RNA–Protein interactions for RNA: ENST00000549505.5

RAB5B-206, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 1 (best)

Gene RAB5B, Length 3,148 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-206ENST00000549505 PF4V1P10720 104 aa7.56□□□□□ -1.2
RAB5B-206ENST00000549505 VAMP3Q15836 100 aa7.56□□□□□ -1.2
RAB5B-206ENST00000549505 COL5A1-AS1Q5SY13 56 aa7.56□□□□□ -1.2
RAB5B-206ENST00000549505 FAM104BQ5XKR9 115 aa7.56□□□□□ -1.2
RAB5B-206ENST00000549505 DCANP1Q8TF63 244 aa7.56□□□□□ -1.2
RAB5B-206ENST00000549505 Q96MF0 132 aa7.56□□□□□ -1.2
RAB5B-206ENST00000549505 C20orf144Q9BQM9 153 aa7.56□□□□□ -1.2
RAB5B-206ENST00000549505 SPINK4O60575 86 aa7.55□□□□□ -1.2
RAB5B-206ENST00000549505 KRTAP1-1Q07627 177 aa7.55□□□□□ -1.2
RAB5B-206ENST00000549505 IL17RELQ6ZVW7 336 aa7.55□□□□□ -1.2
RAB5B-206ENST00000549505 ZFAND2AQ8N6M9 145 aa7.55□□□□□ -1.2
RAB5B-206ENST00000549505 POM121L12Q8N7R1 296 aa7.55□□□□□ -1.2
RAB5B-206ENST00000549505 KMT2BQ9UMN6 2715 aaPredicted RBP7.55□□□□□ -1.2
RAB5B-206ENST00000549505 A1L4Q6 167 aa7.55□□□□□ -1.2
RAB5B-206ENST00000549505 LYZL1Q6UWQ5 148 aa7.55□□□□□ -1.2
RAB5B-206ENST00000549505 SIGLECL1Q8N7X8 197 aa7.55□□□□□ -1.2
RAB5B-206ENST00000549505 SCRT2Q9NQ03 307 aa7.55□□□□□ -1.2
RAB5B-206ENST00000549505 LINC00527Q9UJ94 153 aa7.55□□□□□ -1.2
RAB5B-206ENST00000549505 CHTOPQ9Y3Y2 248 aaKnown RBP7.55□□□□□ -1.2
RAB5B-206ENST00000549505 TMEM238LA0A1B0GVL6 79 aa7.54□□□□□ -1.2
RAB5B-206ENST00000549505 NXPH4O95158 308 aa7.54□□□□□ -1.2
RAB5B-206ENST00000549505 KIAA1644Q3SXP7 199 aa7.54□□□□□ -1.2
RAB5B-206ENST00000549505 TMEM78Q5T7P6 136 aa7.54□□□□□ -1.2
RAB5B-206ENST00000549505 RNF182Q8N6D2 247 aa7.54□□□□□ -1.2
RAB5B-206ENST00000549505 FER1L6-AS1Q8NA97 138 aa7.54□□□□□ -1.2
RAB5B-206ENST00000549505 BORCS7Q96B45 105 aa7.54□□□□□ -1.2
RAB5B-206ENST00000549505 IGKV3D-20A0A0C4DH25 116 aa7.54□□□□□ -1.2
RAB5B-206ENST00000549505 TMEM213A2RRL7 107 aa7.54□□□□□ -1.2
RAB5B-206ENST00000549505 J3QKU1 62 aa7.54□□□□□ -1.2
RAB5B-206ENST00000549505 ERCC8Q13216 396 aa7.54□□□□□ -1.2
RAB5B-206ENST00000549505 RHPN1-AS1Q9BWJ2 59 aa7.54□□□□□ -1.2
RAB5B-206ENST00000549505 C2orf70A6NJV1 201 aa7.54□□□□□ -1.2
RAB5B-206ENST00000549505 KLLNB2CW77 178 aa7.54□□□□□ -1.2
RAB5B-206ENST00000549505 PPBPP02775 128 aa7.54□□□□□ -1.2
RAB5B-206ENST00000549505 CACNG7P62955 275 aa7.54□□□□□ -1.2
RAB5B-206ENST00000549505 ATOH7Q8N100 152 aa7.54□□□□□ -1.2
RAB5B-206ENST00000549505 USP9XQ93008 2570 aaPredicted RBP7.54□□□□□ -1.2
RAB5B-206ENST00000549505 TACC2O95359 2948 aa7.53□□□□□ -1.2
RAB5B-206ENST00000549505 SPATA12Q7Z6I5 190 aa7.53□□□□□ -1.2
RAB5B-206ENST00000549505 C16orf92Q96LL3 132 aa7.53□□□□□ -1.2
RAB5B-206ENST00000549505 IGHV3-35A0A0C4DH35 117 aa7.53□□□□□ -1.2
RAB5B-206ENST00000549505 CD5LO43866 347 aa7.53□□□□□ -1.2
RAB5B-206ENST00000549505 CAMPP49913 170 aa7.53□□□□□ -1.2
RAB5B-206ENST00000549505 Q8TAT8 98 aa7.53□□□□□ -1.2
RAB5B-206ENST00000549505 RNF185Q96GF1 192 aa7.53□□□□□ -1.2
RAB5B-206ENST00000549505 CSTL1Q9H114 145 aa7.53□□□□□ -1.2
RAB5B-206ENST00000549505 C11orf21Q9P2W6 132 aa7.53□□□□□ -1.2
RAB5B-206ENST00000549505 HOXA3O43365 443 aaPredicted RBP7.52□□□□□ -1.21
RAB5B-206ENST00000549505 C16orf95Q9H693 158 aa7.52□□□□□ -1.21
RAB5B-206ENST00000549505 RNF114Q9Y508 228 aa7.52□□□□□ -1.21
RAB5B-206ENST00000549505 IGFL4Q6B9Z1 124 aa7.52□□□□□ -1.21
RAB5B-206ENST00000549505 OR8A1Q8NGG7 326 aa7.52□□□□□ -1.21
RAB5B-206ENST00000549505 C4orf3Q8WVX3 66 aa7.52□□□□□ -1.21
RAB5B-206ENST00000549505 TP73-AS1Q9UF72 201 aa7.52□□□□□ -1.21
RAB5B-206ENST00000549505 FAM181BA6NEQ2 426 aa7.52□□□□□ -1.21
RAB5B-206ENST00000549505 K7EQG2 157 aa7.52□□□□□ -1.21
RAB5B-206ENST00000549505 VAMP8Q9BV40 100 aa7.52□□□□□ -1.21
RAB5B-206ENST00000549505 IGHV3OR16-8A0A075B7F1 116 aa7.51□□□□□ -1.21
RAB5B-206ENST00000549505 ID1P41134 155 aa7.51□□□□□ -1.21
RAB5B-206ENST00000549505 Q6ZN92 141 aa7.51□□□□□ -1.21
RAB5B-206ENST00000549505 OR10J6PQ8NGY7 276 aa7.51□□□□□ -1.21
RAB5B-206ENST00000549505 SAMD10Q9BYL1 202 aa7.51□□□□□ -1.21
RAB5B-206ENST00000549505 AMTP48728 403 aa7.51□□□□□ -1.21
RAB5B-206ENST00000549505 TM4SF20Q53R12 229 aa7.51□□□□□ -1.21
RAB5B-206ENST00000549505 FLNCQ14315 2725 aa7.51□□□□□ -1.21
RAB5B-206ENST00000549505 TRAV21A0A0B4J279 112 aa7.5□□□□□ -1.21
RAB5B-206ENST00000549505 IGHV3-66A0A0C4DH42 116 aa7.5□□□□□ -1.21
RAB5B-206ENST00000549505 ZNF207O43670 478 aaKnown RBP7.5□□□□□ -1.21
RAB5B-206ENST00000549505 SAP30O75446 220 aa7.5□□□□□ -1.21
RAB5B-206ENST00000549505 C3orf79P0CE67 100 aa7.5□□□□□ -1.21
RAB5B-206ENST00000549505 PMCHL1Q16048 86 aa7.5□□□□□ -1.21
RAB5B-206ENST00000549505 CACNA1BQ00975 2339 aa7.5□□□□□ -1.21
RAB5B-206ENST00000549505 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7.5□□□□□ -1.211e-6■■■□□ 19.2
RAB5B-206ENST00000549505 IGHV1-24A0A0C4DH33 117 aa7.5□□□□□ -1.21
RAB5B-206ENST00000549505 IGHV3-11P01762 117 aa7.5□□□□□ -1.21
RAB5B-206ENST00000549505 KRTDAPP60985 99 aa7.5□□□□□ -1.21
RAB5B-206ENST00000549505 TMEM95Q3KNT9 176 aa7.5□□□□□ -1.21
RAB5B-206ENST00000549505 MRPL51Q4U2R6 128 aaKnown RBP7.5□□□□□ -1.21
RAB5B-206ENST00000549505 ORMDL3Q8N138 153 aa7.5□□□□□ -1.21
RAB5B-206ENST00000549505 MIEN1Q9BRT3 115 aa7.5□□□□□ -1.21
RAB5B-206ENST00000549505 PRR9Q5T870 116 aa7.49□□□□□ -1.21
RAB5B-206ENST00000549505 ZNF738Q8NE65 137 aa7.49□□□□□ -1.21
RAB5B-206ENST00000549505 SIGLEC8Q9NYZ4 499 aa7.49□□□□□ -1.21
RAB5B-206ENST00000549505 NTF3P20783 257 aa7.49□□□□□ -1.21
RAB5B-206ENST00000549505 UBE2V1Q13404 147 aa7.49□□□□□ -1.21
RAB5B-206ENST00000549505 EBLN2Q6P2I7 272 aa7.49□□□□□ -1.21
RAB5B-206ENST00000549505 HSBP1O75506 76 aa7.49□□□□□ -1.21
RAB5B-206ENST00000549505 KIR3DS1Q14943 382 aa7.49□□□□□ -1.21
RAB5B-206ENST00000549505 OCIAD2Q56VL3 154 aa7.49□□□□□ -1.21
RAB5B-206ENST00000549505 CFAP161Q6P656 301 aa7.49□□□□□ -1.21
RAB5B-206ENST00000549505 CST9LQ9H4G1 147 aa7.49□□□□□ -1.21
RAB5B-206ENST00000549505 HNRNPA3P51991 378 aaKnown RBP7.48□□□□□ -1.21
RAB5B-206ENST00000549505 ADAMTSL5Q6ZMM2 481 aa7.48□□□□□ -1.21
RAB5B-206ENST00000549505 MAPK1IP1LQ8NDC0 245 aa7.48□□□□□ -1.21
RAB5B-206ENST00000549505 SPTBN1Q01082 2364 aaKnown RBP7.48□□□□□ -1.21
RAB5B-206ENST00000549505 IGHV4OR15-8A0A075B7B6 117 aa7.48□□□□□ -1.21
RAB5B-206ENST00000549505 A0A087WW49 117 aa7.48□□□□□ -1.21
RAB5B-206ENST00000549505 RPL32P62910 135 aaKnown RBP7.48□□□□□ -1.21
RAB5B-206ENST00000549505 FHL3Q13643 280 aa7.48□□□□□ -1.21
RAB5B-206ENST00000549505 C10orf99Q6UWK7 81 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 102.4 ms