RNA–Protein interactions for RNA: ENST00000548771.1

CCDC38-206, Transcript of coiled-coil domain containing 38, humanhuman

TSL 3

Gene CCDC38, Length 470 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-206ENST00000548771 PIK3C2GO75747 1445 aa0.27□□□□□ -2.37
CCDC38-206ENST00000548771 CD163L1Q9NR16 1453 aa0.27□□□□□ -2.37
CCDC38-206ENST00000548771 SCN7AQ01118 1682 aa0.27□□□□□ -2.37
CCDC38-206ENST00000548771 MYO7AQ13402 2215 aa0.26□□□□□ -2.37
CCDC38-206ENST00000548771 ACACAQ13085 2346 aa0.26□□□□□ -2.37
CCDC38-206ENST00000548771 C1orf196B1AJZ1 125 aa0.26□□□□□ -2.37
CCDC38-206ENST00000548771 CHP2O43745 196 aa0.26□□□□□ -2.37
CCDC38-206ENST00000548771 KLF7O75840 302 aaPredicted RBP0.26□□□□□ -2.37
CCDC38-206ENST00000548771 IFNA16P05015 189 aa0.26□□□□□ -2.37
CCDC38-206ENST00000548771 LINC00322Q6ZN03 302 aaPredicted RBP0.26□□□□□ -2.37
CCDC38-206ENST00000548771 OR8D4Q8NGM9 314 aa0.26□□□□□ -2.37
CCDC38-206ENST00000548771 ITFG2Q969R8 447 aa0.26□□□□□ -2.37
CCDC38-206ENST00000548771 C8orf76Q96K31 380 aa0.26□□□□□ -2.37
CCDC38-206ENST00000548771 HIST1H2BLQ99880 126 aa0.26□□□□□ -2.37
CCDC38-206ENST00000548771 SMR3AQ99954 134 aa0.26□□□□□ -2.37
CCDC38-206ENST00000548771 TLNRD1Q9H1K6 362 aa0.26□□□□□ -2.37
CCDC38-206ENST00000548771 C10orf95Q9H7T3 257 aa0.26□□□□□ -2.37
CCDC38-206ENST00000548771 C14orf132Q9NPU4 83 aa0.26□□□□□ -2.37
CCDC38-206ENST00000548771 NIT2Q9NQR4 276 aa0.26□□□□□ -2.37
CCDC38-206ENST00000548771 EIF3AQ14152 1382 aaKnown RBP0.26□□□□□ -2.37
CCDC38-206ENST00000548771 RTL9Q8NET4 1388 aa0.26□□□□□ -2.37
CCDC38-206ENST00000548771 LPAP08519 4548 aa0.26□□□□□ -2.37
CCDC38-206ENST00000548771 NFAT5O94916 1531 aa0.26□□□□□ -2.37
CCDC38-206ENST00000548771 DUOX1Q9NRD9 1551 aa0.26□□□□□ -2.37
CCDC38-206ENST00000548771 MUC22E2RYF6 1773 aaPredicted RBP0.26□□□□□ -2.37
CCDC38-206ENST00000548771 PPLO60437 1756 aa0.26□□□□□ -2.37
CCDC38-206ENST00000548771 ARFGEF2Q9Y6D5 1785 aa0.26□□□□□ -2.37
CCDC38-206ENST00000548771 PLXNB2O15031 1838 aa0.26□□□□□ -2.37
CCDC38-206ENST00000548771 KIF1BO60333 1816 aa0.26□□□□□ -2.37
CCDC38-206ENST00000548771 MCM3APO60318 1980 aa0.26□□□□□ -2.37
CCDC38-206ENST00000548771 SONP18583 2426 aaKnown RBP0.26□□□□□ -2.37
CCDC38-206ENST00000548771 HRNRQ86YZ3 2850 aaPredicted RBP0.25□□□□□ -2.37
CCDC38-206ENST00000548771 DMBT1Q9UGM3 2413 aaPredicted RBP0.25□□□□□ -2.37
CCDC38-206ENST00000548771 URB1O60287 2271 aaKnown RBP0.25□□□□□ -2.37
CCDC38-206ENST00000548771 TSC2P49815 1807 aa0.25□□□□□ -2.37
CCDC38-206ENST00000548771 ECM29Q5VYK3 1845 aa0.25□□□□□ -2.37
CCDC38-206ENST00000548771 ARAP2Q8WZ64 1704 aa0.25□□□□□ -2.37
CCDC38-206ENST00000548771 MUC17Q685J3 4493 aa0.25□□□□□ -2.37
CCDC38-206ENST00000548771 CPSF1Q10570 1443 aaKnown RBP0.25□□□□□ -2.37
CCDC38-206ENST00000548771 EDC4Q6P2E9 1401 aaKnown RBP0.25□□□□□ -2.37
CCDC38-206ENST00000548771 FAM236DA0A1B0GTK5 79 aa0.25□□□□□ -2.37
CCDC38-206ENST00000548771 TRBV6-4A0A1B0GX49 114 aa0.25□□□□□ -2.37
CCDC38-206ENST00000548771 TLCD2A6NGC4 264 aa0.25□□□□□ -2.37
CCDC38-206ENST00000548771 LOC730098B7Z3J9 87 aa0.25□□□□□ -2.37
CCDC38-206ENST00000548771 CCL16O15467 120 aa0.25□□□□□ -2.37
CCDC38-206ENST00000548771 TTRP02766 147 aa0.25□□□□□ -2.37
CCDC38-206ENST00000548771 FAM236CP0DP71 79 aa0.25□□□□□ -2.37
CCDC38-206ENST00000548771 TSNQ15631 228 aaKnown RBP0.25□□□□□ -2.37
CCDC38-206ENST00000548771 LCA10Q71F78 164 aa0.25□□□□□ -2.37
CCDC38-206ENST00000548771 ST6GALNAC3Q8NDV1 305 aa0.25□□□□□ -2.37
CCDC38-206ENST00000548771 OR2T35Q8NGX2 323 aa0.25□□□□□ -2.37
CCDC38-206ENST00000548771 OR2T10Q8NGZ9 312 aa0.25□□□□□ -2.37
CCDC38-206ENST00000548771 TMEM254Q8TBM7 123 aa0.25□□□□□ -2.37
CCDC38-206ENST00000548771 WFDC5Q8TCV5 224 aa0.25□□□□□ -2.37
CCDC38-206ENST00000548771 CMSS1Q9BQ75 279 aaKnown RBP0.25□□□□□ -2.37
CCDC38-206ENST00000548771 BCL2L10Q9HD36 194 aa0.25□□□□□ -2.37
CCDC38-206ENST00000548771 C14orf105Q9NVL8 296 aa0.25□□□□□ -2.37
CCDC38-206ENST00000548771 UBAP1Q9NZ09 502 aa0.25□□□□□ -2.37
CCDC38-206ENST00000548771 DNAH8Q96JB1 4490 aa0.25□□□□□ -2.37
CCDC38-206ENST00000548771 A0A1B0GUL6 1792 aa0.24□□□□□ -2.37
CCDC38-206ENST00000548771 RGPD2P0DJD1 1756 aa0.24□□□□□ -2.37
CCDC38-206ENST00000548771 ANKARQ7Z5J8 1434 aa0.24□□□□□ -2.37
CCDC38-206ENST00000548771 SPAG17Q6Q759 2223 aa0.24□□□□□ -2.37
CCDC38-206ENST00000548771 hCG_1818297A0A087WSY0 165 aa0.24□□□□□ -2.37
CCDC38-206ENST00000548771 SPAARA0A1B0GVQ0 90 aa0.24□□□□□ -2.37
CCDC38-206ENST00000548771 CLDN24A6NM45 220 aa0.24□□□□□ -2.37
CCDC38-206ENST00000548771 A8MT66 165 aa0.24□□□□□ -2.37
CCDC38-206ENST00000548771 GADD45GO95257 159 aa0.24□□□□□ -2.37
CCDC38-206ENST00000548771 CNIH1O95406 144 aa0.24□□□□□ -2.37
CCDC38-206ENST00000548771 DHFRP00374 187 aa0.24□□□□□ -2.37
CCDC38-206ENST00000548771 SMIM17P0DL12 118 aa0.24□□□□□ -2.37
CCDC38-206ENST00000548771 KRTAP20-1Q3LI63 56 aa0.24□□□□□ -2.37
CCDC38-206ENST00000548771 LELP1Q5T871 98 aa0.24□□□□□ -2.37
CCDC38-206ENST00000548771 CLDN22Q8N7P3 220 aa0.24□□□□□ -2.37
CCDC38-206ENST00000548771 CT55Q8WUE5 264 aa0.24□□□□□ -2.37
CCDC38-206ENST00000548771 SLAMF6Q96DU3 332 aa0.24□□□□□ -2.37
CCDC38-206ENST00000548771 C2orf50Q96LR7 162 aa0.24□□□□□ -2.37
CCDC38-206ENST00000548771 TAS2R7Q9NYW3 318 aa0.24□□□□□ -2.37
CCDC38-206ENST00000548771 FBXO5Q9UKT4 447 aa0.24□□□□□ -2.37
CCDC38-206ENST00000548771 MGAMO43451 1857 aa0.24□□□□□ -2.37
CCDC38-206ENST00000548771 PATJQ8NI35 1801 aa0.24□□□□□ -2.37
CCDC38-206ENST00000548771 TET1Q8NFU7 2136 aa0.23□□□□□ -2.37
CCDC38-206ENST00000548771 VPS8Q8N3P4 1428 aa0.23□□□□□ -2.37
CCDC38-206ENST00000548771 ANKRD50Q9ULJ7 1429 aa0.23□□□□□ -2.37
CCDC38-206ENST00000548771 RFX7Q2KHR2 1363 aa0.23□□□□□ -2.37
CCDC38-206ENST00000548771 PLXNA4Q9HCM2 1894 aa0.23□□□□□ -2.37
CCDC38-206ENST00000548771 PHIPQ8WWQ0 1821 aa0.23□□□□□ -2.37
CCDC38-206ENST00000548771 IGHV1-58A0A0C4DH39 117 aa0.23□□□□□ -2.37
CCDC38-206ENST00000548771 TCRBV4S1A1TA0A5B7 111 aa0.23□□□□□ -2.37
CCDC38-206ENST00000548771 SMIM23A6NLE4 172 aa0.23□□□□□ -2.37
CCDC38-206ENST00000548771 CYB5BO43169 146 aa0.23□□□□□ -2.37
CCDC38-206ENST00000548771 PRH1P02810 166 aa0.23□□□□□ -2.37
CCDC38-206ENST00000548771 SERPINA6P08185 405 aa0.23□□□□□ -2.37
CCDC38-206ENST00000548771 PPIBP23284 216 aaKnown RBP0.23□□□□□ -2.37
CCDC38-206ENST00000548771 OR6V1Q8N148 313 aa0.23□□□□□ -2.37
CCDC38-206ENST00000548771 GDPD1Q8N9F7 314 aa0.23□□□□□ -2.37
CCDC38-206ENST00000548771 FAM172AQ8WUF8 416 aa0.23□□□□□ -2.37
CCDC38-206ENST00000548771 BORCS7Q96B45 105 aa0.23□□□□□ -2.37
CCDC38-206ENST00000548771 GPER1Q99527 375 aa0.23□□□□□ -2.37
CCDC38-206ENST00000548771 ASCC3Q8N3C0 2202 aaKnown RBP0.23□□□□□ -2.37
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms