RNA–Protein interactions for RNA: ENST00000547063.5

TRAFD1-203, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 3

Gene TRAFD1, Length 867 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-203ENST00000547063 S100A1P23297 94 aa11.65□□□□□ -0.54
TRAFD1-203ENST00000547063 APOC4P55056 127 aa11.65□□□□□ -0.54
TRAFD1-203ENST00000547063 SPINK13Q1W4C9 94 aa11.65□□□□□ -0.54
TRAFD1-203ENST00000547063 FAM162BQ5T6X4 162 aa11.65□□□□□ -0.54
TRAFD1-203ENST00000547063 KIR2DL5AQ8N109 375 aa11.65□□□□□ -0.54
TRAFD1-203ENST00000547063 SVBPQ8N300 66 aa11.65□□□□□ -0.54
TRAFD1-203ENST00000547063 KIR2DL5BQ8NHK3 375 aa11.65□□□□□ -0.54
TRAFD1-203ENST00000547063 DAZAP1Q96EP5 407 aaKnown RBP11.65□□□□□ -0.54
TRAFD1-203ENST00000547063 ZC2HC1AQ96GY0 325 aa11.65□□□□□ -0.54
TRAFD1-203ENST00000547063 C20orf144Q9BQM9 153 aa11.65□□□□□ -0.54
TRAFD1-203ENST00000547063 PKD1L1Q8TDX9 2849 aa11.65□□□□□ -0.54
TRAFD1-203ENST00000547063 TRAV21A0A0B4J279 112 aa11.64□□□□□ -0.55
TRAFD1-203ENST00000547063 C7orf71A4D174 169 aa11.64□□□□□ -0.55
TRAFD1-203ENST00000547063 RBMY1BA6NDE4 496 aaKnown RBP11.64□□□□□ -0.55
TRAFD1-203ENST00000547063 RBMY1EA6NEQ0 496 aaKnown RBP11.64□□□□□ -0.55
TRAFD1-203ENST00000547063 FABP5P3A8MUU1 101 aa11.64□□□□□ -0.55
TRAFD1-203ENST00000547063 M0R2Z0 102 aa11.64□□□□□ -0.55
TRAFD1-203ENST00000547063 APOC3P02656 99 aa11.64□□□□□ -0.55
TRAFD1-203ENST00000547063 PFN1P07737 140 aaKnown RBP11.64□□□□□ -0.55
TRAFD1-203ENST00000547063 RBMY1DP0C7P1 496 aaKnown RBP11.64□□□□□ -0.55
TRAFD1-203ENST00000547063 IGHV4-30-4P0DP06 118 aa11.64□□□□□ -0.55
TRAFD1-203ENST00000547063 RPL35AP18077 110 aaKnown RBP11.64□□□□□ -0.55
TRAFD1-203ENST00000547063 RNASE4P34096 147 aaKnown RBP11.64□□□□□ -0.55
TRAFD1-203ENST00000547063 PRR27Q6MZM9 219 aa11.64□□□□□ -0.55
TRAFD1-203ENST00000547063 MGAM2Q2M2H8 2515 aa11.63□□□□□ -0.55
TRAFD1-203ENST00000547063 K7EN84 100 aa11.63□□□□□ -0.55
TRAFD1-203ENST00000547063 M0R036 132 aa11.63□□□□□ -0.55
TRAFD1-203ENST00000547063 SNAPINO95295 136 aa11.63□□□□□ -0.55
TRAFD1-203ENST00000547063 INSP01308 110 aa11.63□□□□□ -0.55
TRAFD1-203ENST00000547063 Q6AWC8 147 aa11.63□□□□□ -0.55
TRAFD1-203ENST00000547063 FAM231DQ6ZW35 169 aa11.63□□□□□ -0.55
TRAFD1-203ENST00000547063 C15orf54Q8N8G6 183 aa11.63□□□□□ -0.55
TRAFD1-203ENST00000547063 ISOC2Q96AB3 205 aa11.63□□□□□ -0.55
TRAFD1-203ENST00000547063 CSTL1Q9H114 145 aa11.63□□□□□ -0.55
TRAFD1-203ENST00000547063 AURKAIP1Q9NWT8 199 aaPredicted RBP11.63□□□□□ -0.55
TRAFD1-203ENST00000547063 TRRAPQ9Y4A5 3859 aa11.63□□□□□ -0.55
TRAFD1-203ENST00000547063 J3KRW8 73 aa11.62□□□□□ -0.55
TRAFD1-203ENST00000547063 UBE2CO00762 179 aa11.62□□□□□ -0.55
TRAFD1-203ENST00000547063 ATP6V1G1O75348 118 aa11.62□□□□□ -0.55
TRAFD1-203ENST00000547063 ERVFC1-1P60608 527 aa11.62□□□□□ -0.55
TRAFD1-203ENST00000547063 PPP1R2P9O14990 202 aa11.61□□□□□ -0.55
TRAFD1-203ENST00000547063 CA1P00915 261 aaPredicted RBP11.61□□□□□ -0.55
TRAFD1-203ENST00000547063 P01737 135 aa11.61□□□□□ -0.55
TRAFD1-203ENST00000547063 MT-ND4LP03901 98 aa11.61□□□□□ -0.55
TRAFD1-203ENST00000547063 FXYD7P58549 80 aa11.61□□□□□ -0.55
TRAFD1-203ENST00000547063 OR5I1Q13606 314 aa11.61□□□□□ -0.55
TRAFD1-203ENST00000547063 RHEBQ15382 184 aa11.61□□□□□ -0.55
TRAFD1-203ENST00000547063 IBA57Q5T440 356 aaKnown RBP11.61□□□□□ -0.55
TRAFD1-203ENST00000547063 GFI1BQ5VTD9 330 aa11.61□□□□□ -0.55
TRAFD1-203ENST00000547063 TMEM256Q8N2U0 113 aa11.61□□□□□ -0.55
TRAFD1-203ENST00000547063 SFRP2Q96HF1 295 aa11.61□□□□□ -0.55
TRAFD1-203ENST00000547063 OSTCQ9NRP0 149 aa11.61□□□□□ -0.55
TRAFD1-203ENST00000547063 ANK2Q01484 3957 aa11.61□□□□□ -0.55
TRAFD1-203ENST00000547063 TRAV12-2A0A075B6T6 113 aa11.6□□□□□ -0.55
TRAFD1-203ENST00000547063 C19orf71A6NCJ1 209 aa11.6□□□□□ -0.55
TRAFD1-203ENST00000547063 CRXO43186 299 aaPredicted RBP11.6□□□□□ -0.55
TRAFD1-203ENST00000547063 SH2D1AO60880 128 aa11.6□□□□□ -0.55
TRAFD1-203ENST00000547063 ZNF80P51504 273 aaPredicted RBP11.6□□□□□ -0.55
TRAFD1-203ENST00000547063 BTN1A1Q13410 526 aa11.6□□□□□ -0.55
TRAFD1-203ENST00000547063 PRR9Q5T870 116 aa11.6□□□□□ -0.55
TRAFD1-203ENST00000547063 CLRN3Q8NCR9 226 aa11.6□□□□□ -0.55
TRAFD1-203ENST00000547063 ANAPC16Q96DE5 110 aa11.6□□□□□ -0.55
TRAFD1-203ENST00000547063 XCL2Q9UBD3 114 aa11.6□□□□□ -0.55
TRAFD1-203ENST00000547063 TRAV12-3A0A0B4J271 114 aa11.59□□□□□ -0.55
TRAFD1-203ENST00000547063 XKRY2A2RUG3 117 aa11.59□□□□□ -0.55
TRAFD1-203ENST00000547063 CRIP1P50238 77 aa11.59□□□□□ -0.55
TRAFD1-203ENST00000547063 LINC00322Q6ZN03 302 aaPredicted RBP11.59□□□□□ -0.55
TRAFD1-203ENST00000547063 OR10G8Q8NGN5 311 aa11.59□□□□□ -0.55
TRAFD1-203ENST00000547063 KCNS1Q96KK3 526 aa11.59□□□□□ -0.55
TRAFD1-203ENST00000547063 GOLT1BQ9Y3E0 138 aa11.59□□□□□ -0.55
TRAFD1-203ENST00000547063 ZNF705GA8MUZ8 300 aaPredicted RBP11.58□□□□□ -0.56
TRAFD1-203ENST00000547063 H7BYZ3 331 aa11.58□□□□□ -0.56
TRAFD1-203ENST00000547063 GATCO43716 136 aaKnown RBP11.58□□□□□ -0.56
TRAFD1-203ENST00000547063 ZNF324O75467 553 aaPredicted RBP11.58□□□□□ -0.56
TRAFD1-203ENST00000547063 ORM1P02763 201 aa11.58□□□□□ -0.56
TRAFD1-203ENST00000547063 RPS20P60866 119 aaKnown RBP11.58□□□□□ -0.56
TRAFD1-203ENST00000547063 KIR3DS1Q14943 382 aa11.58□□□□□ -0.56
TRAFD1-203ENST00000547063 FAM159AQ6UWV7 190 aa11.58□□□□□ -0.56
TRAFD1-203ENST00000547063 NUDT10Q8NFP7 164 aa11.58□□□□□ -0.56
TRAFD1-203ENST00000547063 NUDT11Q96G61 164 aa11.58□□□□□ -0.56
TRAFD1-203ENST00000547063 PYGO2Q9BRQ0 406 aa11.58□□□□□ -0.56
TRAFD1-203ENST00000547063 TMEM208Q9BTX3 173 aa11.58□□□□□ -0.56
TRAFD1-203ENST00000547063 CTDSP1Q9GZU7 261 aa11.58□□□□□ -0.56
TRAFD1-203ENST00000547063 RNASE7Q9H1E1 156 aaKnown RBP11.58□□□□□ -0.56
TRAFD1-203ENST00000547063 A0A087WWC5 75 aa11.57□□□□□ -0.56
TRAFD1-203ENST00000547063 TMEM189A5PLL7 270 aa11.57□□□□□ -0.56
TRAFD1-203ENST00000547063 GIG44P09565 113 aaPredicted RBP11.57□□□□□ -0.56
TRAFD1-203ENST00000547063 LINC01559Q495D7 138 aa11.57□□□□□ -0.56
TRAFD1-203ENST00000547063 CT83Q5H943 113 aa11.57□□□□□ -0.56
TRAFD1-203ENST00000547063 RPP21Q9H633 154 aaKnown RBP11.57□□□□□ -0.56
TRAFD1-203ENST00000547063 NOTCH1P46531 2555 aa11.56□□□□□ -0.56
TRAFD1-203ENST00000547063 C7orf77A4D0Y5 90 aa11.56□□□□□ -0.56
TRAFD1-203ENST00000547063 FRMD6-AS1P0C7T7 363 aa11.56□□□□□ -0.56
TRAFD1-203ENST00000547063 TDRG1Q3Y452 100 aa11.56□□□□□ -0.56
TRAFD1-203ENST00000547063 RNF212Q495C1 297 aa11.56□□□□□ -0.56
TRAFD1-203ENST00000547063 OR2D3Q8NGH3 330 aa11.56□□□□□ -0.56
TRAFD1-203ENST00000547063 LINC01587Q99440 93 aa11.56□□□□□ -0.56
TRAFD1-203ENST00000547063 LINC00467Q9BRT7 94 aa11.56□□□□□ -0.56
TRAFD1-203ENST00000547063 IGHV1OR15-1A0A075B7D0 117 aa11.55□□□□□ -0.56
TRAFD1-203ENST00000547063 A8MWL6 223 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms