RNA–Protein interactions for RNA: ENST00000547179.1

LINC00485-201, long intergenic non-protein coding RNA 485, humanhuman

TSL 1 (best) BASIC

Gene LINC00485, Length 3,722 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00485-201ENST00000547179 FAM3BP58499 235 aaPredicted RBP8.35□□□□□ -1.07
LINC00485-201ENST00000547179 WNK1Q9H4A3 2382 aa8.35□□□□□ -1.07
LINC00485-201ENST00000547179 CSMD2Q7Z408 3487 aa8.35□□□□□ -1.07
LINC00485-201ENST00000547179 C19orf71A6NCJ1 209 aa8.34□□□□□ -1.07
LINC00485-201ENST00000547179 IZUMO1RA6ND01 250 aa8.34□□□□□ -1.07
LINC00485-201ENST00000547179 TCL1AP56279 114 aa8.34□□□□□ -1.07
LINC00485-201ENST00000547179 GTSCR1Q86UQ5 136 aa8.34□□□□□ -1.07
LINC00485-201ENST00000547179 F6UB75 175 aa8.34□□□□□ -1.07
LINC00485-201ENST00000547179 ZNF705DP0CH99 300 aaPredicted RBP8.34□□□□□ -1.07
LINC00485-201ENST00000547179 ZNF705BP0CI00 300 aaPredicted RBP8.34□□□□□ -1.07
LINC00485-201ENST00000547179 PRB4P10163 310 aaPredicted RBP8.34□□□□□ -1.07
LINC00485-201ENST00000547179 RIGQ13278 110 aa8.34□□□□□ -1.07
LINC00485-201ENST00000547179 ACTL10Q5JWF8 245 aa8.34□□□□□ -1.07
LINC00485-201ENST00000547179 KCNS1Q96KK3 526 aa8.34□□□□□ -1.07
LINC00485-201ENST00000547179 J3KRW8 73 aa8.34□□□□□ -1.07
LINC00485-201ENST00000547179 RNASE4P34096 147 aaKnown RBP8.34□□□□□ -1.07
LINC00485-201ENST00000547179 RAB4BP61018 213 aa8.34□□□□□ -1.07
LINC00485-201ENST00000547179 MAP6D1Q9H9H5 199 aa8.34□□□□□ -1.07
LINC00485-201ENST00000547179 COLCA2A8K830 154 aa8.33□□□□□ -1.08
LINC00485-201ENST00000547179 IGKV3-20P01619 116 aa8.33□□□□□ -1.08
LINC00485-201ENST00000547179 S100A4P26447 101 aaKnown RBP8.33□□□□□ -1.08
LINC00485-201ENST00000547179 TPPP3Q9BW30 176 aa8.33□□□□□ -1.08
LINC00485-201ENST00000547179 TGIF2-C20orf24A0A0A6YYL0 155 aa8.33□□□□□ -1.08
LINC00485-201ENST00000547179 SMIM27A0A1W2PRY6 76 aa8.33□□□□□ -1.08
LINC00485-201ENST00000547179 MT-ND6P03923 174 aa8.33□□□□□ -1.08
LINC00485-201ENST00000547179 HLA-DRB4P13762 266 aa8.33□□□□□ -1.08
LINC00485-201ENST00000547179 CRISP2P16562 243 aa8.33□□□□□ -1.08
LINC00485-201ENST00000547179 CDKN1BP46527 198 aa8.33□□□□□ -1.08
LINC00485-201ENST00000547179 FAM159AQ6UWV7 190 aa8.33□□□□□ -1.08
LINC00485-201ENST00000547179 NAGKQ9UJ70 344 aa8.33□□□□□ -1.08
LINC00485-201ENST00000547179 HLA-DRB4X5D2U9 266 aa8.33□□□□□ -1.08
LINC00485-201ENST00000547179 TMSB15BA0A087X1C1 80 aa8.32□□□□□ -1.08
LINC00485-201ENST00000547179 A0A1B0GW15 77 aa8.32□□□□□ -1.08
LINC00485-201ENST00000547179 SMIM15Q7Z3B0 74 aa8.32□□□□□ -1.08
LINC00485-201ENST00000547179 FAM110AQ9BQ89 295 aa8.32□□□□□ -1.08
LINC00485-201ENST00000547179 SRD5A3Q9H8P0 318 aa8.32□□□□□ -1.08
LINC00485-201ENST00000547179 TMA7Q9Y2S6 64 aaKnown RBP8.32□□□□□ -1.08
LINC00485-201ENST00000547179 ATP5L2Q7Z4Y8 100 aa8.32□□□□□ -1.08
LINC00485-201ENST00000547179 FRZBQ92765 325 aa8.32□□□□□ -1.08
LINC00485-201ENST00000547179 NEU1Q99519 415 aa8.32□□□□□ -1.08
LINC00485-201ENST00000547179 C7orf71A4D174 169 aa8.32□□□□□ -1.08
LINC00485-201ENST00000547179 HIGD1CA8MV81 97 aa8.32□□□□□ -1.08
LINC00485-201ENST00000547179 RASL11AQ6T310 242 aa8.32□□□□□ -1.08
LINC00485-201ENST00000547179 KNCNA6PVL3 124 aa8.31□□□□□ -1.08
LINC00485-201ENST00000547179 S100A6P06703 90 aa8.31□□□□□ -1.08
LINC00485-201ENST00000547179 PYGO2Q9BRQ0 406 aa8.31□□□□□ -1.08
LINC00485-201ENST00000547179 F2Z2F3 143 aa8.31□□□□□ -1.08
LINC00485-201ENST00000547179 LINC01559Q495D7 138 aa8.31□□□□□ -1.08
LINC00485-201ENST00000547179 FER1L6-AS1Q8NA97 138 aa8.31□□□□□ -1.08
LINC00485-201ENST00000547179 PGLYRP4Q96LB8 373 aa8.31□□□□□ -1.08
LINC00485-201ENST00000547179 TRAPPC1Q9Y5R8 145 aa8.31□□□□□ -1.08
LINC00485-201ENST00000547179 A0A1B0GUT8 65 aa8.3□□□□□ -1.08
LINC00485-201ENST00000547179 CA1P00915 261 aaPredicted RBP8.3□□□□□ -1.08
LINC00485-201ENST00000547179 CXCL1P09341 107 aa8.3□□□□□ -1.08
LINC00485-201ENST00000547179 ASIPP42127 132 aa8.3□□□□□ -1.08
LINC00485-201ENST00000547179 MRPL54Q6P161 138 aaKnown RBP8.3□□□□□ -1.08
LINC00485-201ENST00000547179 H3BMM0 161 aa8.3□□□□□ -1.08
LINC00485-201ENST00000547179 HLA-DQA1P01909 254 aa8.3□□□□□ -1.08
LINC00485-201ENST00000547179 TYMSP04818 313 aa8.3□□□□□ -1.08
LINC00485-201ENST00000547179 C1QTNF4Q9BXJ3 329 aa8.3□□□□□ -1.08
LINC00485-201ENST00000547179 ZNF256Q9Y2P7 627 aaPredicted RBP8.3□□□□□ -1.08
LINC00485-201ENST00000547179 SPINK4O60575 86 aa8.3□□□□□ -1.08
LINC00485-201ENST00000547179 LINC00322Q6ZN03 302 aaPredicted RBP8.3□□□□□ -1.08
LINC00485-201ENST00000547179 ZFAND2AQ8N6M9 145 aa8.3□□□□□ -1.08
LINC00485-201ENST00000547179 NUP35Q8NFH5 326 aa8.3□□□□□ -1.08
LINC00485-201ENST00000547179 TMEM208Q9BTX3 173 aa8.3□□□□□ -1.08
LINC00485-201ENST00000547179 DEFB1P60022 68 aa8.29□□□□□ -1.08
LINC00485-201ENST00000547179 HBBP68871 147 aa8.29□□□□□ -1.08
LINC00485-201ENST00000547179 CLUHP3Q96NS8 147 aa8.29□□□□□ -1.08
LINC00485-201ENST00000547179 INSP01308 110 aa8.29□□□□□ -1.08
LINC00485-201ENST00000547179 SPINK13Q1W4C9 94 aa8.29□□□□□ -1.08
LINC00485-201ENST00000547179 CRIP1P50238 77 aa8.29□□□□□ -1.08
LINC00485-201ENST00000547179 C20orf144Q9BQM9 153 aa8.29□□□□□ -1.08
LINC00485-201ENST00000547179 TRGV11A0A075B6L2 103 aa8.28□□□□□ -1.08
LINC00485-201ENST00000547179 TRAV12-3A0A0B4J271 114 aa8.28□□□□□ -1.08
LINC00485-201ENST00000547179 SNURFLB1AK76 121 aa8.28□□□□□ -1.08
LINC00485-201ENST00000547179 KLLNB2CW77 178 aa8.28□□□□□ -1.08
LINC00485-201ENST00000547179 ZNF80P51504 273 aaPredicted RBP8.28□□□□□ -1.08
LINC00485-201ENST00000547179 CACNG7P62955 275 aa8.28□□□□□ -1.08
LINC00485-201ENST00000547179 MORN3Q6PF18 240 aaPredicted RBP8.28□□□□□ -1.08
LINC00485-201ENST00000547179 APRG1Q8IVJ8 170 aa8.28□□□□□ -1.08
LINC00485-201ENST00000547179 WFDC9Q8NEX5 89 aa8.28□□□□□ -1.08
LINC00485-201ENST00000547179 CAMPP49913 170 aa8.28□□□□□ -1.08
LINC00485-201ENST00000547179 FABP9Q0Z7S8 132 aa8.28□□□□□ -1.08
LINC00485-201ENST00000547179 ODF3L2Q3SX64 289 aa8.28□□□□□ -1.08
LINC00485-201ENST00000547179 PRIMA1Q86XR5 153 aa8.28□□□□□ -1.08
LINC00485-201ENST00000547179 GNB1LQ9BYB4 327 aa8.28□□□□□ -1.08
LINC00485-201ENST00000547179 SETXQ7Z333 2677 aaKnown RBP8.28□□□□□ -1.08
LINC00485-201ENST00000547179 GRIFINA4D1Z8 144 aa8.28□□□□□ -1.08
LINC00485-201ENST00000547179 BEAN1Q3B7T3 259 aa8.28□□□□□ -1.08
LINC00485-201ENST00000547179 GDF5OSQ5U4N7 250 aa8.28□□□□□ -1.08
LINC00485-201ENST00000547179 CELSR1Q9NYQ6 3014 aa8.27□□□□□ -1.08
LINC00485-201ENST00000547179 GZMBP10144 247 aa8.27□□□□□ -1.09
LINC00485-201ENST00000547179 FOXA3P55318 350 aaPredicted RBP8.27□□□□□ -1.09
LINC00485-201ENST00000547179 FAM19A4Q96LR4 140 aa8.27□□□□□ -1.09
LINC00485-201ENST00000547179 CSMD1Q96PZ7 3565 aa8.27□□□□□ -1.09
LINC00485-201ENST00000547179 M0R2Z0 102 aa8.27□□□□□ -1.09
LINC00485-201ENST00000547179 SPANXN1Q5VSR9 72 aa8.27□□□□□ -1.09
LINC00485-201ENST00000547179 YPEL4Q96NS1 127 aa8.27□□□□□ -1.09
LINC00485-201ENST00000547179 VPS13CQ709C8 3753 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms