RNA–Protein interactions for RNA: ENST00000544778.6

BPTF-208, Transcript of bromodomain PHD finger transcription factor, humanhuman

TSL 5

Gene BPTF, Length 7,573 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BPTF-208ENST00000544778 U3KQE9 123 aa16■□□□□ 0.15
BPTF-208ENST00000544778 IGKV2D-29A0A075B6S2 120 aaPredicted RBP16■□□□□ 0.15
BPTF-208ENST00000544778 A0A0G2JRQ6 117 aa16■□□□□ 0.15
BPTF-208ENST00000544778 IGKV2-29A2NJV5 120 aaPredicted RBP16■□□□□ 0.15
BPTF-208ENST00000544778 C15orf53Q8NAA6 179 aa16■□□□□ 0.15
BPTF-208ENST00000544778 REG4Q9BYZ8 158 aa16■□□□□ 0.15
BPTF-208ENST00000544778 C14orf132Q9NPU4 83 aa15.99■□□□□ 0.15
BPTF-208ENST00000544778 RHOHQ15669 191 aa15.99■□□□□ 0.15
BPTF-208ENST00000544778 BOD1L2Q8IYS8 172 aa15.99■□□□□ 0.15
BPTF-208ENST00000544778 YPEL3P61236 119 aaPredicted RBP15.98■□□□□ 0.15
BPTF-208ENST00000544778 UBE2AP49459 152 aa15.98■□□□□ 0.15
BPTF-208ENST00000544778 CRYBA4P53673 196 aa15.98■□□□□ 0.15
BPTF-208ENST00000544778 CCL18P55774 89 aa15.98■□□□□ 0.15
BPTF-208ENST00000544778 DEFB136Q30KP8 78 aa15.98■□□□□ 0.15
BPTF-208ENST00000544778 A0A0G2JMZ2 1700 aa15.98■□□□□ 0.15
BPTF-208ENST00000544778 LRRC37A2A6NM11 1700 aa15.98■□□□□ 0.15
BPTF-208ENST00000544778 IGLV10-54A0A075B6I4 117 aa15.98■□□□□ 0.15
BPTF-208ENST00000544778 CEND1Q8N111 149 aa15.98■□□□□ 0.15
BPTF-208ENST00000544778 C8orf31Q8N9H6 132 aa15.98■□□□□ 0.15
BPTF-208ENST00000544778 MRPL53Q96EL3 112 aaKnown RBP15.98■□□□□ 0.15
BPTF-208ENST00000544778 PRO1854Q9UHT4 67 aa15.98■□□□□ 0.15
BPTF-208ENST00000544778 CACNA1BQ00975 2339 aa15.97■□□□□ 0.15
BPTF-208ENST00000544778 ANKRD29Q8N6D5 301 aa15.97■□□□□ 0.15
BPTF-208ENST00000544778 ASPHD1Q5U4P2 390 aa15.97■□□□□ 0.15
BPTF-208ENST00000544778 F8W735 103 aaPredicted RBP15.97■□□□□ 0.15
BPTF-208ENST00000544778 IGHG2P01859 326 aa15.97■□□□□ 0.15
BPTF-208ENST00000544778 ZNF407Q9C0G0 2248 aa15.97■□□□□ 0.15
BPTF-208ENST00000544778 COL4A1P02462 1669 aa15.97■□□□□ 0.15
BPTF-208ENST00000544778 TRBV19A0A075B6N1 114 aa15.97■□□□□ 0.15
BPTF-208ENST00000544778 TRBV6-6A0A0A6YYG2 114 aa15.96■□□□□ 0.15
BPTF-208ENST00000544778 FUSP35637 526 aaKnown RBP eCLIP15.96■□□□□ 0.15
BPTF-208ENST00000544778 TMEM14BQ9NUH8 114 aa15.96■□□□□ 0.15
BPTF-208ENST00000544778 ORMDL1Q9P0S3 153 aa15.96■□□□□ 0.15
BPTF-208ENST00000544778 PPDPFLQ8WWR9 84 aa15.96■□□□□ 0.15
BPTF-208ENST00000544778 IGHV7-4-1A0A0J9YVY3 117 aa15.96■□□□□ 0.15
BPTF-208ENST00000544778 NDUFA4L2Q9NRX3 87 aa15.95■□□□□ 0.14
BPTF-208ENST00000544778 CSRP3P50461 194 aa15.95■□□□□ 0.14
BPTF-208ENST00000544778 APRG1Q8IVJ8 170 aa15.95■□□□□ 0.14
BPTF-208ENST00000544778 CAMK2N2Q96S95 79 aa15.95■□□□□ 0.14
BPTF-208ENST00000544778 C9orf47Q6ZRZ4 202 aa15.95■□□□□ 0.14
BPTF-208ENST00000544778 OR11H6Q8NGC7 330 aa15.95■□□□□ 0.14
BPTF-208ENST00000544778 CYYR1Q96J86 154 aa15.95■□□□□ 0.14
BPTF-208ENST00000544778 NDUFB1O75438 58 aa15.95■□□□□ 0.14
BPTF-208ENST00000544778 ZNF833PQ6ZTB9 187 aa15.95■□□□□ 0.14
BPTF-208ENST00000544778 C5orf38Q86SI9 138 aa15.95■□□□□ 0.14
BPTF-208ENST00000544778 B3GALT5-AS1P59052 145 aa15.95■□□□□ 0.14
BPTF-208ENST00000544778 C9orf66Q5T8R8 295 aa15.95■□□□□ 0.14
BPTF-208ENST00000544778 DUX4L9Q6RFH8 374 aaPredicted RBP15.94■□□□□ 0.14
BPTF-208ENST00000544778 NCOR1O75376 2440 aa15.94■□□□□ 0.14
BPTF-208ENST00000544778 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP15.94■□□□□ 0.142e-6■□□□□ 11.1
BPTF-208ENST00000544778 C9orf118A6NHY6 69 aa15.94■□□□□ 0.14
BPTF-208ENST00000544778 ZNF492Q9P255 531 aa15.94■□□□□ 0.14
BPTF-208ENST00000544778 K7ERJ3 54 aa15.94■□□□□ 0.14
BPTF-208ENST00000544778 LMO1P25800 156 aa15.94■□□□□ 0.14
BPTF-208ENST00000544778 ZNF664Q8N3J9 261 aa15.93■□□□□ 0.14
BPTF-208ENST00000544778 KLHDC3Q9BQ90 382 aa15.93■□□□□ 0.14
BPTF-208ENST00000544778 GNRH2O43555 120 aa15.93■□□□□ 0.14
BPTF-208ENST00000544778 Q6ZRM9 215 aa15.93■□□□□ 0.14
BPTF-208ENST00000544778 PIFOQ8TCI5 191 aa15.93■□□□□ 0.14
BPTF-208ENST00000544778 ESM1Q9NQ30 184 aa15.92■□□□□ 0.14
BPTF-208ENST00000544778 A8MWP6 167 aa15.92■□□□□ 0.14
BPTF-208ENST00000544778 SEC61GP60059 68 aa15.92■□□□□ 0.14
BPTF-208ENST00000544778 GYPEP15421 78 aa15.92■□□□□ 0.14
BPTF-208ENST00000544778 PRR25Q96S07 402 aa15.92■□□□□ 0.14
BPTF-208ENST00000544778 ICOSQ9Y6W8 199 aa15.92■□□□□ 0.14
BPTF-208ENST00000544778 MRPL35Q9NZE8 188 aaKnown RBP15.92■□□□□ 0.14
BPTF-208ENST00000544778 TRAV4A0A0B4J268 109 aa15.92■□□□□ 0.14
BPTF-208ENST00000544778 WIPF3A6NGB9 483 aa15.92■□□□□ 0.14
BPTF-208ENST00000544778 BAALC-AS2P0C853 105 aa15.92■□□□□ 0.14
BPTF-208ENST00000544778 TPSG1Q9NRR2 321 aa15.92■□□□□ 0.14
BPTF-208ENST00000544778 H3BRN7 92 aa15.91■□□□□ 0.14
BPTF-208ENST00000544778 ZGRF1Q86YA3 2104 aa15.91■□□□□ 0.14
BPTF-208ENST00000544778 J3QQQ9 107 aa15.91■□□□□ 0.14
BPTF-208ENST00000544778 CACNA1EQ15878 2313 aa15.91■□□□□ 0.14
BPTF-208ENST00000544778 COX7B2Q8TF08 81 aa15.91■□□□□ 0.14
BPTF-208ENST00000544778 F8W1H4 67 aa15.91■□□□□ 0.14
BPTF-208ENST00000544778 C18orf32Q8TCD1 76 aa15.91■□□□□ 0.14
BPTF-208ENST00000544778 Q9H8V8 135 aa15.9■□□□□ 0.14
BPTF-208ENST00000544778 SIGLEC8Q9NYZ4 499 aa15.9■□□□□ 0.14
BPTF-208ENST00000544778 WDR86Q86TI4 376 aa15.9■□□□□ 0.14
BPTF-208ENST00000544778 ARTNQ5T4W7 220 aa15.9■□□□□ 0.14
BPTF-208ENST00000544778 DENND4AQ7Z401 1863 aa15.9■□□□□ 0.14
BPTF-208ENST00000544778 SEM1Q6ZVN7 128 aa15.9■□□□□ 0.14
BPTF-208ENST00000544778 SLC25A29Q8N8R3 303 aa15.9■□□□□ 0.14
BPTF-208ENST00000544778 BVES-AS1Q5T3Y7 98 aa15.89■□□□□ 0.13
BPTF-208ENST00000544778 VOPP1Q96AW1 172 aa15.89■□□□□ 0.13
BPTF-208ENST00000544778 ZC2HC1AQ96GY0 325 aa15.89■□□□□ 0.13
BPTF-208ENST00000544778 IGHV4-59P01825 116 aa15.89■□□□□ 0.13
BPTF-208ENST00000544778 DEFB112Q30KQ8 113 aa15.89■□□□□ 0.13
BPTF-208ENST00000544778 FOXI2Q6ZQN5 318 aa15.89■□□□□ 0.13
BPTF-208ENST00000544778 GREB1LQ9C091 1923 aaPredicted RBP15.89■□□□□ 0.13
BPTF-208ENST00000544778 F6UB75 175 aa15.89■□□□□ 0.13
BPTF-208ENST00000544778 WDR81Q562E7 1941 aa15.89■□□□□ 0.13
BPTF-208ENST00000544778 GP9P14770 177 aa15.89■□□□□ 0.13
BPTF-208ENST00000544778 FANCD2OSQ96PS1 177 aa15.89■□□□□ 0.13
BPTF-208ENST00000544778 MRPL36Q9P0J6 103 aaKnown RBP15.89■□□□□ 0.13
BPTF-208ENST00000544778 SLURP1P55000 103 aa15.88■□□□□ 0.13
BPTF-208ENST00000544778 SPANXA1Q9NS26 97 aa15.88■□□□□ 0.13
BPTF-208ENST00000544778 C17orf58Q2M2W7 97 aa15.88■□□□□ 0.13
BPTF-208ENST00000544778 POLR3KQ9Y2Y1 108 aaPredicted RBP15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms