RNA–Protein interactions for RNA: ENST00000548860.5

CACNB3-209, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 2

Gene CACNB3, Length 4,029 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-209ENST00000548860 FAM104BQ5XKR9 115 aa11.08□□□□□ -0.64
CACNB3-209ENST00000548860 RASL11AQ6T310 242 aa11.08□□□□□ -0.64
CACNB3-209ENST00000548860 H3BUX3 64 aa11.08□□□□□ -0.64
CACNB3-209ENST00000548860 NEU4Q8WWR8 484 aaPredicted RBP11.08□□□□□ -0.64
CACNB3-209ENST00000548860 FAM231BA6NCW3 169 aa11.07□□□□□ -0.64
CACNB3-209ENST00000548860 HIST2H2BDQ6DRA6 164 aa11.07□□□□□ -0.64
CACNB3-209ENST00000548860 CIDEAO60543 219 aa11.07□□□□□ -0.64
CACNB3-209ENST00000548860 TMEM95Q3KNT9 176 aa11.07□□□□□ -0.64
CACNB3-209ENST00000548860 GTF2H5Q6ZYL4 71 aa11.07□□□□□ -0.64
CACNB3-209ENST00000548860 Q8N976 141 aa11.07□□□□□ -0.64
CACNB3-209ENST00000548860 FANCD2OSQ96PS1 177 aa11.07□□□□□ -0.64
CACNB3-209ENST00000548860 ZNF747Q9BV97 191 aa11.07□□□□□ -0.64
CACNB3-209ENST00000548860 SPCS1Q9Y6A9 102 aa11.07□□□□□ -0.64
CACNB3-209ENST00000548860 IGHV3-73A0A0B4J1V6 119 aa11.07□□□□□ -0.64
CACNB3-209ENST00000548860 A0A087WWL8 130 aa11.06□□□□□ -0.64
CACNB3-209ENST00000548860 PEF1Q9UBV8 284 aaKnown RBP11.06□□□□□ -0.64
CACNB3-209ENST00000548860 TNFRSF6BO95407 300 aa11.06□□□□□ -0.64
CACNB3-209ENST00000548860 APOMO95445 188 aa11.06□□□□□ -0.64
CACNB3-209ENST00000548860 CTSGP08311 255 aa11.06□□□□□ -0.64
CACNB3-209ENST00000548860 PLP1P60201 277 aa11.06□□□□□ -0.64
CACNB3-209ENST00000548860 BVES-AS1Q5T3Y7 98 aa11.06□□□□□ -0.64
CACNB3-209ENST00000548860 ZNF492Q9P255 531 aa11.06□□□□□ -0.64
CACNB3-209ENST00000548860 ZNF688P0C7X2 276 aa11.06□□□□□ -0.64
CACNB3-209ENST00000548860 SCGB1C2P0DMR2 95 aa11.06□□□□□ -0.64
CACNB3-209ENST00000548860 MLST8Q9BVC4 326 aa11.06□□□□□ -0.64
CACNB3-209ENST00000548860 URB1-AS1Q96HZ7 61 aa11.06□□□□□ -0.64
CACNB3-209ENST00000548860 SCGB3A1Q96QR1 104 aa11.06□□□□□ -0.64
CACNB3-209ENST00000548860 MRPS16Q9Y3D3 137 aaKnown RBP11.06□□□□□ -0.64
CACNB3-209ENST00000548860 PRRC2AP48634 2157 aaKnown RBP11.05□□□□□ -0.64
CACNB3-209ENST00000548860 C19orf71A6NCJ1 209 aa11.05□□□□□ -0.64
CACNB3-209ENST00000548860 HAX1O00165 279 aa11.05□□□□□ -0.64
CACNB3-209ENST00000548860 PAX8Q06710 450 aa11.05□□□□□ -0.64
CACNB3-209ENST00000548860 KIR3DS1Q14943 382 aa11.05□□□□□ -0.64
CACNB3-209ENST00000548860 CD300EQ496F6 205 aaPredicted RBP11.05□□□□□ -0.64
CACNB3-209ENST00000548860 CFHR4Q92496 578 aa11.05□□□□□ -0.64
CACNB3-209ENST00000548860 IGHV7-81A0A0B4J1V7 117 aa11.05□□□□□ -0.64
CACNB3-209ENST00000548860 GAGE12BA1L429 117 aa11.05□□□□□ -0.64
CACNB3-209ENST00000548860 CRYGCP07315 174 aa11.05□□□□□ -0.64
CACNB3-209ENST00000548860 FABP2P12104 132 aa11.05□□□□□ -0.64
CACNB3-209ENST00000548860 IGF1P05019 195 aa11.05□□□□□ -0.64
CACNB3-209ENST00000548860 ESDP10768 282 aa11.04□□□□□ -0.64
CACNB3-209ENST00000548860 ORAOV1Q8WV07 137 aa11.04□□□□□ -0.64
CACNB3-209ENST00000548860 AGPAT4-IT1Q9H0P7 198 aa11.04□□□□□ -0.64
CACNB3-209ENST00000548860 K7ERU9 68 aa11.04□□□□□ -0.64
CACNB3-209ENST00000548860 OVOL3O00110 214 aa11.04□□□□□ -0.64
CACNB3-209ENST00000548860 ADORA2A-AS1P86434 159 aa11.04□□□□□ -0.64
CACNB3-209ENST00000548860 TMEM170BQ5T4T1 132 aa11.04□□□□□ -0.64
CACNB3-209ENST00000548860 KLF12Q9Y4X4 402 aa11.04□□□□□ -0.64
CACNB3-209ENST00000548860 TRAV41A0A0B4J266 112 aa11.04□□□□□ -0.64
CACNB3-209ENST00000548860 A0A1B0GXF2 115 aa11.04□□□□□ -0.64
CACNB3-209ENST00000548860 CTRLP40313 264 aa11.04□□□□□ -0.64
CACNB3-209ENST00000548860 Q1RN00 199 aa11.04□□□□□ -0.64
CACNB3-209ENST00000548860 C3orf36Q3SXR2 165 aa11.04□□□□□ -0.64
CACNB3-209ENST00000548860 CYSLTR1Q9Y271 337 aa11.04□□□□□ -0.64
CACNB3-209ENST00000548860 NPFFO15130 113 aa11.03□□□□□ -0.64
CACNB3-209ENST00000548860 TRBV12-3P01733 135 aa11.03□□□□□ -0.64
CACNB3-209ENST00000548860 RPS20P60866 119 aaKnown RBP11.03□□□□□ -0.64
CACNB3-209ENST00000548860 DTX2Q86UW9 622 aa11.03□□□□□ -0.64
CACNB3-209ENST00000548860 LINC00574Q9H8X3 128 aa11.03□□□□□ -0.64
CACNB3-209ENST00000548860 DCHS2Q6V1P9 2916 aa11.03□□□□□ -0.64
CACNB3-209ENST00000548860 TRAV12-3A0A0B4J271 114 aa11.03□□□□□ -0.64
CACNB3-209ENST00000548860 CD7P09564 240 aa11.03□□□□□ -0.64
CACNB3-209ENST00000548860 ZNF56Q15929 161 aa11.03□□□□□ -0.64
CACNB3-209ENST00000548860 A0A0G2JLM5 398 aa11.02□□□□□ -0.64
CACNB3-209ENST00000548860 TMEM8BA6NDV4 472 aa11.02□□□□□ -0.64
CACNB3-209ENST00000548860 BLCAPP62952 87 aa11.02□□□□□ -0.64
CACNB3-209ENST00000548860 KLF5Q13887 457 aaPredicted RBP11.02□□□□□ -0.64
CACNB3-209ENST00000548860 Q6AWC8 147 aa11.02□□□□□ -0.64
CACNB3-209ENST00000548860 TRAV12-2A0A075B6T6 113 aa11.02□□□□□ -0.65
CACNB3-209ENST00000548860 OR2K2Q8NGT1 345 aa11.02□□□□□ -0.65
CACNB3-209ENST00000548860 BEX4Q9NWD9 120 aaPredicted RBP11.02□□□□□ -0.65
CACNB3-209ENST00000548860 SAP30O75446 220 aa11.02□□□□□ -0.65
CACNB3-209ENST00000548860 C8orf86Q6ZUL3 223 aa11.02□□□□□ -0.65
CACNB3-209ENST00000548860 COL25A1Q9BXS0 654 aaPredicted RBP11.02□□□□□ -0.65
CACNB3-209ENST00000548860 PRSS22Q9GZN4 317 aa11.02□□□□□ -0.65
CACNB3-209ENST00000548860 AMTNQ6UX39 209 aa11.01□□□□□ -0.65
CACNB3-209ENST00000548860 CCL19Q99731 98 aa11.01□□□□□ -0.65
CACNB3-209ENST00000548860 IGKV3D-20A0A0C4DH25 116 aa11.01□□□□□ -0.65
CACNB3-209ENST00000548860 SMIM13P0DJ93 91 aa11.01□□□□□ -0.65
CACNB3-209ENST00000548860 FAM159AQ6UWV7 190 aa11.01□□□□□ -0.65
CACNB3-209ENST00000548860 ZNF418Q8TF45 676 aaPredicted RBP11.01□□□□□ -0.65
CACNB3-209ENST00000548860 GFRA4Q9GZZ7 299 aa11.01□□□□□ -0.65
CACNB3-209ENST00000548860 MRPL35Q9NZE8 188 aaKnown RBP11.01□□□□□ -0.65
CACNB3-209ENST00000548860 IGLV11-55A0A075B6I3 123 aa11.01□□□□□ -0.65
CACNB3-209ENST00000548860 GNRH2O43555 120 aa11.01□□□□□ -0.65
CACNB3-209ENST00000548860 IGLV2-11P01706 119 aa11.01□□□□□ -0.65
CACNB3-209ENST00000548860 CT83Q5H943 113 aa11.01□□□□□ -0.65
CACNB3-209ENST00000548860 TMEM14CQ9P0S9 112 aa11.01□□□□□ -0.65
CACNB3-209ENST00000548860 COL27A1Q8IZC6 1860 aaPredicted RBP11.01□□□□□ -0.65
CACNB3-209ENST00000548860 CUBNO60494 3623 aa11.01□□□□□ -0.65
CACNB3-209ENST00000548860 OR11H12B2RN74 326 aa11□□□□□ -0.65
CACNB3-209ENST00000548860 IGKCP01834 107 aa11□□□□□ -0.65
CACNB3-209ENST00000548860 OR11H1Q8NG94 326 aa11□□□□□ -0.65
CACNB3-209ENST00000548860 OR1N2Q8NGR9 330 aa11□□□□□ -0.65
CACNB3-209ENST00000548860 OR11H2Q8NH07 326 aa11□□□□□ -0.65
CACNB3-209ENST00000548860 PRSS2P07478 247 aa11□□□□□ -0.65
CACNB3-209ENST00000548860 HOXB4P17483 251 aaPredicted RBP11□□□□□ -0.65
CACNB3-209ENST00000548860 MYCNOSP40205 109 aa11□□□□□ -0.65
CACNB3-209ENST00000548860 CST9LQ9H4G1 147 aa11□□□□□ -0.65
CACNB3-209ENST00000548860 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms