RNA–Protein interactions for RNA: ENST00000546490.1

CHPT1-202, Transcript of choline phosphotransferase 1, humanhuman

TSL 2

Gene CHPT1, Length 476 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPT1-202ENST00000546490 PET100P0DJ07 73 aa12.9□□□□□ -0.34
CHPT1-202ENST00000546490 UBE2L3P68036 154 aaKnown RBP12.9□□□□□ -0.34
CHPT1-202ENST00000546490 DNAH5Q8TE73 4624 aa12.89□□□□□ -0.35
CHPT1-202ENST00000546490 RBAKDNA6NC62 111 aa12.89□□□□□ -0.35
CHPT1-202ENST00000546490 IGHV3-53P01767 116 aa12.89□□□□□ -0.35
CHPT1-202ENST00000546490 KHDC3LQ587J8 217 aa12.89□□□□□ -0.35
CHPT1-202ENST00000546490 LYPD1Q8N2G4 141 aa12.89□□□□□ -0.35
CHPT1-202ENST00000546490 MAPKAPK5-AS1Q8N8E1 139 aa12.89□□□□□ -0.35
CHPT1-202ENST00000546490 PPP1R1CQ8WVI7 109 aa12.89□□□□□ -0.35
CHPT1-202ENST00000546490 PRO0255Q9UI72 69 aa12.89□□□□□ -0.35
CHPT1-202ENST00000546490 INMT-MINDY4F8WBC2 141 aa12.88□□□□□ -0.35
CHPT1-202ENST00000546490 SIVA1O15304 175 aa12.88□□□□□ -0.35
CHPT1-202ENST00000546490 LINC00315P59091 139 aa12.88□□□□□ -0.35
CHPT1-202ENST00000546490 RANP62826 216 aaKnown RBP12.88□□□□□ -0.35
CHPT1-202ENST00000546490 SLAQ13239 276 aa12.88□□□□□ -0.35
CHPT1-202ENST00000546490 Q6ZQT7 251 aa12.88□□□□□ -0.35
CHPT1-202ENST00000546490 KRTAP4-5Q9BYR2 181 aa12.88□□□□□ -0.35
CHPT1-202ENST00000546490 H2BFSP57053 126 aa12.87□□□□□ -0.35
CHPT1-202ENST00000546490 TAS2R45P59539 299 aa12.87□□□□□ -0.35
CHPT1-202ENST00000546490 ZNF266Q14584 549 aa12.87□□□□□ -0.35
CHPT1-202ENST00000546490 FFAR4Q5NUL3 377 aa12.87□□□□□ -0.35
CHPT1-202ENST00000546490 HSPB11Q9Y547 144 aa12.87□□□□□ -0.35
CHPT1-202ENST00000546490 NXPH4O95158 308 aa12.86□□□□□ -0.35
CHPT1-202ENST00000546490 MUC21Q5SSG8 566 aa12.86□□□□□ -0.35
CHPT1-202ENST00000546490 SSNA1O43805 119 aa12.85□□□□□ -0.35
CHPT1-202ENST00000546490 IFNA5P01569 189 aa12.85□□□□□ -0.35
CHPT1-202ENST00000546490 CRYBA4P53673 196 aa12.85□□□□□ -0.35
CHPT1-202ENST00000546490 SCGB1C1Q8TD33 95 aa12.85□□□□□ -0.35
CHPT1-202ENST00000546490 C8orf49Q96NF6 230 aa12.85□□□□□ -0.35
CHPT1-202ENST00000546490 HHLA3Q9XRX5 114 aa12.85□□□□□ -0.35
CHPT1-202ENST00000546490 LENEPQ9Y5L5 61 aa12.85□□□□□ -0.35
CHPT1-202ENST00000546490 TRGV11A0A075B6L2 103 aa12.84□□□□□ -0.35
CHPT1-202ENST00000546490 MPC2O95563 127 aa12.84□□□□□ -0.35
CHPT1-202ENST00000546490 KRTAP10-2P60368 255 aa12.84□□□□□ -0.35
CHPT1-202ENST00000546490 IFITM3Q01628 133 aa12.84□□□□□ -0.35
CHPT1-202ENST00000546490 MRPL23Q16540 153 aaKnown RBP12.84□□□□□ -0.35
CHPT1-202ENST00000546490 Q6AWC8 147 aa12.84□□□□□ -0.35
CHPT1-202ENST00000546490 FAM159AQ6UWV7 190 aa12.84□□□□□ -0.35
CHPT1-202ENST00000546490 MARVELD1Q9BSK0 173 aa12.84□□□□□ -0.35
CHPT1-202ENST00000546490 TRGV4A0A0C4DH28 118 aa12.83□□□□□ -0.36
CHPT1-202ENST00000546490 DIRC3C9JPN6 131 aa12.83□□□□□ -0.36
CHPT1-202ENST00000546490 RPL12P30050 165 aaKnown RBP12.83□□□□□ -0.36
CHPT1-202ENST00000546490 FHL2Q14192 279 aa12.83□□□□□ -0.36
CHPT1-202ENST00000546490 FAM74A1Q5RGS3 127 aa12.83□□□□□ -0.36
CHPT1-202ENST00000546490 TMED6Q8WW62 240 aa12.83□□□□□ -0.36
CHPT1-202ENST00000546490 SPXQ9BT56 116 aa12.83□□□□□ -0.36
CHPT1-202ENST00000546490 SMIM3Q9BZL3 60 aa12.83□□□□□ -0.36
CHPT1-202ENST00000546490 PTTG2Q9NZH5 202 aa12.83□□□□□ -0.36
CHPT1-202ENST00000546490 DEFA1P59665 94 aa12.82□□□□□ -0.36
CHPT1-202ENST00000546490 DEFA3P59666 94 aa12.82□□□□□ -0.36
CHPT1-202ENST00000546490 TMEM183BQ1AE95 376 aa12.82□□□□□ -0.36
CHPT1-202ENST00000546490 Q6ZRN7 208 aaPredicted RBP12.82□□□□□ -0.36
CHPT1-202ENST00000546490 NEGR1Q7Z3B1 354 aa12.82□□□□□ -0.36
CHPT1-202ENST00000546490 TMEM183AQ8IXX5 376 aa12.82□□□□□ -0.36
CHPT1-202ENST00000546490 CMTM2Q8TAZ6 248 aa12.82□□□□□ -0.36
CHPT1-202ENST00000546490 PCNPQ8WW12 178 aaKnown RBP12.82□□□□□ -0.36
CHPT1-202ENST00000546490 MDFICQ9P1T7 246 aa12.82□□□□□ -0.36
CHPT1-202ENST00000546490 RPH3ALQ9UNE2 315 aa12.82□□□□□ -0.36
CHPT1-202ENST00000546490 SRIP30626 198 aa12.81□□□□□ -0.36
CHPT1-202ENST00000546490 OR10G4Q8NGN3 311 aa12.81□□□□□ -0.36
CHPT1-202ENST00000546490 HYLS1Q96M11 299 aa12.81□□□□□ -0.36
CHPT1-202ENST00000546490 OTORQ9NRC9 128 aa12.81□□□□□ -0.36
CHPT1-202ENST00000546490 MBD2Q9UBB5 411 aa12.81□□□□□ -0.36
CHPT1-202ENST00000546490 NAGKQ9UJ70 344 aa12.81□□□□□ -0.36
CHPT1-202ENST00000546490 EREGO14944 169 aa12.8□□□□□ -0.36
CHPT1-202ENST00000546490 SFTA3P0C7M3 94 aa12.8□□□□□ -0.36
CHPT1-202ENST00000546490 ERVFC1-1P60608 527 aa12.8□□□□□ -0.36
CHPT1-202ENST00000546490 ACOT6Q3I5F7 207 aaPredicted RBP12.8□□□□□ -0.36
CHPT1-202ENST00000546490 LYPD5Q6UWN5 251 aa12.8□□□□□ -0.36
CHPT1-202ENST00000546490 PQLC2Q6ZP29 291 aa12.8□□□□□ -0.36
CHPT1-202ENST00000546490 Q8N1X5 172 aa12.8□□□□□ -0.36
CHPT1-202ENST00000546490 RASL10AQ92737 203 aa12.8□□□□□ -0.36
CHPT1-202ENST00000546490 K7EQD1 137 aa12.79□□□□□ -0.36
CHPT1-202ENST00000546490 ORM1P02763 201 aa12.79□□□□□ -0.36
CHPT1-202ENST00000546490 TDRG1Q3Y452 100 aa12.79□□□□□ -0.36
CHPT1-202ENST00000546490 NFE4Q86UQ8 179 aa12.79□□□□□ -0.36
CHPT1-202ENST00000546490 IQCF2Q8IXL9 164 aa12.79□□□□□ -0.36
CHPT1-202ENST00000546490 ZNF479Q96JC4 524 aa12.79□□□□□ -0.36
CHPT1-202ENST00000546490 LY96Q9Y6Y9 160 aa12.79□□□□□ -0.36
CHPT1-202ENST00000546490 TRAV9-2A0A087WT02 112 aa12.78□□□□□ -0.36
CHPT1-202ENST00000546490 A0A1W2PPV4 95 aa12.78□□□□□ -0.36
CHPT1-202ENST00000546490 PGPA6NDG6 321 aa12.78□□□□□ -0.36
CHPT1-202ENST00000546490 EIF3GO75821 320 aaKnown RBP eCLIP12.78□□□□□ -0.36
CHPT1-202ENST00000546490 GOLT1AQ6ZVE7 132 aa12.78□□□□□ -0.36
CHPT1-202ENST00000546490 TRAV4A0A0B4J268 109 aa12.77□□□□□ -0.37
CHPT1-202ENST00000546490 TRAV21A0A0B4J279 112 aa12.77□□□□□ -0.37
CHPT1-202ENST00000546490 C9JCJ5 164 aa12.77□□□□□ -0.37
CHPT1-202ENST00000546490 GYPEP15421 78 aa12.77□□□□□ -0.37
CHPT1-202ENST00000546490 ARL6IP6Q8N6S5 226 aa12.77□□□□□ -0.37
CHPT1-202ENST00000546490 TXNDC17Q9BRA2 123 aa12.77□□□□□ -0.37
CHPT1-202ENST00000546490 K7EP13 123 aa12.76□□□□□ -0.37
CHPT1-202ENST00000546490 RAB2AP61019 212 aa12.76□□□□□ -0.37
CHPT1-202ENST00000546490 SCRT2Q9NQ03 307 aa12.76□□□□□ -0.37
CHPT1-202ENST00000546490 A6NHS1 94 aa12.75□□□□□ -0.37
CHPT1-202ENST00000546490 F6UZH7 168 aa12.75□□□□□ -0.37
CHPT1-202ENST00000546490 M0R2P5 195 aa12.75□□□□□ -0.37
CHPT1-202ENST00000546490 CDPF1Q6NVV7 123 aa12.75□□□□□ -0.37
CHPT1-202ENST00000546490 WFDC10BQ8IUB3 73 aa12.75□□□□□ -0.37
CHPT1-202ENST00000546490 OR4C5Q8NGB2 326 aa12.75□□□□□ -0.37
CHPT1-202ENST00000546490 WFDC1Q9HC57 220 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms