RNA–Protein interactions for RNA: ENST00000544913.2

HMGCS2-204, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 2, humanhuman

TSL 2 BASIC

Gene HMGCS2, Length 1,925 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2-204ENST00000544913 PMCHP20382 165 aa5.33□□□□□ -1.56
HMGCS2-204ENST00000544913 ARL3P36405 182 aa5.33□□□□□ -1.56
HMGCS2-204ENST00000544913 RPS20P60866 119 aaKnown RBP5.33□□□□□ -1.56
HMGCS2-204ENST00000544913 RIGQ13278 110 aa5.33□□□□□ -1.56
HMGCS2-204ENST00000544913 FHL3Q13643 280 aa5.33□□□□□ -1.56
HMGCS2-204ENST00000544913 DEFB136Q30KP8 78 aa5.33□□□□□ -1.56
HMGCS2-204ENST00000544913 PRNTQ86SH4 94 aa5.33□□□□□ -1.56
HMGCS2-204ENST00000544913 MRPL52Q86TS9 123 aaKnown RBP5.33□□□□□ -1.56
HMGCS2-204ENST00000544913 ZNF664Q8N3J9 261 aa5.33□□□□□ -1.56
HMGCS2-204ENST00000544913 WFDC12Q8WWY7 111 aa5.33□□□□□ -1.56
HMGCS2-204ENST00000544913 NDFIP1Q9BT67 221 aa5.33□□□□□ -1.56
HMGCS2-204ENST00000544913 A0A087X0K7 114 aa5.33□□□□□ -1.56
HMGCS2-204ENST00000544913 NUPR1O60356 82 aa5.33□□□□□ -1.56
HMGCS2-204ENST00000544913 ZNF324O75467 553 aaPredicted RBP5.33□□□□□ -1.56
HMGCS2-204ENST00000544913 CA1P00915 261 aaPredicted RBP5.33□□□□□ -1.56
HMGCS2-204ENST00000544913 APOHP02749 345 aaPredicted RBP5.33□□□□□ -1.56
HMGCS2-204ENST00000544913 CDKN1BP46527 198 aa5.33□□□□□ -1.56
HMGCS2-204ENST00000544913 AMTP48728 403 aa5.33□□□□□ -1.56
HMGCS2-204ENST00000544913 KRTAP24-1Q3LI83 254 aa5.33□□□□□ -1.56
HMGCS2-204ENST00000544913 EXOC3-AS1Q8N2X6 119 aa5.33□□□□□ -1.56
HMGCS2-204ENST00000544913 C4orf3Q8WVX3 66 aa5.33□□□□□ -1.56
HMGCS2-204ENST00000544913 CHCHD1Q96BP2 118 aaKnown RBP5.33□□□□□ -1.56
HMGCS2-204ENST00000544913 CITED2Q99967 270 aaPredicted RBP5.33□□□□□ -1.56
HMGCS2-204ENST00000544913 SLC50A1Q9BRV3 221 aa5.33□□□□□ -1.56
HMGCS2-204ENST00000544913 PEF1Q9UBV8 284 aaKnown RBP5.33□□□□□ -1.56
HMGCS2-204ENST00000544913 RNF114Q9Y508 228 aa5.33□□□□□ -1.56
HMGCS2-204ENST00000544913 ANK2Q01484 3957 aa5.32□□□□□ -1.56
HMGCS2-204ENST00000544913 A0A1B0GUT8 65 aa5.32□□□□□ -1.56
HMGCS2-204ENST00000544913 A0A1W2PS18 150 aa5.32□□□□□ -1.56
HMGCS2-204ENST00000544913 ZNF705FA8MVS1 300 aaPredicted RBP5.32□□□□□ -1.56
HMGCS2-204ENST00000544913 NDUFA4O00483 81 aa5.32□□□□□ -1.56
HMGCS2-204ENST00000544913 CHEK1O14757 476 aa5.32□□□□□ -1.56
HMGCS2-204ENST00000544913 HSBP1O75506 76 aa5.32□□□□□ -1.56
HMGCS2-204ENST00000544913 ZNF705DP0CH99 300 aaPredicted RBP5.32□□□□□ -1.56
HMGCS2-204ENST00000544913 ZNF705BP0CI00 300 aaPredicted RBP5.32□□□□□ -1.56
HMGCS2-204ENST00000544913 CDPF1Q6NVV7 123 aa5.32□□□□□ -1.56
HMGCS2-204ENST00000544913 ADAMTSL5Q6ZMM2 481 aa5.32□□□□□ -1.56
HMGCS2-204ENST00000544913 TEX43Q6ZNM6 134 aa5.32□□□□□ -1.56
HMGCS2-204ENST00000544913 C11orf44Q8N8P7 122 aa5.32□□□□□ -1.56
HMGCS2-204ENST00000544913 GATD1Q8NB37 220 aa5.32□□□□□ -1.56
HMGCS2-204ENST00000544913 OR2D3Q8NGH3 330 aa5.32□□□□□ -1.56
HMGCS2-204ENST00000544913 C18orf32Q8TCD1 76 aa5.32□□□□□ -1.56
HMGCS2-204ENST00000544913 ALKBH7Q9BT30 221 aaPredicted RBP5.32□□□□□ -1.56
HMGCS2-204ENST00000544913 NDUFAF3Q9BU61 184 aa5.32□□□□□ -1.56
HMGCS2-204ENST00000544913 TMEM213A2RRL7 107 aa5.31□□□□□ -1.56
HMGCS2-204ENST00000544913 RBAKDNA6NC62 111 aa5.31□□□□□ -1.56
HMGCS2-204ENST00000544913 OR5AL1P0C617 328 aa5.31□□□□□ -1.56
HMGCS2-204ENST00000544913 HOXD3P31249 432 aaPredicted RBP5.31□□□□□ -1.56
HMGCS2-204ENST00000544913 LINC00310P59036 64 aa5.31□□□□□ -1.56
HMGCS2-204ENST00000544913 SLAQ13239 276 aa5.31□□□□□ -1.56
HMGCS2-204ENST00000544913 PMCHL1Q16048 86 aa5.31□□□□□ -1.56
HMGCS2-204ENST00000544913 KIAA1644Q3SXP7 199 aa5.31□□□□□ -1.56
HMGCS2-204ENST00000544913 C8orf86Q6ZUL3 223 aa5.31□□□□□ -1.56
HMGCS2-204ENST00000544913 Q6ZWC4 215 aa5.31□□□□□ -1.56
HMGCS2-204ENST00000544913 GPHB5Q86YW7 130 aa5.31□□□□□ -1.56
HMGCS2-204ENST00000544913 MRPL53Q96EL3 112 aaKnown RBP5.31□□□□□ -1.56
HMGCS2-204ENST00000544913 RAX2Q96IS3 184 aa5.31□□□□□ -1.56
HMGCS2-204ENST00000544913 DUX3Q96PT4 197 aa5.31□□□□□ -1.56
HMGCS2-204ENST00000544913 C20orf144Q9BQM9 153 aa5.31□□□□□ -1.56
HMGCS2-204ENST00000544913 NRN1Q9NPD7 142 aa5.31□□□□□ -1.56
HMGCS2-204ENST00000544913 PKD1L1Q8TDX9 2849 aa5.31□□□□□ -1.56
HMGCS2-204ENST00000544913 KIR2DL5BA0A0G2JN68 375 aa5.31□□□□□ -1.56
HMGCS2-204ENST00000544913 KIR2DL5BA0A0G2JPC4 375 aa5.31□□□□□ -1.56
HMGCS2-204ENST00000544913 ZNF207O43670 478 aaKnown RBP5.31□□□□□ -1.56
HMGCS2-204ENST00000544913 BUB3O43684 328 aa5.31□□□□□ -1.56
HMGCS2-204ENST00000544913 SNRPCP09234 159 aaKnown RBP5.31□□□□□ -1.56
HMGCS2-204ENST00000544913 FRMD6-AS1P0C7T7 363 aa5.31□□□□□ -1.56
HMGCS2-204ENST00000544913 CAMPP49913 170 aa5.31□□□□□ -1.56
HMGCS2-204ENST00000544913 LINC00322Q6ZN03 302 aaPredicted RBP5.31□□□□□ -1.56
HMGCS2-204ENST00000544913 KIR2DL5AQ8N109 375 aa5.31□□□□□ -1.56
HMGCS2-204ENST00000544913 KLHL30-AS1Q8NEE0 82 aa5.31□□□□□ -1.56
HMGCS2-204ENST00000544913 GTSF1Q8WW33 167 aa5.31□□□□□ -1.56
HMGCS2-204ENST00000544913 PGLYRP4Q96LB8 373 aa5.31□□□□□ -1.56
HMGCS2-204ENST00000544913 SGK494Q96LW2 274 aa5.31□□□□□ -1.56
HMGCS2-204ENST00000544913 METTL26Q96S19 204 aa5.31□□□□□ -1.56
HMGCS2-204ENST00000544913 SMAD5-AS1Q9Y6J3 95 aa5.31□□□□□ -1.56
HMGCS2-204ENST00000544913 C20orf202A1L168 122 aa5.3□□□□□ -1.56
HMGCS2-204ENST00000544913 ZNF785A8K8V0 405 aa5.3□□□□□ -1.56
HMGCS2-204ENST00000544913 H3BTX0 84 aa5.3□□□□□ -1.56
HMGCS2-204ENST00000544913 DLEU1O43261 78 aa5.3□□□□□ -1.56
HMGCS2-204ENST00000544913 SLURP1P55000 103 aa5.3□□□□□ -1.56
HMGCS2-204ENST00000544913 ODF1Q14990 250 aa5.3□□□□□ -1.56
HMGCS2-204ENST00000544913 TM4SF20Q53R12 229 aa5.3□□□□□ -1.56
HMGCS2-204ENST00000544913 TCF24Q7RTU0 167 aa5.3□□□□□ -1.56
HMGCS2-204ENST00000544913 GLMPQ8WWB7 406 aa5.3□□□□□ -1.56
HMGCS2-204ENST00000544913 ZC2HC1AQ96GY0 325 aa5.3□□□□□ -1.56
HMGCS2-204ENST00000544913 VAMP8Q9BV40 100 aa5.3□□□□□ -1.56
HMGCS2-204ENST00000544913 PRO1933Q9H354 126 aa5.3□□□□□ -1.56
HMGCS2-204ENST00000544913 NOTCH3Q9UM47 2321 aa5.3□□□□□ -1.56
HMGCS2-204ENST00000544913 IGHV3OR16-13A0A075B7E8 117 aa5.29□□□□□ -1.56
HMGCS2-204ENST00000544913 LOC102724200A0A096LPH7 203 aaPredicted RBP5.29□□□□□ -1.56
HMGCS2-204ENST00000544913 IGHV3-49A0A0A0MS15 119 aa5.29□□□□□ -1.56
HMGCS2-204ENST00000544913 TRAV8-1A0A0A6YYK1 113 aa5.29□□□□□ -1.56
HMGCS2-204ENST00000544913 IGHV3-74A0A0B4J1X5 117 aa5.29□□□□□ -1.56
HMGCS2-204ENST00000544913 A0A1B0GUS0 222 aa5.29□□□□□ -1.56
HMGCS2-204ENST00000544913 TMEM189A5PLL7 270 aa5.29□□□□□ -1.56
HMGCS2-204ENST00000544913 SYNJ2BPP57105 145 aa5.29□□□□□ -1.56
HMGCS2-204ENST00000544913 ZNF493Q6ZR52 646 aa5.29□□□□□ -1.56
HMGCS2-204ENST00000544913 SPATA3Q8NHX4 192 aa5.29□□□□□ -1.56
HMGCS2-204ENST00000544913 PRR25Q96S07 402 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms