RNA–Protein interactions for RNA: ENST00000544349.5

VPS33A-209, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 2

Gene VPS33A, Length 2,114 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-209ENST00000544349 TMSB15BA0A087X1C1 80 aa10.93□□□□□ -0.66
VPS33A-209ENST00000544349 IGHV3-49A0A0A0MS15 119 aa10.93□□□□□ -0.66
VPS33A-209ENST00000544349 A0A1B0GUT8 65 aa10.93□□□□□ -0.66
VPS33A-209ENST00000544349 IGLC3P0DOY3 106 aa10.93□□□□□ -0.66
VPS33A-209ENST00000544349 MYOZ3Q8TDC0 251 aa10.93□□□□□ -0.66
VPS33A-209ENST00000544349 TPPP3Q9BW30 176 aa10.93□□□□□ -0.66
VPS33A-209ENST00000544349 TMEM160Q9NX00 188 aa10.93□□□□□ -0.66
VPS33A-209ENST00000544349 AKAP9Q99996 3911 aa10.92□□□□□ -0.66
VPS33A-209ENST00000544349 BTF3P20290 206 aaKnown RBP10.92□□□□□ -0.66
VPS33A-209ENST00000544349 ESM1Q9NQ30 184 aa10.92□□□□□ -0.66
VPS33A-209ENST00000544349 TLN2Q9Y4G6 2542 aa10.92□□□□□ -0.66
VPS33A-209ENST00000544349 SH2D1AO60880 128 aa10.91□□□□□ -0.66
VPS33A-209ENST00000544349 SSTP61278 116 aa10.91□□□□□ -0.66
VPS33A-209ENST00000544349 RNF152Q8N8N0 203 aa10.91□□□□□ -0.66
VPS33A-209ENST00000544349 SMR3AQ99954 134 aa10.91□□□□□ -0.66
VPS33A-209ENST00000544349 TCAPO15273 167 aa10.91□□□□□ -0.66
VPS33A-209ENST00000544349 BATFQ16520 125 aa10.91□□□□□ -0.66
VPS33A-209ENST00000544349 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.91□□□□□ -0.66
VPS33A-209ENST00000544349 VGLL1Q99990 258 aa10.91□□□□□ -0.66
VPS33A-209ENST00000544349 NDFIP1Q9BT67 221 aa10.91□□□□□ -0.66
VPS33A-209ENST00000544349 Q6ZSV7 163 aa10.9□□□□□ -0.66
VPS33A-209ENST00000544349 GATD1Q8NB37 220 aa10.9□□□□□ -0.66
VPS33A-209ENST00000544349 CHCHD1Q96BP2 118 aaKnown RBP10.9□□□□□ -0.66
VPS33A-209ENST00000544349 UBE2E2Q96LR5 201 aa10.9□□□□□ -0.66
VPS33A-209ENST00000544349 TP73-AS1Q9UF72 201 aa10.9□□□□□ -0.66
VPS33A-209ENST00000544349 SONP18583 2426 aaKnown RBP10.9□□□□□ -0.67
VPS33A-209ENST00000544349 MUC21A0A0G2JKD1 596 aa10.9□□□□□ -0.67
VPS33A-209ENST00000544349 MUC21A0A140T8X8 626 aa10.9□□□□□ -0.67
VPS33A-209ENST00000544349 CSN3P07498 182 aa10.9□□□□□ -0.67
VPS33A-209ENST00000544349 CT45A10P0DMU9 189 aa10.9□□□□□ -0.67
VPS33A-209ENST00000544349 ZNF80P51504 273 aaPredicted RBP10.9□□□□□ -0.67
VPS33A-209ENST00000544349 SCGB2A2Q13296 93 aa10.9□□□□□ -0.67
VPS33A-209ENST00000544349 MUC21Q5SSG8 566 aa10.9□□□□□ -0.67
VPS33A-209ENST00000544349 MRPL52Q86TS9 123 aaKnown RBP10.9□□□□□ -0.67
VPS33A-209ENST00000544349 GPHB5Q86YW7 130 aa10.9□□□□□ -0.67
VPS33A-209ENST00000544349 ARL6IP6Q8N6S5 226 aa10.9□□□□□ -0.67
VPS33A-209ENST00000544349 GLMPQ8WWB7 406 aa10.9□□□□□ -0.67
VPS33A-209ENST00000544349 TMEM213A2RRL7 107 aa10.89□□□□□ -0.67
VPS33A-209ENST00000544349 LGALS1P09382 135 aaKnown RBP10.89□□□□□ -0.67
VPS33A-209ENST00000544349 CSN1S1P47710 185 aa10.89□□□□□ -0.67
VPS33A-209ENST00000544349 RIGQ13278 110 aa10.89□□□□□ -0.67
VPS33A-209ENST00000544349 FAM106AQ4KMX7 169 aa10.89□□□□□ -0.67
VPS33A-209ENST00000544349 KLHDC1Q8N7A1 406 aa10.89□□□□□ -0.67
VPS33A-209ENST00000544349 UQCR10Q9UDW1 63 aa10.89□□□□□ -0.67
VPS33A-209ENST00000544349 ACANP16112 2415 aa10.89□□□□□ -0.67
VPS33A-209ENST00000544349 LINC00614P0C842 121 aa10.88□□□□□ -0.67
VPS33A-209ENST00000544349 G0S2P27469 103 aa10.88□□□□□ -0.67
VPS33A-209ENST00000544349 LYZL1Q6UWQ5 148 aa10.88□□□□□ -0.67
VPS33A-209ENST00000544349 PRR25Q96S07 402 aa10.88□□□□□ -0.67
VPS33A-209ENST00000544349 SLC50A1Q9BRV3 221 aa10.88□□□□□ -0.67
VPS33A-209ENST00000544349 TMEM70Q9BUB7 260 aa10.88□□□□□ -0.67
VPS33A-209ENST00000544349 SERTM2A0A1B0GWG4 89 aa10.88□□□□□ -0.67
VPS33A-209ENST00000544349 TMEM189A5PLL7 270 aa10.88□□□□□ -0.67
VPS33A-209ENST00000544349 PRAC2D3DTV9 90 aa10.88□□□□□ -0.67
VPS33A-209ENST00000544349 K7EMT4 169 aa10.88□□□□□ -0.67
VPS33A-209ENST00000544349 LY6G6DO95868 133 aa10.88□□□□□ -0.67
VPS33A-209ENST00000544349 Q6ZN92 141 aa10.88□□□□□ -0.67
VPS33A-209ENST00000544349 RNF182Q8N6D2 247 aa10.88□□□□□ -0.67
VPS33A-209ENST00000544349 DAZ1Q9NQZ3 744 aaKnown RBP10.88□□□□□ -0.67
VPS33A-209ENST00000544349 IGHV7-4-1A0A0J9YVY3 117 aa10.87□□□□□ -0.67
VPS33A-209ENST00000544349 IGLL1P15814 213 aa10.87□□□□□ -0.67
VPS33A-209ENST00000544349 SRD5A1P18405 259 aa10.87□□□□□ -0.67
VPS33A-209ENST00000544349 TM4SF20Q53R12 229 aa10.87□□□□□ -0.67
VPS33A-209ENST00000544349 FAM162BQ5T6X4 162 aa10.87□□□□□ -0.67
VPS33A-209ENST00000544349 TRAV9-2A0A087WT02 112 aa10.87□□□□□ -0.67
VPS33A-209ENST00000544349 SYS1-DBNDD2H3BUS1 97 aa10.87□□□□□ -0.67
VPS33A-209ENST00000544349 LEPROTL1O95214 131 aa10.87□□□□□ -0.67
VPS33A-209ENST00000544349 COX8CQ7Z4L0 72 aa10.87□□□□□ -0.67
VPS33A-209ENST00000544349 ZNF575Q86XF7 245 aa10.87□□□□□ -0.67
VPS33A-209ENST00000544349 MCRIP2Q9BUT9 160 aaKnown RBP10.87□□□□□ -0.67
VPS33A-209ENST00000544349 MYO9AB2RTY4 2548 aa10.86□□□□□ -0.67
VPS33A-209ENST00000544349 RNASE1P07998 156 aaKnown RBP10.86□□□□□ -0.67
VPS33A-209ENST00000544349 TFPI2P48307 235 aa10.86□□□□□ -0.67
VPS33A-209ENST00000544349 HNRNPA3P51991 378 aaKnown RBP10.86□□□□□ -0.67
VPS33A-209ENST00000544349 ERCC8Q13216 396 aa10.86□□□□□ -0.67
VPS33A-209ENST00000544349 Q6AWC8 147 aa10.86□□□□□ -0.67
VPS33A-209ENST00000544349 C8orf86Q6ZUL3 223 aa10.86□□□□□ -0.67
VPS33A-209ENST00000544349 RHPN1-AS1Q9BWJ2 59 aa10.86□□□□□ -0.67
VPS33A-209ENST00000544349 IGHV4OR15-8A0A075B7B6 117 aa10.85□□□□□ -0.67
VPS33A-209ENST00000544349 A0A087WW49 117 aa10.85□□□□□ -0.67
VPS33A-209ENST00000544349 TRAV8-2A0A0B4J237 113 aa10.85□□□□□ -0.67
VPS33A-209ENST00000544349 OR4C46A6NHA9 309 aa10.85□□□□□ -0.67
VPS33A-209ENST00000544349 CRXO43186 299 aaPredicted RBP10.85□□□□□ -0.67
VPS33A-209ENST00000544349 ZNF493Q6ZR52 646 aa10.85□□□□□ -0.67
VPS33A-209ENST00000544349 AMN1Q8IY45 258 aa10.85□□□□□ -0.67
VPS33A-209ENST00000544349 SMPXQ9UHP9 88 aa10.85□□□□□ -0.67
VPS33A-209ENST00000544349 TIMM8BQ9Y5J9 83 aaPredicted RBP10.85□□□□□ -0.67
VPS33A-209ENST00000544349 D6R8Y8 96 aa10.85□□□□□ -0.67
VPS33A-209ENST00000544349 ZNF418Q8TF45 676 aaPredicted RBP10.85□□□□□ -0.67
VPS33A-209ENST00000544349 UFC1Q9Y3C8 167 aa10.85□□□□□ -0.67
VPS33A-209ENST00000544349 A0A1B0GW15 77 aa10.84□□□□□ -0.67
VPS33A-209ENST00000544349 TCTEX1D4Q5JR98 221 aa10.84□□□□□ -0.67
VPS33A-209ENST00000544349 hDV102S1A0JD36 115 aa10.84□□□□□ -0.67
VPS33A-209ENST00000544349 H0Y8G0 127 aa10.84□□□□□ -0.67
VPS33A-209ENST00000544349 ZNF25P17030 456 aaPredicted RBP10.84□□□□□ -0.67
VPS33A-209ENST00000544349 EDN2P20800 178 aa10.84□□□□□ -0.67
VPS33A-209ENST00000544349 TSPOP30536 169 aa10.84□□□□□ -0.67
VPS33A-209ENST00000544349 HILS1P60008 231 aa10.84□□□□□ -0.67
VPS33A-209ENST00000544349 SAPCD1Q5SSQ6 148 aa10.84□□□□□ -0.67
VPS33A-209ENST00000544349 C18orf65Q6ZTR6 163 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms