AC1Q8NH08 325 aa1.3□□□□□ -2.2
SNRPF-202ENST00000549580 AMELYQ99218 206 aa1.3□□□□□ -2.2
SNRPF-202ENST00000549580 TPT1P8Q9HAU6 139 aa1.3□□□□□ -2.2
SNRPF-202ENST00000549580 C22orf24Q9Y442 160 aa1.3□□□□□ -2.2
SNRPF-202ENST00000549580 HELZ2Q9BYK8 2649 aaKnown RBP1.3□□□□□ -2.2
SNRPF-202ENST00000549580 TECTAO75443 2155 aa1.3□□□□□ -2.2
SNRPF-202ENST00000549580 CDK5RAP2Q96SN8 1893 aa1.29□□□□□ -2.2
SNRPF-202ENST00000549580 PTPRDP23468 1912 aa1.29□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 79.3 ms