RNA–Protein interactions for RNA: ENST00000547230.5

CACNB3-204, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3 BASIC

Gene CACNB3, Length 2,395 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-204ENST00000547230 MRPL35Q9NZE8 188 aaKnown RBP9.77□□□□□ -0.85
CACNB3-204ENST00000547230 IGHV7-81A0A0B4J1V7 117 aa9.77□□□□□ -0.85
CACNB3-204ENST00000547230 TRAV26-2A0A0B4J265 109 aa9.77□□□□□ -0.85
CACNB3-204ENST00000547230 IGHV3-66A0A0C4DH42 116 aa9.77□□□□□ -0.85
CACNB3-204ENST00000547230 M0R1W7 72 aa9.77□□□□□ -0.85
CACNB3-204ENST00000547230 SCGB2A1O75556 95 aa9.77□□□□□ -0.85
CACNB3-204ENST00000547230 RPL24P83731 157 aaKnown RBP9.77□□□□□ -0.85
CACNB3-204ENST00000547230 MAPKAPK5-AS1Q8N8E1 139 aa9.77□□□□□ -0.85
CACNB3-204ENST00000547230 TM2D2Q9BX73 214 aa9.77□□□□□ -0.85
CACNB3-204ENST00000547230 ZFAND3Q9H8U3 227 aa9.77□□□□□ -0.85
CACNB3-204ENST00000547230 SMPXQ9UHP9 88 aa9.77□□□□□ -0.85
CACNB3-204ENST00000547230 ANKHD1Q8IWZ3 2542 aaKnown RBP9.76□□□□□ -0.85
CACNB3-204ENST00000547230 VMO1Q7Z5L0 202 aa9.76□□□□□ -0.85
CACNB3-204ENST00000547230 NRACQ8N912 160 aa9.76□□□□□ -0.85
CACNB3-204ENST00000547230 BUB3O43684 328 aa9.75□□□□□ -0.85
CACNB3-204ENST00000547230 HLA-DRB4P13762 266 aa9.75□□□□□ -0.85
CACNB3-204ENST00000547230 AGPAT4-IT1Q9H0P7 198 aa9.75□□□□□ -0.85
CACNB3-204ENST00000547230 HLA-DRB4X5D2U9 266 aa9.75□□□□□ -0.85
CACNB3-204ENST00000547230 AGRNO00468 2067 aa9.75□□□□□ -0.85
CACNB3-204ENST00000547230 IGHV3OR16-13A0A075B7E8 117 aa9.75□□□□□ -0.85
CACNB3-204ENST00000547230 IGHV3-74A0A0B4J1X5 117 aa9.75□□□□□ -0.85
CACNB3-204ENST00000547230 IGHV7-4-1A0A0J9YVY3 117 aa9.75□□□□□ -0.85
CACNB3-204ENST00000547230 RBAKDNA6NC62 111 aa9.75□□□□□ -0.85
CACNB3-204ENST00000547230 FAM90A27PA6NNH2 459 aa9.75□□□□□ -0.85
CACNB3-204ENST00000547230 Q6ZQT7 251 aa9.75□□□□□ -0.85
CACNB3-204ENST00000547230 ZNF502Q8TBZ5 544 aa9.75□□□□□ -0.85
CACNB3-204ENST00000547230 C15orf32Q32M92 178 aa9.74□□□□□ -0.85
CACNB3-204ENST00000547230 UFC1Q9Y3C8 167 aa9.74□□□□□ -0.85
CACNB3-204ENST00000547230 CLPSL1A2RUU4 121 aa9.74□□□□□ -0.85
CACNB3-204ENST00000547230 E9PLD3 99 aa9.74□□□□□ -0.85
CACNB3-204ENST00000547230 EFNA4P52798 201 aa9.74□□□□□ -0.85
CACNB3-204ENST00000547230 LAGE3Q14657 143 aa9.74□□□□□ -0.85
CACNB3-204ENST00000547230 CCDC144NLQ6NUI1 221 aa9.74□□□□□ -0.85
CACNB3-204ENST00000547230 TRAV8-2A0A0B4J237 113 aa9.73□□□□□ -0.85
CACNB3-204ENST00000547230 IGLL5B9A064 214 aa9.73□□□□□ -0.85
CACNB3-204ENST00000547230 EBI3Q14213 229 aa9.73□□□□□ -0.85
CACNB3-204ENST00000547230 ECSCRQ19T08 205 aa9.73□□□□□ -0.85
CACNB3-204ENST00000547230 Q8N9W7 124 aa9.73□□□□□ -0.85
CACNB3-204ENST00000547230 MYOZ3Q8TDC0 251 aa9.73□□□□□ -0.85
CACNB3-204ENST00000547230 SLC50A1Q9BRV3 221 aa9.73□□□□□ -0.85
CACNB3-204ENST00000547230 HRNRQ86YZ3 2850 aaPredicted RBP9.73□□□□□ -0.85
CACNB3-204ENST00000547230 A0A087WX48 190 aa9.73□□□□□ -0.85
CACNB3-204ENST00000547230 CLEC3BP05452 202 aa9.73□□□□□ -0.85
CACNB3-204ENST00000547230 SRSF1Q07955 248 aaKnown RBP eCLIP9.73□□□□□ -0.85
CACNB3-204ENST00000547230 TIMD4Q96H15 378 aa9.73□□□□□ -0.85
CACNB3-204ENST00000547230 VKORC1Q9BQB6 163 aa9.73□□□□□ -0.85
CACNB3-204ENST00000547230 RIF1Q5UIP0 2472 aaKnown RBP9.72□□□□□ -0.85
CACNB3-204ENST00000547230 IGHV3-49A0A0A0MS15 119 aa9.72□□□□□ -0.85
CACNB3-204ENST00000547230 FAM110DQ8TAY7 271 aaPredicted RBP9.72□□□□□ -0.85
CACNB3-204ENST00000547230 MSRB2Q9Y3D2 182 aa9.72□□□□□ -0.85
CACNB3-204ENST00000547230 SVEP1Q4LDE5 3571 aa9.72□□□□□ -0.85
CACNB3-204ENST00000547230 NBL1P41271 181 aa9.72□□□□□ -0.85
CACNB3-204ENST00000547230 CCDC140Q96MF4 163 aa9.72□□□□□ -0.85
CACNB3-204ENST00000547230 TLN1Q9Y490 2541 aaKnown RBP9.71□□□□□ -0.85
CACNB3-204ENST00000547230 ZNF207O43670 478 aaKnown RBP9.71□□□□□ -0.85
CACNB3-204ENST00000547230 WFDC2Q14508 124 aa9.71□□□□□ -0.85
CACNB3-204ENST00000547230 C12orf74Q32Q52 190 aa9.71□□□□□ -0.85
CACNB3-204ENST00000547230 TMEM78Q5T7P6 136 aa9.71□□□□□ -0.85
CACNB3-204ENST00000547230 ZNF479Q96JC4 524 aa9.71□□□□□ -0.85
CACNB3-204ENST00000547230 CACNA1BQ00975 2339 aa9.71□□□□□ -0.86
CACNB3-204ENST00000547230 RELNP78509 3460 aa9.71□□□□□ -0.86
CACNB3-204ENST00000547230 ATP6V0E1O15342 81 aa9.71□□□□□ -0.86
CACNB3-204ENST00000547230 RAB9AP51151 201 aa9.71□□□□□ -0.86
CACNB3-204ENST00000547230 TAL2Q16559 108 aa9.71□□□□□ -0.86
CACNB3-204ENST00000547230 CLEC19AQ6UXS0 136 aa9.71□□□□□ -0.86
CACNB3-204ENST00000547230 FOXI2Q6ZQN5 318 aa9.71□□□□□ -0.86
CACNB3-204ENST00000547230 SPANXB1Q9NS25 103 aaPredicted RBP9.71□□□□□ -0.86
CACNB3-204ENST00000547230 PIEZO1Q92508 2521 aa9.7□□□□□ -0.86
CACNB3-204ENST00000547230 OOSP1A8MZH6 123 aa9.7□□□□□ -0.86
CACNB3-204ENST00000547230 GOSR1O95249 250 aa9.7□□□□□ -0.86
CACNB3-204ENST00000547230 SPANXN1Q5VSR9 72 aa9.7□□□□□ -0.86
CACNB3-204ENST00000547230 C8orf86Q6ZUL3 223 aa9.7□□□□□ -0.86
CACNB3-204ENST00000547230 SPTBN2O15020 2390 aa9.7□□□□□ -0.86
CACNB3-204ENST00000547230 H3BVH4 76 aa9.7□□□□□ -0.86
CACNB3-204ENST00000547230 PLNP26678 52 aa9.7□□□□□ -0.86
CACNB3-204ENST00000547230 PRR9Q5T870 116 aa9.7□□□□□ -0.86
CACNB3-204ENST00000547230 MINOS1Q5TGZ0 78 aa9.7□□□□□ -0.86
CACNB3-204ENST00000547230 SAMD13Q5VXD3 122 aa9.7□□□□□ -0.86
CACNB3-204ENST00000547230 CLUHP3Q96NS8 147 aa9.7□□□□□ -0.86
CACNB3-204ENST00000547230 HIST1H4GQ99525 98 aa9.7□□□□□ -0.86
CACNB3-204ENST00000547230 MINOS1-NBL1R4GNA1 71 aa9.7□□□□□ -0.86
CACNB3-204ENST00000547230 TRBV7-3A0A075B6L6 115 aa9.69□□□□□ -0.86
CACNB3-204ENST00000547230 IGHV4-4A0A075B6R2 117 aa9.69□□□□□ -0.86
CACNB3-204ENST00000547230 H3BMG7 143 aa9.69□□□□□ -0.86
CACNB3-204ENST00000547230 ZFP36P26651 326 aaKnown RBP9.69□□□□□ -0.86
CACNB3-204ENST00000547230 SMIM2Q9BVW6 85 aa9.69□□□□□ -0.86
CACNB3-204ENST00000547230 G3V318 75 aa9.68□□□□□ -0.86
CACNB3-204ENST00000547230 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.68□□□□□ -0.86
CACNB3-204ENST00000547230 AMTNQ6UX39 209 aa9.68□□□□□ -0.86
CACNB3-204ENST00000547230 C9orf47Q6ZRZ4 202 aa9.68□□□□□ -0.86
CACNB3-204ENST00000547230 GTSF1LQ9H1H1 148 aa9.68□□□□□ -0.86
CACNB3-204ENST00000547230 MED13LQ71F56 2210 aa9.68□□□□□ -0.86
CACNB3-204ENST00000547230 LINC01548A6NM66 108 aa9.68□□□□□ -0.86
CACNB3-204ENST00000547230 F8VRH5 84 aa9.68□□□□□ -0.86
CACNB3-204ENST00000547230 F8W1H4 67 aa9.68□□□□□ -0.86
CACNB3-204ENST00000547230 CDSNQ15517 529 aa9.68□□□□□ -0.86
CACNB3-204ENST00000547230 KLK15Q9H2R5 256 aa9.68□□□□□ -0.86
CACNB3-204ENST00000547230 TSSC4Q9Y5U2 329 aaPredicted RBP9.68□□□□□ -0.86
CACNB3-204ENST00000547230 ZFHX2Q9C0A1 2572 aaPredicted RBP9.68□□□□□ -0.86
CACNB3-204ENST00000547230 TRAV12-1A0A0B4J245 112 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms