RNA–Protein interactions for RNA: ENST00000544131.1

CCDC170-203, Transcript of coiled-coil domain containing 170, humanhuman

TSL 4

Gene CCDC170, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC170-203ENST00000544131 OR2H1Q9GZK4 316 aa0.63□□□□□ -2.31
CCDC170-203ENST00000544131 C14orf132Q9NPU4 83 aa0.63□□□□□ -2.31
CCDC170-203ENST00000544131 CDC42SE1Q9NRR8 79 aa0.63□□□□□ -2.31
CCDC170-203ENST00000544131 C19orf12Q9NSK7 152 aa0.63□□□□□ -2.31
CCDC170-203ENST00000544131 CBLN4Q9NTU7 201 aa0.63□□□□□ -2.31
CCDC170-203ENST00000544131 LAMTOR2Q9Y2Q5 125 aa0.63□□□□□ -2.31
CCDC170-203ENST00000544131 CHCHD2Q9Y6H1 151 aaPredicted RBP0.63□□□□□ -2.31
CCDC170-203ENST00000544131 LY96Q9Y6Y9 160 aa0.63□□□□□ -2.31
CCDC170-203ENST00000544131 MYH8P13535 1937 aa0.63□□□□□ -2.31
CCDC170-203ENST00000544131 POLQO75417 2590 aa0.63□□□□□ -2.31
CCDC170-203ENST00000544131 AFDNP55196 1824 aaKnown RBP0.63□□□□□ -2.31
CCDC170-203ENST00000544131 WDR97A6NE52 1622 aa0.63□□□□□ -2.31
CCDC170-203ENST00000544131 RYR3Q15413 4870 aa0.63□□□□□ -2.31
CCDC170-203ENST00000544131 PHRF1Q9P1Y6 1649 aaKnown RBP0.63□□□□□ -2.31
CCDC170-203ENST00000544131 VCANP13611 3396 aa0.63□□□□□ -2.31
CCDC170-203ENST00000544131 EFCAB5A4FU69 1503 aa0.63□□□□□ -2.31
CCDC170-203ENST00000544131 KCPQ6ZWJ8 1503 aa0.63□□□□□ -2.31
CCDC170-203ENST00000544131 PPIP5K1Q6PFW1 1433 aa0.63□□□□□ -2.31
CCDC170-203ENST00000544131 CNTLNQ9NXG0 1405 aa0.63□□□□□ -2.31
CCDC170-203ENST00000544131 MYO9AB2RTY4 2548 aa0.63□□□□□ -2.31
CCDC170-203ENST00000544131 LRRK2Q5S007 2527 aa0.63□□□□□ -2.31
CCDC170-203ENST00000544131 TNRC18O15417 2968 aaPredicted RBP0.63□□□□□ -2.31
CCDC170-203ENST00000544131 ASH1LQ9NR48 2969 aaKnown RBP0.63□□□□□ -2.31
CCDC170-203ENST00000544131 SPTA1P02549 2419 aa0.63□□□□□ -2.31
CCDC170-203ENST00000544131 KIAA0100Q14667 2235 aaKnown RBP0.62□□□□□ -2.31
CCDC170-203ENST00000544131 E9PCH4 1651 aa0.62□□□□□ -2.31
CCDC170-203ENST00000544131 USP54Q70EL1 1684 aa0.62□□□□□ -2.31
CCDC170-203ENST00000544131 ATRQ13535 2644 aa0.62□□□□□ -2.31
CCDC170-203ENST00000544131 UTRNP46939 3433 aa0.62□□□□□ -2.31
CCDC170-203ENST00000544131 ARHGEF10O15013 1369 aa0.62□□□□□ -2.31
CCDC170-203ENST00000544131 CEP152O94986 1710 aa0.62□□□□□ -2.31
CCDC170-203ENST00000544131 POLR1AO95602 1720 aaPredicted RBP0.62□□□□□ -2.31
CCDC170-203ENST00000544131 NUP188Q5SRE5 1749 aa0.62□□□□□ -2.31
CCDC170-203ENST00000544131 LOC107984640A0A0U1RRK4 108 aa0.62□□□□□ -2.31
CCDC170-203ENST00000544131 hDV103S1A0JD37 113 aa0.62□□□□□ -2.31
CCDC170-203ENST00000544131 ZNF736B4DX44 427 aaPredicted RBP0.62□□□□□ -2.31
CCDC170-203ENST00000544131 C5orf58C9J3I9 102 aa0.62□□□□□ -2.31
CCDC170-203ENST00000544131 HCRTO43612 131 aa0.62□□□□□ -2.31
CCDC170-203ENST00000544131 PFDN1O60925 122 aa0.62□□□□□ -2.31
CCDC170-203ENST00000544131 DHFRP00374 187 aa0.62□□□□□ -2.31
CCDC170-203ENST00000544131 ZNF25P17030 456 aaPredicted RBP0.62□□□□□ -2.31
CCDC170-203ENST00000544131 CRYGSP22914 178 aa0.62□□□□□ -2.31
CCDC170-203ENST00000544131 CMPK1P30085 196 aa0.62□□□□□ -2.31
CCDC170-203ENST00000544131 FOXA3P55318 350 aaPredicted RBP0.62□□□□□ -2.31
CCDC170-203ENST00000544131 PRB3Q04118 309 aaPredicted RBP0.62□□□□□ -2.31
CCDC170-203ENST00000544131 PDE6HQ13956 83 aa0.62□□□□□ -2.31
CCDC170-203ENST00000544131 VMA21Q3ZAQ7 101 aa0.62□□□□□ -2.31
CCDC170-203ENST00000544131 C1orf137Q5JT78 98 aa0.62□□□□□ -2.31
CCDC170-203ENST00000544131 TMEM229BQ8NBD8 167 aa0.62□□□□□ -2.31
CCDC170-203ENST00000544131 OR9Q1Q8NGQ5 310 aa0.62□□□□□ -2.31
CCDC170-203ENST00000544131 PYDC1Q8WXC3 89 aa0.62□□□□□ -2.31
CCDC170-203ENST00000544131 HYLS1Q96M11 299 aa0.62□□□□□ -2.31
CCDC170-203ENST00000544131 OBSCN-AS1Q96MR7 158 aa0.62□□□□□ -2.31
CCDC170-203ENST00000544131 PRELID3AQ96N28 172 aa0.62□□□□□ -2.31
CCDC170-203ENST00000544131 NHP2Q9NX24 153 aaKnown RBP0.62□□□□□ -2.31
CCDC170-203ENST00000544131 GSKIPQ9P0R6 139 aa0.62□□□□□ -2.31
CCDC170-203ENST00000544131 KLK9Q9UKQ9 250 aa0.62□□□□□ -2.31
CCDC170-203ENST00000544131 HSPB11Q9Y547 144 aa0.62□□□□□ -2.31
CCDC170-203ENST00000544131 LRRC37A3O60309 1634 aa0.62□□□□□ -2.31
CCDC170-203ENST00000544131 URB2Q14146 1524 aaKnown RBP0.62□□□□□ -2.31
CCDC170-203ENST00000544131 ZMYM4Q5VZL5 1548 aa0.62□□□□□ -2.31
CCDC170-203ENST00000544131 SZT2Q5T011 3432 aa0.62□□□□□ -2.31
CCDC170-203ENST00000544131 SPTBN2O15020 2390 aa0.62□□□□□ -2.31
CCDC170-203ENST00000544131 EEA1Q15075 1411 aa0.62□□□□□ -2.31
CCDC170-203ENST00000544131 ERBINQ96RT1 1412 aa0.62□□□□□ -2.31
CCDC170-203ENST00000544131 RREB1Q92766 1687 aa0.62□□□□□ -2.31
CCDC170-203ENST00000544131 ABCA1O95477 2261 aa0.62□□□□□ -2.31
CCDC170-203ENST00000544131 LAMA2P24043 3122 aaKnown RBP0.62□□□□□ -2.31
CCDC170-203ENST00000544131 CEP170BQ9Y4F5 1589 aaPredicted RBP0.62□□□□□ -2.31
CCDC170-203ENST00000544131 FOCADQ5VW36 1801 aa0.61□□□□□ -2.31
CCDC170-203ENST00000544131 A2ML1A8K2U0 1454 aa0.61□□□□□ -2.31
CCDC170-203ENST00000544131 MLH3Q9UHC1 1453 aa0.61□□□□□ -2.31
CCDC170-203ENST00000544131 MARF1Q9Y4F3 1742 aaKnown RBP0.61□□□□□ -2.31
CCDC170-203ENST00000544131 PREX2Q70Z35 1606 aa0.61□□□□□ -2.31
CCDC170-203ENST00000544131 TRPM1Q7Z4N2 1603 aa0.61□□□□□ -2.31
CCDC170-203ENST00000544131 CASZ1Q86V15 1759 aa0.61□□□□□ -2.31
CCDC170-203ENST00000544131 ABCC3O15438 1527 aa0.61□□□□□ -2.31
CCDC170-203ENST00000544131 ZFYVE16Q7Z3T8 1539 aa0.61□□□□□ -2.31
CCDC170-203ENST00000544131 ABCC2Q92887 1545 aa0.61□□□□□ -2.31
CCDC170-203ENST00000544131 ARHGEF12Q9NZN5 1544 aa0.61□□□□□ -2.31
CCDC170-203ENST00000544131 TRAV27A0A087WT01 109 aa0.61□□□□□ -2.31
CCDC170-203ENST00000544131 TRAV13-1A0A0B4J241 112 aa0.61□□□□□ -2.31
CCDC170-203ENST00000544131 IGHV1-58A0A0C4DH39 117 aa0.61□□□□□ -2.31
CCDC170-203ENST00000544131 H3BMG7 143 aa0.61□□□□□ -2.31
CCDC170-203ENST00000544131 J3KT08 172 aa0.61□□□□□ -2.31
CCDC170-203ENST00000544131 M0R129 80 aa0.61□□□□□ -2.31
CCDC170-203ENST00000544131 DEGS1O15121 323 aa0.61□□□□□ -2.31
CCDC170-203ENST00000544131 CCL16O15467 120 aa0.61□□□□□ -2.31
CCDC170-203ENST00000544131 ERC2-IT1O76042 136 aa0.61□□□□□ -2.31
CCDC170-203ENST00000544131 TCRAP04437 139 aa0.61□□□□□ -2.31
CCDC170-203ENST00000544131 IFNA4P05014 189 aa0.61□□□□□ -2.31
CCDC170-203ENST00000544131 OR10J4P0C629 311 aa0.61□□□□□ -2.31
CCDC170-203ENST00000544131 FABP4P15090 132 aa0.61□□□□□ -2.31
CCDC170-203ENST00000544131 NDUFA6P56556 154 aa0.61□□□□□ -2.31
CCDC170-203ENST00000544131 CKS1BP61024 79 aa0.61□□□□□ -2.31
CCDC170-203ENST00000544131 ALX1Q15699 326 aa0.61□□□□□ -2.31
CCDC170-203ENST00000544131 Q5XG85 94 aa0.61□□□□□ -2.31
CCDC170-203ENST00000544131 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP0.61□□□□□ -2.31
CCDC170-203ENST00000544131 PHF5AQ7RTV0 110 aaKnown RBP0.61□□□□□ -2.31
CCDC170-203ENST00000544131 LRRC18Q8N456 261 aa0.61□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms