RNA–Protein interactions for RNA: ENST00000549243.5

SLC48A1-207, Transcript of solute carrier family 48 member 1, humanhuman

TSL 3

Gene SLC48A1, Length 577 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC48A1-207ENST00000549243 MRPL16Q9NX20 251 aaKnown RBP13.54□□□□□ -0.24
SLC48A1-207ENST00000549243 SPINK4O60575 86 aa13.53□□□□□ -0.24
SLC48A1-207ENST00000549243 IGHV3-53P01767 116 aa13.53□□□□□ -0.24
SLC48A1-207ENST00000549243 MUC21Q5SSG8 566 aa13.53□□□□□ -0.24
SLC48A1-207ENST00000549243 IBA57Q5T440 356 aaKnown RBP13.53□□□□□ -0.24
SLC48A1-207ENST00000549243 HYLS1Q96M11 299 aa13.53□□□□□ -0.24
SLC48A1-207ENST00000549243 KRTAP1-5Q9BYS1 174 aa13.53□□□□□ -0.24
SLC48A1-207ENST00000549243 TAS2R45P59539 299 aa13.52□□□□□ -0.25
SLC48A1-207ENST00000549243 LYPD1Q8N2G4 141 aa13.52□□□□□ -0.25
SLC48A1-207ENST00000549243 C18orf15Q96N68 181 aa13.52□□□□□ -0.25
SLC48A1-207ENST00000549243 RPH3ALQ9UNE2 315 aa13.52□□□□□ -0.25
SLC48A1-207ENST00000549243 PCLOQ9Y6V0 5065 aa13.51□□□□□ -0.25
SLC48A1-207ENST00000549243 A0A096LPF7 62 aa13.51□□□□□ -0.25
SLC48A1-207ENST00000549243 RBAKDNA6NC62 111 aa13.51□□□□□ -0.25
SLC48A1-207ENST00000549243 MRPS16Q9Y3D3 137 aaKnown RBP13.51□□□□□ -0.25
SLC48A1-207ENST00000549243 TRBV7-9A0A0J9YWB2 115 aa13.5□□□□□ -0.25
SLC48A1-207ENST00000549243 DIRC3C9JPN6 131 aa13.5□□□□□ -0.25
SLC48A1-207ENST00000549243 ZNF415Q09FC8 603 aa13.5□□□□□ -0.25
SLC48A1-207ENST00000549243 TTC32Q5I0X7 151 aa13.5□□□□□ -0.25
SLC48A1-207ENST00000549243 ST6GAL2Q96JF0 529 aa13.5□□□□□ -0.25
SLC48A1-207ENST00000549243 UPK3BQ9BT76 320 aa13.5□□□□□ -0.25
SLC48A1-207ENST00000549243 ALG5Q9Y673 324 aa13.5□□□□□ -0.25
SLC48A1-207ENST00000549243 PAX4O43316 350 aa13.49□□□□□ -0.25
SLC48A1-207ENST00000549243 RAB2AP61019 212 aa13.49□□□□□ -0.25
SLC48A1-207ENST00000549243 ZNF266Q14584 549 aa13.49□□□□□ -0.25
SLC48A1-207ENST00000549243 A0A1W2PPV4 95 aa13.48□□□□□ -0.25
SLC48A1-207ENST00000549243 PGPA6NDG6 321 aa13.48□□□□□ -0.25
SLC48A1-207ENST00000549243 C16orf90A8MZG2 172 aa13.48□□□□□ -0.25
SLC48A1-207ENST00000549243 HMGB3O15347 200 aaKnown RBP13.48□□□□□ -0.25
SLC48A1-207ENST00000549243 ACOT6Q3I5F7 207 aaPredicted RBP13.48□□□□□ -0.25
SLC48A1-207ENST00000549243 OTORQ9NRC9 128 aa13.48□□□□□ -0.25
SLC48A1-207ENST00000549243 MDFICQ9P1T7 246 aa13.48□□□□□ -0.25
SLC48A1-207ENST00000549243 TMEM183BQ1AE95 376 aa13.47□□□□□ -0.25
SLC48A1-207ENST00000549243 TMEM183AQ8IXX5 376 aa13.47□□□□□ -0.25
SLC48A1-207ENST00000549243 CMTM2Q8TAZ6 248 aa13.47□□□□□ -0.25
SLC48A1-207ENST00000549243 C8orf49Q96NF6 230 aa13.47□□□□□ -0.25
SLC48A1-207ENST00000549243 ICOSQ9Y6W8 199 aa13.47□□□□□ -0.25
SLC48A1-207ENST00000549243 GOLT1AQ6ZVE7 132 aa13.46□□□□□ -0.25
SLC48A1-207ENST00000549243 NAGKQ9UJ70 344 aa13.46□□□□□ -0.25
SLC48A1-207ENST00000549243 FAM74A1Q5RGS3 127 aa13.45□□□□□ -0.26
SLC48A1-207ENST00000549243 Q6AWC8 147 aa13.45□□□□□ -0.26
SLC48A1-207ENST00000549243 FAM159AQ6UWV7 190 aa13.45□□□□□ -0.26
SLC48A1-207ENST00000549243 PQLC2Q6ZP29 291 aa13.45□□□□□ -0.26
SLC48A1-207ENST00000549243 OR10G4Q8NGN3 311 aa13.45□□□□□ -0.26
SLC48A1-207ENST00000549243 OR10G9Q8NGN4 311 aa13.45□□□□□ -0.26
SLC48A1-207ENST00000549243 OR10G7Q8NGN6 311 aa13.45□□□□□ -0.26
SLC48A1-207ENST00000549243 PRO0255Q9UI72 69 aa13.45□□□□□ -0.26
SLC48A1-207ENST00000549243 LENEPQ9Y5L5 61 aa13.45□□□□□ -0.26
SLC48A1-207ENST00000549243 SFTA3P0C7M3 94 aa13.44□□□□□ -0.26
SLC48A1-207ENST00000549243 CRYBA4P53673 196 aa13.44□□□□□ -0.26
SLC48A1-207ENST00000549243 GNG5P63218 68 aa13.44□□□□□ -0.26
SLC48A1-207ENST00000549243 FHL2Q14192 279 aa13.44□□□□□ -0.26
SLC48A1-207ENST00000549243 HSD17B11Q8NBQ5 300 aa13.44□□□□□ -0.26
SLC48A1-207ENST00000549243 BATF3Q9NR55 127 aa13.44□□□□□ -0.26
SLC48A1-207ENST00000549243 HHLA3Q9XRX5 114 aa13.44□□□□□ -0.26
SLC48A1-207ENST00000549243 TRAV8-1A0A0A6YYK1 113 aa13.43□□□□□ -0.26
SLC48A1-207ENST00000549243 TRGV4A0A0C4DH28 118 aa13.43□□□□□ -0.26
SLC48A1-207ENST00000549243 A0A1W2PPQ1 181 aa13.43□□□□□ -0.26
SLC48A1-207ENST00000549243 F6UZH7 168 aa13.43□□□□□ -0.26
SLC48A1-207ENST00000549243 TMED6Q8WW62 240 aa13.43□□□□□ -0.26
SLC48A1-207ENST00000549243 RYR1P21817 5038 aa13.43□□□□□ -0.26
SLC48A1-207ENST00000549243 TRGV11A0A075B6L2 103 aa13.42□□□□□ -0.26
SLC48A1-207ENST00000549243 SIVA1O15304 175 aa13.42□□□□□ -0.26
SLC48A1-207ENST00000549243 NXPH4O95158 308 aa13.42□□□□□ -0.26
SLC48A1-207ENST00000549243 ARL14EPLP0DKL9 152 aa13.42□□□□□ -0.26
SLC48A1-207ENST00000549243 SPATA12Q7Z6I5 190 aa13.42□□□□□ -0.26
SLC48A1-207ENST00000549243 ZNF479Q96JC4 524 aa13.42□□□□□ -0.26
SLC48A1-207ENST00000549243 GNRH2O43555 120 aa13.41□□□□□ -0.26
SLC48A1-207ENST00000549243 CDC34P49427 236 aaPredicted RBP13.41□□□□□ -0.26
SLC48A1-207ENST00000549243 SLAQ13239 276 aa13.41□□□□□ -0.26
SLC48A1-207ENST00000549243 TVP23CQ96ET8 276 aa13.41□□□□□ -0.26
SLC48A1-207ENST00000549243 SGK494Q96LW2 274 aa13.41□□□□□ -0.26
SLC48A1-207ENST00000549243 SPXQ9BT56 116 aa13.41□□□□□ -0.26
SLC48A1-207ENST00000549243 MED28Q9H204 178 aa13.41□□□□□ -0.26
SLC48A1-207ENST00000549243 LINC00315P59091 139 aa13.4□□□□□ -0.26
SLC48A1-207ENST00000549243 MRPL23Q16540 153 aaKnown RBP13.4□□□□□ -0.26
SLC48A1-207ENST00000549243 TREM1Q9NP99 234 aa13.4□□□□□ -0.26
SLC48A1-207ENST00000549243 PTTG1O95997 202 aa13.39□□□□□ -0.27
SLC48A1-207ENST00000549243 ATP6V0CP27449 155 aa13.39□□□□□ -0.27
SLC48A1-207ENST00000549243 LYPD5Q6UWN5 251 aa13.39□□□□□ -0.27
SLC48A1-207ENST00000549243 RASL10AQ92737 203 aa13.39□□□□□ -0.27
SLC48A1-207ENST00000549243 RAB24Q969Q5 203 aa13.39□□□□□ -0.27
SLC48A1-207ENST00000549243 TRAV21A0A0B4J279 112 aa13.38□□□□□ -0.27
SLC48A1-207ENST00000549243 STAG3L2P0CL84 134 aa13.38□□□□□ -0.27
SLC48A1-207ENST00000549243 STAG3L3P0CL85 134 aa13.38□□□□□ -0.27
SLC48A1-207ENST00000549243 TDRG1Q3Y452 100 aa13.38□□□□□ -0.27
SLC48A1-207ENST00000549243 Q5BKY6 102 aa13.38□□□□□ -0.27
SLC48A1-207ENST00000549243 NEGR1Q7Z3B1 354 aa13.38□□□□□ -0.27
SLC48A1-207ENST00000549243 OR2G3Q8NGZ4 309 aa13.38□□□□□ -0.27
SLC48A1-207ENST00000549243 AQP10Q96PS8 301 aa13.38□□□□□ -0.27
SLC48A1-207ENST00000549243 LRP1BQ9NZR2 4599 aa13.37□□□□□ -0.27
SLC48A1-207ENST00000549243 IGHV3-16A0A0C4DH30 117 aa13.37□□□□□ -0.27
SLC48A1-207ENST00000549243 K7EQD1 137 aa13.37□□□□□ -0.27
SLC48A1-207ENST00000549243 TYMSP04818 313 aa13.37□□□□□ -0.27
SLC48A1-207ENST00000549243 SRIP30626 198 aa13.37□□□□□ -0.27
SLC48A1-207ENST00000549243 ARL6IP6Q8N6S5 226 aa13.37□□□□□ -0.27
SLC48A1-207ENST00000549243 PCNPQ8WW12 178 aaKnown RBP13.37□□□□□ -0.27
SLC48A1-207ENST00000549243 PSMG3Q9BT73 122 aaPredicted RBP13.37□□□□□ -0.27
SLC48A1-207ENST00000549243 KRTAP4-5Q9BYR2 181 aa13.37□□□□□ -0.27
SLC48A1-207ENST00000549243 SH3BGRL3Q9H299 93 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 78.1 ms