RNA–Protein interactions for RNA: ENST00000546039.5

PAAF1-216, Transcript of proteasomal ATPase associated factor 1, humanhuman

TSL 3

Gene PAAF1, Length 805 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1-216ENST00000546039 ZFP30Q9Y2G7 519 aa7.85□□□□□ -1.15
PAAF1-216ENST00000546039 PRKDCP78527 4128 aaKnown RBP7.85□□□□□ -1.15
PAAF1-216ENST00000546039 TRAV12-2A0A075B6T6 113 aa7.84□□□□□ -1.15
PAAF1-216ENST00000546039 J3KRW8 73 aa7.84□□□□□ -1.15
PAAF1-216ENST00000546039 SPRY2O43597 315 aa7.84□□□□□ -1.15
PAAF1-216ENST00000546039 SRP19P09132 144 aaKnown RBP7.84□□□□□ -1.15
PAAF1-216ENST00000546039 NHLRC4P0CG21 123 aaPredicted RBP7.84□□□□□ -1.15
PAAF1-216ENST00000546039 BTN1A1Q13410 526 aa7.84□□□□□ -1.15
PAAF1-216ENST00000546039 SMUG1Q53HV7 270 aa7.84□□□□□ -1.15
PAAF1-216ENST00000546039 PRR9Q5T870 116 aa7.84□□□□□ -1.15
PAAF1-216ENST00000546039 TVP23CQ96ET8 276 aa7.84□□□□□ -1.15
PAAF1-216ENST00000546039 NIPSNAP3BQ9BS92 247 aa7.84□□□□□ -1.15
PAAF1-216ENST00000546039 DERL1Q9BUN8 251 aa7.84□□□□□ -1.15
PAAF1-216ENST00000546039 TRAV12-3A0A0B4J271 114 aa7.83□□□□□ -1.16
PAAF1-216ENST00000546039 RNASE4P34096 147 aaKnown RBP7.83□□□□□ -1.16
PAAF1-216ENST00000546039 KIR3DS1Q14943 382 aa7.83□□□□□ -1.16
PAAF1-216ENST00000546039 CENPWQ5EE01 88 aa7.83□□□□□ -1.16
PAAF1-216ENST00000546039 Q6AWC8 147 aa7.83□□□□□ -1.16
PAAF1-216ENST00000546039 ZNF705AQ6ZN79 300 aaPredicted RBP7.83□□□□□ -1.16
PAAF1-216ENST00000546039 COX8CQ7Z4L0 72 aa7.83□□□□□ -1.16
PAAF1-216ENST00000546039 BAGE2Q86Y30 109 aa7.83□□□□□ -1.16
PAAF1-216ENST00000546039 TMEM183AQ8IXX5 376 aa7.83□□□□□ -1.16
PAAF1-216ENST00000546039 SMIM12Q96EX1 92 aa7.83□□□□□ -1.16
PAAF1-216ENST00000546039 C8orf49Q96NF6 230 aa7.83□□□□□ -1.16
PAAF1-216ENST00000546039 OVOL2Q9BRP0 275 aa7.83□□□□□ -1.16
PAAF1-216ENST00000546039 TMEM208Q9BTX3 173 aa7.83□□□□□ -1.16
PAAF1-216ENST00000546039 PARLQ9H300 379 aa7.83□□□□□ -1.16
PAAF1-216ENST00000546039 TRAV21A0A0B4J279 112 aa7.82□□□□□ -1.16
PAAF1-216ENST00000546039 C9JCJ5 164 aa7.82□□□□□ -1.16
PAAF1-216ENST00000546039 H7BYZ3 331 aa7.82□□□□□ -1.16
PAAF1-216ENST00000546039 GCGP01275 180 aa7.82□□□□□ -1.16
PAAF1-216ENST00000546039 RBMY1A1P0DJD3 496 aaKnown RBP7.82□□□□□ -1.16
PAAF1-216ENST00000546039 RBMY1CP0DJD4 496 aa7.82□□□□□ -1.16
PAAF1-216ENST00000546039 GNG4P50150 75 aa7.82□□□□□ -1.16
PAAF1-216ENST00000546039 CEBPGP53567 150 aa7.82□□□□□ -1.16
PAAF1-216ENST00000546039 RBMY1FQ15415 496 aaKnown RBP7.82□□□□□ -1.16
PAAF1-216ENST00000546039 C1orf158Q8N1D5 194 aa7.82□□□□□ -1.16
PAAF1-216ENST00000546039 NEU1Q99519 415 aa7.82□□□□□ -1.16
PAAF1-216ENST00000546039 PYGO2Q9BRQ0 406 aa7.82□□□□□ -1.16
PAAF1-216ENST00000546039 RETNQ9HD89 108 aa7.82□□□□□ -1.16
PAAF1-216ENST00000546039 IGHV3OR16-12A0A075B7B8 117 aa7.81□□□□□ -1.16
PAAF1-216ENST00000546039 LINC00862A6NCI5 91 aa7.81□□□□□ -1.16
PAAF1-216ENST00000546039 SMIM9A6NGZ8 99 aa7.81□□□□□ -1.16
PAAF1-216ENST00000546039 ZNF324O75467 553 aaPredicted RBP7.81□□□□□ -1.16
PAAF1-216ENST00000546039 PFN1P07737 140 aaKnown RBP7.81□□□□□ -1.16
PAAF1-216ENST00000546039 SRSF3P84103 164 aaKnown RBP7.81□□□□□ -1.16
PAAF1-216ENST00000546039 ZNF674Q2M3X9 581 aa7.81□□□□□ -1.16
PAAF1-216ENST00000546039 FAM74A3Q4VXF1 159 aa7.81□□□□□ -1.16
PAAF1-216ENST00000546039 UQCC3Q6UW78 93 aa7.81□□□□□ -1.16
PAAF1-216ENST00000546039 OR11H2Q8NH07 326 aa7.81□□□□□ -1.16
PAAF1-216ENST00000546039 ZC2HC1AQ96GY0 325 aa7.81□□□□□ -1.16
PAAF1-216ENST00000546039 SMIM7Q9BQ49 75 aa7.81□□□□□ -1.16
PAAF1-216ENST00000546039 MLST8Q9BVC4 326 aa7.81□□□□□ -1.16
PAAF1-216ENST00000546039 TRBV20OR9-2A0A075B6H5 130 aa7.8□□□□□ -1.16
PAAF1-216ENST00000546039 MIFP14174 115 aa7.8□□□□□ -1.16
PAAF1-216ENST00000546039 ZNF80P51504 273 aaPredicted RBP7.8□□□□□ -1.16
PAAF1-216ENST00000546039 FAM162BQ5T6X4 162 aa7.8□□□□□ -1.16
PAAF1-216ENST00000546039 COMMD7Q86VX2 200 aa7.8□□□□□ -1.16
PAAF1-216ENST00000546039 NHLRC2Q8NBF2 726 aa7.8□□□□□ -1.16
PAAF1-216ENST00000546039 LINC01587Q99440 93 aa7.8□□□□□ -1.16
PAAF1-216ENST00000546039 LINC00467Q9BRT7 94 aa7.8□□□□□ -1.16
PAAF1-216ENST00000546039 BIN3Q9NQY0 253 aa7.8□□□□□ -1.16
PAAF1-216ENST00000546039 X6R8D5 127 aa7.8□□□□□ -1.16
PAAF1-216ENST00000546039 TENM3Q9P273 2699 aa7.79□□□□□ -1.16
PAAF1-216ENST00000546039 FABP5P3A8MUU1 101 aa7.79□□□□□ -1.16
PAAF1-216ENST00000546039 ZNF727A8MUV8 499 aa7.79□□□□□ -1.16
PAAF1-216ENST00000546039 C9JQL5 133 aa7.79□□□□□ -1.16
PAAF1-216ENST00000546039 RRN3P1Q2M238 152 aa7.79□□□□□ -1.16
PAAF1-216ENST00000546039 SOHLH1Q5JUK2 328 aa7.79□□□□□ -1.16
PAAF1-216ENST00000546039 EIF4E3Q8N5X7 224 aaKnown RBP7.79□□□□□ -1.16
PAAF1-216ENST00000546039 LY96Q9Y6Y9 160 aa7.79□□□□□ -1.16
PAAF1-216ENST00000546039 NBEAL2Q6ZNJ1 2754 aa7.79□□□□□ -1.16
PAAF1-216ENST00000546039 IGHV1OR15-1A0A075B7D0 117 aa7.78□□□□□ -1.16
PAAF1-216ENST00000546039 SH2D1AO60880 128 aa7.78□□□□□ -1.16
PAAF1-216ENST00000546039 IGLV2-8P01709 118 aa7.78□□□□□ -1.16
PAAF1-216ENST00000546039 MGST1P10620 155 aaKnown RBP7.78□□□□□ -1.16
PAAF1-216ENST00000546039 TDRG1Q3Y452 100 aa7.78□□□□□ -1.16
PAAF1-216ENST00000546039 FAM159AQ6UWV7 190 aa7.78□□□□□ -1.16
PAAF1-216ENST00000546039 Q8NAQ8 132 aa7.78□□□□□ -1.16
PAAF1-216ENST00000546039 TMEM263Q8WUH6 116 aaKnown RBP7.78□□□□□ -1.16
PAAF1-216ENST00000546039 KCNS1Q96KK3 526 aa7.78□□□□□ -1.16
PAAF1-216ENST00000546039 C11orf68Q9H3H3 251 aaKnown RBP7.78□□□□□ -1.16
PAAF1-216ENST00000546039 NAGKQ9UJ70 344 aa7.78□□□□□ -1.16
PAAF1-216ENST00000546039 COL7A1Q02388 2944 aa7.77□□□□□ -1.17
PAAF1-216ENST00000546039 TRGV11A0A075B6L2 103 aa7.77□□□□□ -1.17
PAAF1-216ENST00000546039 IGHV4-28A0A0C4DH34 117 aa7.77□□□□□ -1.17
PAAF1-216ENST00000546039 TMEM189A5PLL7 270 aa7.77□□□□□ -1.17
PAAF1-216ENST00000546039 PGPEP1LA6NFU8 196 aa7.77□□□□□ -1.17
PAAF1-216ENST00000546039 CBY3A6NI87 242 aa7.77□□□□□ -1.17
PAAF1-216ENST00000546039 ZNF705GA8MUZ8 300 aaPredicted RBP7.77□□□□□ -1.17
PAAF1-216ENST00000546039 SFTA3P0C7M3 94 aa7.77□□□□□ -1.17
PAAF1-216ENST00000546039 ANXA2RQ3ZCQ2 193 aa7.77□□□□□ -1.17
PAAF1-216ENST00000546039 MUC21Q5SSG8 566 aa7.77□□□□□ -1.17
PAAF1-216ENST00000546039 PRR27Q6MZM9 219 aa7.77□□□□□ -1.17
PAAF1-216ENST00000546039 Q6ZQT7 251 aa7.77□□□□□ -1.17
PAAF1-216ENST00000546039 ZNF493Q6ZR52 646 aa7.77□□□□□ -1.17
PAAF1-216ENST00000546039 C16orf74Q96GX8 76 aa7.77□□□□□ -1.17
PAAF1-216ENST00000546039 SDF2L1Q9HCN8 221 aa7.77□□□□□ -1.17
PAAF1-216ENST00000546039 U3KQK5 164 aa7.77□□□□□ -1.17
PAAF1-216ENST00000546039 DNAH9Q9NYC9 4486 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 232.4 ms