RNA–Protein interactions for RNA: ENST00000547247.5

SMARCD1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 1 (best)

Gene SMARCD1, Length 1,584 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-203ENST00000547247 NEU1Q99519 415 aa16.78■□□□□ 0.28
SMARCD1-203ENST00000547247 NIPSNAP3BQ9BS92 247 aa16.78■□□□□ 0.28
SMARCD1-203ENST00000547247 RBFOX3A6NFN3 312 aa16.77■□□□□ 0.28
SMARCD1-203ENST00000547247 SAPCD1Q5SSQ6 148 aa16.77■□□□□ 0.28
SMARCD1-203ENST00000547247 PRR9Q5T870 116 aa16.77■□□□□ 0.28
SMARCD1-203ENST00000547247 LINC01587Q99440 93 aa16.77■□□□□ 0.28
SMARCD1-203ENST00000547247 SMIM9A6NGZ8 99 aa16.77■□□□□ 0.27
SMARCD1-203ENST00000547247 H7BYZ3 331 aa16.77■□□□□ 0.27
SMARCD1-203ENST00000547247 MIFP14174 115 aa16.77■□□□□ 0.27
SMARCD1-203ENST00000547247 TMEM183BQ1AE95 376 aa16.77■□□□□ 0.27
SMARCD1-203ENST00000547247 ZNF767PQ75MW2 155 aa16.77■□□□□ 0.27
SMARCD1-203ENST00000547247 C11orf52Q96A22 123 aa16.77■□□□□ 0.27
SMARCD1-203ENST00000547247 S100A9P06702 114 aaKnown RBP16.76■□□□□ 0.27
SMARCD1-203ENST00000547247 RAB14P61106 215 aa16.76■□□□□ 0.27
SMARCD1-203ENST00000547247 IFITM2Q01629 132 aa16.76■□□□□ 0.27
SMARCD1-203ENST00000547247 Q86TA4 180 aa16.76■□□□□ 0.27
SMARCD1-203ENST00000547247 TRBV6-1A0A0K0K1D8 114 aa16.75■□□□□ 0.27
SMARCD1-203ENST00000547247 ZNF324O75467 553 aaPredicted RBP16.75■□□□□ 0.27
SMARCD1-203ENST00000547247 ZNF506Q5JVG8 444 aa16.75■□□□□ 0.27
SMARCD1-203ENST00000547247 FAM210AQ96ND0 272 aa16.75■□□□□ 0.27
SMARCD1-203ENST00000547247 ZFP30Q9Y2G7 519 aa16.75■□□□□ 0.27
SMARCD1-203ENST00000547247 RRN3P1Q2M238 152 aa16.74■□□□□ 0.27
SMARCD1-203ENST00000547247 TOR2AQ5JU69 321 aa16.74■□□□□ 0.27
SMARCD1-203ENST00000547247 Q8NAQ8 132 aa16.74■□□□□ 0.27
SMARCD1-203ENST00000547247 C8orf49Q96NF6 230 aa16.74■□□□□ 0.27
SMARCD1-203ENST00000547247 EIF5A2Q9GZV4 153 aaKnown RBP16.74■□□□□ 0.27
SMARCD1-203ENST00000547247 IGHV4-28A0A0C4DH34 117 aa16.73■□□□□ 0.27
SMARCD1-203ENST00000547247 TAS2R60P59551 318 aa16.73■□□□□ 0.27
SMARCD1-203ENST00000547247 Q6AWC8 147 aa16.73■□□□□ 0.27
SMARCD1-203ENST00000547247 HTN1P15515 57 aa16.72■□□□□ 0.27
SMARCD1-203ENST00000547247 SMUG1Q53HV7 270 aa16.72■□□□□ 0.27
SMARCD1-203ENST00000547247 PYGO2Q9BRQ0 406 aa16.72■□□□□ 0.27
SMARCD1-203ENST00000547247 MED9Q9NWA0 146 aa16.72■□□□□ 0.27
SMARCD1-203ENST00000547247 ZNF705GA8MUZ8 300 aaPredicted RBP16.72■□□□□ 0.27
SMARCD1-203ENST00000547247 LTAP01374 205 aa16.72■□□□□ 0.27
SMARCD1-203ENST00000547247 STAB2Q8WWQ8 2551 aa16.71■□□□□ 0.27
SMARCD1-203ENST00000547247 A0A0J9YWU9 116 aa16.71■□□□□ 0.27
SMARCD1-203ENST00000547247 RPL35P42766 123 aaKnown RBP16.71■□□□□ 0.27
SMARCD1-203ENST00000547247 DERL1Q9BUN8 251 aa16.71■□□□□ 0.27
SMARCD1-203ENST00000547247 C11orf68Q9H3H3 251 aaKnown RBP16.71■□□□□ 0.27
SMARCD1-203ENST00000547247 TRAV21A0A0B4J279 112 aa16.7■□□□□ 0.26
SMARCD1-203ENST00000547247 DEFB4AO15263 64 aa16.7■□□□□ 0.26
SMARCD1-203ENST00000547247 GCGP01275 180 aa16.7■□□□□ 0.26
SMARCD1-203ENST00000547247 PRM2P04554 102 aa16.7■□□□□ 0.26
SMARCD1-203ENST00000547247 Q6ZQT7 251 aa16.7■□□□□ 0.26
SMARCD1-203ENST00000547247 TMEM250H0YL14 139 aa16.69■□□□□ 0.26
SMARCD1-203ENST00000547247 BAGE2Q86Y30 109 aa16.69■□□□□ 0.26
SMARCD1-203ENST00000547247 EDA2RQ9HAV5 297 aa16.69■□□□□ 0.26
SMARCD1-203ENST00000547247 RGS13O14921 159 aa16.68■□□□□ 0.26
SMARCD1-203ENST00000547247 NDUFS6O75380 124 aaKnown RBP16.68■□□□□ 0.26
SMARCD1-203ENST00000547247 ZNF80P51504 273 aaPredicted RBP16.68■□□□□ 0.26
SMARCD1-203ENST00000547247 CLLU1Q5K131 121 aa16.68■□□□□ 0.26
SMARCD1-203ENST00000547247 LINC00467Q9BRT7 94 aa16.68■□□□□ 0.26
SMARCD1-203ENST00000547247 TMEM189A5PLL7 270 aa16.68■□□□□ 0.26
SMARCD1-203ENST00000547247 AZU1P20160 251 aa16.68■□□□□ 0.26
SMARCD1-203ENST00000547247 COX8CQ7Z4L0 72 aa16.68■□□□□ 0.26
SMARCD1-203ENST00000547247 TMEM183AQ8IXX5 376 aa16.68■□□□□ 0.26
SMARCD1-203ENST00000547247 IGHV1OR15-1A0A075B7D0 117 aa16.67■□□□□ 0.26
SMARCD1-203ENST00000547247 PFN1P07737 140 aaKnown RBP16.67■□□□□ 0.26
SMARCD1-203ENST00000547247 EIF4E3Q8N5X7 224 aaKnown RBP16.67■□□□□ 0.26
SMARCD1-203ENST00000547247 MUC21Q5SSG8 566 aa16.66■□□□□ 0.26
SMARCD1-203ENST00000547247 FAM159AQ6UWV7 190 aa16.66■□□□□ 0.26
SMARCD1-203ENST00000547247 ZNF493Q6ZR52 646 aa16.66■□□□□ 0.26
SMARCD1-203ENST00000547247 TMEM263Q8WUH6 116 aaKnown RBP16.66■□□□□ 0.26
SMARCD1-203ENST00000547247 C16orf74Q96GX8 76 aa16.66■□□□□ 0.26
SMARCD1-203ENST00000547247 ZC2HC1AQ96GY0 325 aa16.66■□□□□ 0.26
SMARCD1-203ENST00000547247 RAB19A4D1S5 217 aa16.65■□□□□ 0.26
SMARCD1-203ENST00000547247 EMP1P54849 157 aa16.65■□□□□ 0.26
SMARCD1-203ENST00000547247 NHLRC2Q8NBF2 726 aa16.65■□□□□ 0.26
SMARCD1-203ENST00000547247 WWC2-AS2Q96NR7 200 aa16.65■□□□□ 0.26
SMARCD1-203ENST00000547247 MLST8Q9BVC4 326 aa16.65■□□□□ 0.26
SMARCD1-203ENST00000547247 CBY3A6NI87 242 aa16.64■□□□□ 0.25
SMARCD1-203ENST00000547247 FABP5P3A8MUU1 101 aa16.64■□□□□ 0.25
SMARCD1-203ENST00000547247 ANXA2RQ3ZCQ2 193 aa16.64■□□□□ 0.25
SMARCD1-203ENST00000547247 CENPWQ5EE01 88 aa16.64■□□□□ 0.25
SMARCD1-203ENST00000547247 RNASE8Q8TDE3 154 aaKnown RBP16.64■□□□□ 0.25
SMARCD1-203ENST00000547247 NAGKQ9UJ70 344 aa16.64■□□□□ 0.25
SMARCD1-203ENST00000547247 GNG4P50150 75 aa16.64■□□□□ 0.25
SMARCD1-203ENST00000547247 PEA15Q15121 130 aa16.64■□□□□ 0.25
SMARCD1-203ENST00000547247 SRP19P09132 144 aaKnown RBP16.63■□□□□ 0.25
SMARCD1-203ENST00000547247 CEBPGP53567 150 aa16.63■□□□□ 0.25
SMARCD1-203ENST00000547247 TDRG1Q3Y452 100 aa16.63■□□□□ 0.25
SMARCD1-203ENST00000547247 PARLQ9H300 379 aa16.63■□□□□ 0.25
SMARCD1-203ENST00000547247 SMDT1Q9H4I9 107 aa16.63■□□□□ 0.25
SMARCD1-203ENST00000547247 CRIP1P50238 77 aa16.62■□□□□ 0.25
SMARCD1-203ENST00000547247 FAM162BQ5T6X4 162 aa16.62■□□□□ 0.25
SMARCD1-203ENST00000547247 SMIM12Q96EX1 92 aa16.62■□□□□ 0.25
SMARCD1-203ENST00000547247 KCNS1Q96KK3 526 aa16.62■□□□□ 0.25
SMARCD1-203ENST00000547247 ZNF674Q2M3X9 581 aa16.61■□□□□ 0.25
SMARCD1-203ENST00000547247 C11orf21Q9P2W6 132 aa16.61■□□□□ 0.25
SMARCD1-203ENST00000547247 TP53TG3Q9ULZ0 132 aa16.61■□□□□ 0.25
SMARCD1-203ENST00000547247 TRBV20OR9-2A0A075B6H5 130 aa16.6■□□□□ 0.25
SMARCD1-203ENST00000547247 PLAC8L1A1L4L8 177 aa16.6■□□□□ 0.25
SMARCD1-203ENST00000547247 SRSF3P84103 164 aaKnown RBP16.6■□□□□ 0.25
SMARCD1-203ENST00000547247 SNURFLB1AK76 121 aa16.6■□□□□ 0.25
SMARCD1-203ENST00000547247 C9JCJ5 164 aa16.6■□□□□ 0.25
SMARCD1-203ENST00000547247 SH2D1AO60880 128 aa16.6■□□□□ 0.25
SMARCD1-203ENST00000547247 IGLV2-8P01709 118 aa16.6■□□□□ 0.25
SMARCD1-203ENST00000547247 IL17DQ8TAD2 202 aa16.6■□□□□ 0.25
SMARCD1-203ENST00000547247 C11orf45Q8TAV5 145 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 101.1 ms