RNA–Protein interactions for RNA: ENST00000545584.1

CHD4-213, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 4

Gene CHD4, Length 553 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-213ENST00000545584 ZNF266Q14584 549 aa13.78□□□□□ -0.2
CHD4-213ENST00000545584 FAM74A1Q5RGS3 127 aa13.78□□□□□ -0.2
CHD4-213ENST00000545584 CMTM2Q8TAZ6 248 aa13.78□□□□□ -0.2
CHD4-213ENST00000545584 MRPS16Q9Y3D3 137 aaKnown RBP13.78□□□□□ -0.2
CHD4-213ENST00000545584 HERC2O95714 4834 aa13.77□□□□□ -0.2
CHD4-213ENST00000545584 DIRC3C9JPN6 131 aa13.77□□□□□ -0.21
CHD4-213ENST00000545584 VSIG2Q96IQ7 327 aa13.77□□□□□ -0.21
CHD4-213ENST00000545584 ST6GAL2Q96JF0 529 aa13.77□□□□□ -0.21
CHD4-213ENST00000545584 HYLS1Q96M11 299 aa13.77□□□□□ -0.21
CHD4-213ENST00000545584 KRTAP17-1Q9BYP8 105 aa13.77□□□□□ -0.21
CHD4-213ENST00000545584 LENEPQ9Y5L5 61 aa13.77□□□□□ -0.21
CHD4-213ENST00000545584 A0A096LPF7 62 aa13.76□□□□□ -0.21
CHD4-213ENST00000545584 PQLC2Q6ZP29 291 aa13.76□□□□□ -0.21
CHD4-213ENST00000545584 Q6ZQT7 251 aa13.76□□□□□ -0.21
CHD4-213ENST00000545584 ZNF575Q86XF7 245 aa13.76□□□□□ -0.21
CHD4-213ENST00000545584 OTORQ9NRC9 128 aa13.76□□□□□ -0.21
CHD4-213ENST00000545584 MRPL16Q9NX20 251 aaKnown RBP13.76□□□□□ -0.21
CHD4-213ENST00000545584 PGPA6NDG6 321 aa13.75□□□□□ -0.21
CHD4-213ENST00000545584 PAX4O43316 350 aa13.75□□□□□ -0.21
CHD4-213ENST00000545584 IGHV3-53P01767 116 aa13.75□□□□□ -0.21
CHD4-213ENST00000545584 SLAQ13239 276 aa13.75□□□□□ -0.21
CHD4-213ENST00000545584 MUC21Q5SSG8 566 aa13.75□□□□□ -0.21
CHD4-213ENST00000545584 WFDC1Q9HC57 220 aa13.75□□□□□ -0.21
CHD4-213ENST00000545584 MUC4Q99102 2169 aa13.75□□□□□ -0.21
CHD4-213ENST00000545584 A0A1W2PPQ1 181 aa13.74□□□□□ -0.21
CHD4-213ENST00000545584 EIF3GO75821 320 aaKnown RBP eCLIP13.74□□□□□ -0.21
CHD4-213ENST00000545584 FAM159AQ6UWV7 190 aa13.74□□□□□ -0.21
CHD4-213ENST00000545584 TMED6Q8WW62 240 aa13.74□□□□□ -0.21
CHD4-213ENST00000545584 PRO0255Q9UI72 69 aa13.74□□□□□ -0.21
CHD4-213ENST00000545584 RPH3ALQ9UNE2 315 aa13.74□□□□□ -0.21
CHD4-213ENST00000545584 ALG5Q9Y673 324 aa13.74□□□□□ -0.21
CHD4-213ENST00000545584 ICOSQ9Y6W8 199 aa13.74□□□□□ -0.21
CHD4-213ENST00000545584 PKHD1P08F94 4074 aa13.73□□□□□ -0.21
CHD4-213ENST00000545584 TRGV11A0A075B6L2 103 aa13.73□□□□□ -0.21
CHD4-213ENST00000545584 Q6AWC8 147 aa13.73□□□□□ -0.21
CHD4-213ENST00000545584 C16orf90A8MZG2 172 aa13.72□□□□□ -0.21
CHD4-213ENST00000545584 RAB2AP61019 212 aa13.72□□□□□ -0.21
CHD4-213ENST00000545584 ARL6IP6Q8N6S5 226 aa13.72□□□□□ -0.21
CHD4-213ENST00000545584 OR10G4Q8NGN3 311 aa13.72□□□□□ -0.21
CHD4-213ENST00000545584 OR10G9Q8NGN4 311 aa13.72□□□□□ -0.21
CHD4-213ENST00000545584 OR10G7Q8NGN6 311 aa13.72□□□□□ -0.21
CHD4-213ENST00000545584 HHLA3Q9XRX5 114 aa13.72□□□□□ -0.21
CHD4-213ENST00000545584 KIAA1109Q2LD37 5005 aa13.72□□□□□ -0.21
CHD4-213ENST00000545584 BTF3P20290 206 aaKnown RBP13.71□□□□□ -0.21
CHD4-213ENST00000545584 TMEM183BQ1AE95 376 aa13.71□□□□□ -0.21
CHD4-213ENST00000545584 GOLT1AQ6ZVE7 132 aa13.71□□□□□ -0.21
CHD4-213ENST00000545584 TMEM183AQ8IXX5 376 aa13.71□□□□□ -0.21
CHD4-213ENST00000545584 SPXQ9BT56 116 aa13.71□□□□□ -0.21
CHD4-213ENST00000545584 MED28Q9H204 178 aa13.71□□□□□ -0.21
CHD4-213ENST00000545584 MDFICQ9P1T7 246 aa13.71□□□□□ -0.21
CHD4-213ENST00000545584 NAGKQ9UJ70 344 aa13.71□□□□□ -0.21
CHD4-213ENST00000545584 TRGV4A0A0C4DH28 118 aa13.7□□□□□ -0.22
CHD4-213ENST00000545584 CRYBA4P53673 196 aa13.7□□□□□ -0.22
CHD4-213ENST00000545584 C8orf49Q96NF6 230 aa13.7□□□□□ -0.22
CHD4-213ENST00000545584 KRTAP1-5Q9BYS1 174 aa13.7□□□□□ -0.22
CHD4-213ENST00000545584 PKD1P98161 4303 aa13.69□□□□□ -0.22
CHD4-213ENST00000545584 SIVA1O15304 175 aa13.69□□□□□ -0.22
CHD4-213ENST00000545584 HMGB3O15347 200 aaKnown RBP13.69□□□□□ -0.22
CHD4-213ENST00000545584 PTTG1O95997 202 aa13.69□□□□□ -0.22
CHD4-213ENST00000545584 CDC34P49427 236 aaPredicted RBP13.69□□□□□ -0.22
CHD4-213ENST00000545584 FHL2Q14192 279 aa13.69□□□□□ -0.22
CHD4-213ENST00000545584 MRPL23Q16540 153 aaKnown RBP13.69□□□□□ -0.22
CHD4-213ENST00000545584 HSD17B11Q8NBQ5 300 aa13.69□□□□□ -0.22
CHD4-213ENST00000545584 TRAV21A0A0B4J279 112 aa13.68□□□□□ -0.22
CHD4-213ENST00000545584 TREM1Q9NP99 234 aa13.68□□□□□ -0.22
CHD4-213ENST00000545584 DNAH11Q96DT5 4516 aa13.67□□□□□ -0.22
CHD4-213ENST00000545584 ARL14EPLP0DKL9 152 aa13.67□□□□□ -0.22
CHD4-213ENST00000545584 TDRG1Q3Y452 100 aa13.67□□□□□ -0.22
CHD4-213ENST00000545584 OR2G3Q8NGZ4 309 aa13.67□□□□□ -0.22
CHD4-213ENST00000545584 PCNPQ8WW12 178 aaKnown RBP13.67□□□□□ -0.22
CHD4-213ENST00000545584 RASL10AQ92737 203 aa13.67□□□□□ -0.22
CHD4-213ENST00000545584 AQP10Q96PS8 301 aa13.67□□□□□ -0.22
CHD4-213ENST00000545584 NDFIP1Q9BT67 221 aa13.67□□□□□ -0.22
CHD4-213ENST00000545584 PSMG3Q9BT73 122 aaPredicted RBP13.67□□□□□ -0.22
CHD4-213ENST00000545584 SERTM2A0A1B0GWG4 89 aa13.66□□□□□ -0.22
CHD4-213ENST00000545584 NXPH4O95158 308 aa13.66□□□□□ -0.22
CHD4-213ENST00000545584 MBP02144 154 aa13.66□□□□□ -0.22
CHD4-213ENST00000545584 STAG3L2P0CL84 134 aa13.66□□□□□ -0.22
CHD4-213ENST00000545584 STAG3L3P0CL85 134 aa13.66□□□□□ -0.22
CHD4-213ENST00000545584 NEGR1Q7Z3B1 354 aa13.66□□□□□ -0.22
CHD4-213ENST00000545584 IQCF2Q8IXL9 164 aa13.66□□□□□ -0.22
CHD4-213ENST00000545584 TRAV8-1A0A0A6YYK1 113 aa13.65□□□□□ -0.22
CHD4-213ENST00000545584 F6UZH7 168 aa13.65□□□□□ -0.22
CHD4-213ENST00000545584 K7EQM0 130 aa13.65□□□□□ -0.22
CHD4-213ENST00000545584 SFTA3P0C7M3 94 aa13.65□□□□□ -0.22
CHD4-213ENST00000545584 ATP6V0CP27449 155 aa13.65□□□□□ -0.22
CHD4-213ENST00000545584 GNG5P63218 68 aa13.65□□□□□ -0.22
CHD4-213ENST00000545584 SPATA12Q7Z6I5 190 aa13.65□□□□□ -0.22
CHD4-213ENST00000545584 ZNF479Q96JC4 524 aa13.65□□□□□ -0.22
CHD4-213ENST00000545584 KCNS1Q96KK3 526 aa13.65□□□□□ -0.22
CHD4-213ENST00000545584 SDF2L1Q9HCN8 221 aa13.65□□□□□ -0.22
CHD4-213ENST00000545584 M0R2P5 195 aa13.64□□□□□ -0.23
CHD4-213ENST00000545584 GNRH2O43555 120 aa13.64□□□□□ -0.23
CHD4-213ENST00000545584 ORM1P02763 201 aa13.64□□□□□ -0.23
CHD4-213ENST00000545584 SRIP30626 198 aa13.64□□□□□ -0.23
CHD4-213ENST00000545584 SERF2P84101 59 aa13.64□□□□□ -0.23
CHD4-213ENST00000545584 LYPD5Q6UWN5 251 aa13.64□□□□□ -0.23
CHD4-213ENST00000545584 C5orf17Q8NAS9 161 aa13.64□□□□□ -0.23
CHD4-213ENST00000545584 ASB13Q8WXK3 278 aa13.64□□□□□ -0.23
CHD4-213ENST00000545584 RAB24Q969Q5 203 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 1216.6 ms