RNA–Protein interactions for RNA: ENST00000547338.5

RBFOX1-207, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 2 BASIC

Gene RBFOX1, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-207ENST00000547338 CCDC140Q96MF4 163 aa13.14□□□□□ -0.31
RBFOX1-207ENST00000547338 TRAV8-1A0A0A6YYK1 113 aa13.13□□□□□ -0.31
RBFOX1-207ENST00000547338 ZNF785A8K8V0 405 aa13.13□□□□□ -0.31
RBFOX1-207ENST00000547338 IGHV3-23P01764 117 aa13.13□□□□□ -0.31
RBFOX1-207ENST00000547338 PRB2P02812 416 aaPredicted RBP13.13□□□□□ -0.31
RBFOX1-207ENST00000547338 IGLL1P15814 213 aa13.13□□□□□ -0.31
RBFOX1-207ENST00000547338 RAB4AP20338 218 aa13.13□□□□□ -0.31
RBFOX1-207ENST00000547338 PSMB8P28062 276 aa13.13□□□□□ -0.31
RBFOX1-207ENST00000547338 GTSF1Q8WW33 167 aa13.13□□□□□ -0.31
RBFOX1-207ENST00000547338 ZC2HC1AQ96GY0 325 aa13.13□□□□□ -0.31
RBFOX1-207ENST00000547338 SAMD10Q9BYL1 202 aa13.13□□□□□ -0.31
RBFOX1-207ENST00000547338 SMAD5-AS1Q9Y6J3 95 aa13.13□□□□□ -0.31
RBFOX1-207ENST00000547338 LINC00587B1AMM8 73 aa13.13□□□□□ -0.31
RBFOX1-207ENST00000547338 NUPR1O60356 82 aa13.13□□□□□ -0.31
RBFOX1-207ENST00000547338 LINC00310P59036 64 aa13.13□□□□□ -0.31
RBFOX1-207ENST00000547338 CLEC19AQ6UXS0 136 aa13.13□□□□□ -0.31
RBFOX1-207ENST00000547338 BORCS7Q96B45 105 aa13.13□□□□□ -0.31
RBFOX1-207ENST00000547338 ALKBH7Q9BT30 221 aaPredicted RBP13.13□□□□□ -0.31
RBFOX1-207ENST00000547338 NDFIP1Q9BT67 221 aa13.13□□□□□ -0.31
RBFOX1-207ENST00000547338 KLK15Q9H2R5 256 aa13.13□□□□□ -0.31
RBFOX1-207ENST00000547338 A0A0G2JLM5 398 aa13.12□□□□□ -0.31
RBFOX1-207ENST00000547338 A0A1B0GUT8 65 aa13.12□□□□□ -0.31
RBFOX1-207ENST00000547338 IGLV1-40P01703 118 aa13.12□□□□□ -0.31
RBFOX1-207ENST00000547338 ELANEP08246 267 aa13.12□□□□□ -0.31
RBFOX1-207ENST00000547338 SLAQ13239 276 aa13.12□□□□□ -0.31
RBFOX1-207ENST00000547338 TCF24Q7RTU0 167 aa13.12□□□□□ -0.31
RBFOX1-207ENST00000547338 KLHL30-AS1Q8NEE0 82 aa13.12□□□□□ -0.31
RBFOX1-207ENST00000547338 RAX2Q96IS3 184 aa13.12□□□□□ -0.31
RBFOX1-207ENST00000547338 DUX3Q96PT4 197 aa13.12□□□□□ -0.31
RBFOX1-207ENST00000547338 NAGKQ9UJ70 344 aa13.12□□□□□ -0.31
RBFOX1-207ENST00000547338 CHEK1O14757 476 aa13.11□□□□□ -0.31
RBFOX1-207ENST00000547338 SCGB1D1O95968 90 aa13.11□□□□□ -0.31
RBFOX1-207ENST00000547338 PF4P02776 101 aa13.11□□□□□ -0.31
RBFOX1-207ENST00000547338 DEFB136Q30KP8 78 aa13.11□□□□□ -0.31
RBFOX1-207ENST00000547338 C18orf32Q8TCD1 76 aa13.11□□□□□ -0.31
RBFOX1-207ENST00000547338 PGLYRP4Q96LB8 373 aa13.11□□□□□ -0.31
RBFOX1-207ENST00000547338 PRR25Q96S07 402 aa13.11□□□□□ -0.31
RBFOX1-207ENST00000547338 PPP1R14DQ9NXH3 145 aa13.11□□□□□ -0.31
RBFOX1-207ENST00000547338 A0A1W2PS18 150 aa13.1□□□□□ -0.31
RBFOX1-207ENST00000547338 M0R3E3 92 aa13.1□□□□□ -0.31
RBFOX1-207ENST00000547338 NDUFA4O00483 81 aa13.1□□□□□ -0.31
RBFOX1-207ENST00000547338 ZNF324O75467 553 aaPredicted RBP13.1□□□□□ -0.31
RBFOX1-207ENST00000547338 TRGV3P03979 118 aa13.1□□□□□ -0.31
RBFOX1-207ENST00000547338 CD33P20138 364 aa13.1□□□□□ -0.31
RBFOX1-207ENST00000547338 CAMPP49913 170 aa13.1□□□□□ -0.31
RBFOX1-207ENST00000547338 KIAA1644Q3SXP7 199 aa13.1□□□□□ -0.31
RBFOX1-207ENST00000547338 GDF5OSQ5U4N7 250 aa13.1□□□□□ -0.31
RBFOX1-207ENST00000547338 LCN12Q6JVE5 192 aa13.1□□□□□ -0.31
RBFOX1-207ENST00000547338 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.08□□□□□ -0.31
RBFOX1-207ENST00000547338 TMEM189A5PLL7 270 aa13.08□□□□□ -0.31
RBFOX1-207ENST00000547338 APOHP02749 345 aaPredicted RBP13.08□□□□□ -0.31
RBFOX1-207ENST00000547338 PMCHP20382 165 aa13.08□□□□□ -0.31
RBFOX1-207ENST00000547338 CHCHD1Q96BP2 118 aaKnown RBP13.08□□□□□ -0.31
RBFOX1-207ENST00000547338 ARL3P36405 182 aa13.08□□□□□ -0.32
RBFOX1-207ENST00000547338 CRIP1P50238 77 aa13.08□□□□□ -0.32
RBFOX1-207ENST00000547338 CDPF1Q6NVV7 123 aa13.08□□□□□ -0.32
RBFOX1-207ENST00000547338 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.08□□□□□ -0.32
RBFOX1-207ENST00000547338 ZNF493Q6ZR52 646 aa13.08□□□□□ -0.32
RBFOX1-207ENST00000547338 CCL24O00175 119 aa13.07□□□□□ -0.32
RBFOX1-207ENST00000547338 DDTP30046 118 aa13.07□□□□□ -0.32
RBFOX1-207ENST00000547338 AMTP48728 403 aa13.07□□□□□ -0.32
RBFOX1-207ENST00000547338 FHL3Q13643 280 aa13.07□□□□□ -0.32
RBFOX1-207ENST00000547338 Q6ZWC4 215 aa13.07□□□□□ -0.32
RBFOX1-207ENST00000547338 C4orf3Q8WVX3 66 aa13.07□□□□□ -0.32
RBFOX1-207ENST00000547338 LENEPQ9Y5L5 61 aa13.07□□□□□ -0.32
RBFOX1-207ENST00000547338 LOC102724200A0A096LPH7 203 aaPredicted RBP13.06□□□□□ -0.32
RBFOX1-207ENST00000547338 FABP5P3A8MUU1 101 aa13.06□□□□□ -0.32
RBFOX1-207ENST00000547338 KRTAP10-11P60412 298 aa13.06□□□□□ -0.32
RBFOX1-207ENST00000547338 ZNF664Q8N3J9 261 aa13.06□□□□□ -0.32
RBFOX1-207ENST00000547338 ASCL2Q99929 193 aa13.06□□□□□ -0.32
RBFOX1-207ENST00000547338 NRN1Q9NPD7 142 aa13.06□□□□□ -0.32
RBFOX1-207ENST00000547338 HSBP1O75506 76 aa13.05□□□□□ -0.32
RBFOX1-207ENST00000547338 UBE2E2Q96LR5 201 aa13.05□□□□□ -0.32
RBFOX1-207ENST00000547338 ZNF705FA8MVS1 300 aaPredicted RBP13.04□□□□□ -0.32
RBFOX1-207ENST00000547338 F2Z2F3 143 aa13.04□□□□□ -0.32
RBFOX1-207ENST00000547338 SH2D1AO60880 128 aa13.04□□□□□ -0.32
RBFOX1-207ENST00000547338 OR5AL1P0C617 328 aa13.04□□□□□ -0.32
RBFOX1-207ENST00000547338 ZNF705DP0CH99 300 aaPredicted RBP13.04□□□□□ -0.32
RBFOX1-207ENST00000547338 ZNF705BP0CI00 300 aaPredicted RBP13.04□□□□□ -0.32
RBFOX1-207ENST00000547338 LBHQ53QV2 105 aaPredicted RBP13.04□□□□□ -0.32
RBFOX1-207ENST00000547338 SAMD13Q5VXD3 122 aa13.04□□□□□ -0.32
RBFOX1-207ENST00000547338 TEX43Q6ZNM6 134 aa13.04□□□□□ -0.32
RBFOX1-207ENST00000547338 REC114Q7Z4M0 266 aa13.04□□□□□ -0.32
RBFOX1-207ENST00000547338 C8orf49Q96NF6 230 aa13.04□□□□□ -0.32
RBFOX1-207ENST00000547338 IGKV2-40A0A087WW87 121 aaPredicted RBP13.03□□□□□ -0.32
RBFOX1-207ENST00000547338 IGKV2D-40P01614 121 aaPredicted RBP13.03□□□□□ -0.32
RBFOX1-207ENST00000547338 HIST1H1AQ02539 215 aaPredicted RBP13.03□□□□□ -0.32
RBFOX1-207ENST00000547338 EGFEM1PQ0D2K5 195 aa13.03□□□□□ -0.32
RBFOX1-207ENST00000547338 GLMPQ8WWB7 406 aa13.03□□□□□ -0.32
RBFOX1-207ENST00000547338 K7EMT4 169 aa13.03□□□□□ -0.32
RBFOX1-207ENST00000547338 HOXD3P31249 432 aaPredicted RBP13.03□□□□□ -0.32
RBFOX1-207ENST00000547338 C9orf47Q6ZRZ4 202 aa13.03□□□□□ -0.32
RBFOX1-207ENST00000547338 NIT1Q86X76 327 aa13.03□□□□□ -0.32
RBFOX1-207ENST00000547338 RCHY1Q96PM5 261 aa13.03□□□□□ -0.32
RBFOX1-207ENST00000547338 SSBP4Q9BWG4 385 aaPredicted RBP13.03□□□□□ -0.32
RBFOX1-207ENST00000547338 VGLL1Q99990 258 aa13.02□□□□□ -0.33
RBFOX1-207ENST00000547338 IGHV3-35A0A0C4DH35 117 aa13.01□□□□□ -0.33
RBFOX1-207ENST00000547338 KIR2DL5BA0A0G2JN68 375 aa13.01□□□□□ -0.33
RBFOX1-207ENST00000547338 KIR2DL5BA0A0G2JPC4 375 aa13.01□□□□□ -0.33
RBFOX1-207ENST00000547338 CTRLP40313 264 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms