RNA–Protein interactions for RNA: ENST00000544079.2

CCT4-204, Transcript of chaperonin containing TCP1 subunit 4, humanhuman

TSL 2 BASIC

Gene CCT4, Length 2,261 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT4-204ENST00000544079 GAGE4Q13068 117 aa14.13□□□□□ -0.15
CCT4-204ENST00000544079 NDUFA11Q86Y39 141 aa14.13□□□□□ -0.15
CCT4-204ENST00000544079 Q8TAT8 98 aa14.13□□□□□ -0.15
CCT4-204ENST00000544079 IGHV4-4A0A075B6R2 117 aa14.12□□□□□ -0.15
CCT4-204ENST00000544079 CD59P13987 128 aa14.12□□□□□ -0.15
CCT4-204ENST00000544079 COX6B1P14854 86 aa14.12□□□□□ -0.15
CCT4-204ENST00000544079 ANKRD29Q8N6D5 301 aa14.12□□□□□ -0.15
CCT4-204ENST00000544079 TOMM6Q96B49 74 aa14.12□□□□□ -0.15
CCT4-204ENST00000544079 PRADC1Q9BSG0 188 aa14.12□□□□□ -0.15
CCT4-204ENST00000544079 ZNF815PA8K554 130 aa14.12□□□□□ -0.15
CCT4-204ENST00000544079 LOXP28300 417 aaPredicted RBP14.12□□□□□ -0.15
CCT4-204ENST00000544079 EFNA4P52798 201 aa14.12□□□□□ -0.15
CCT4-204ENST00000544079 NDUFV3P56181 108 aaKnown RBP14.12□□□□□ -0.15
CCT4-204ENST00000544079 SRSF9Q13242 221 aaKnown RBP eCLIP14.12□□□□□ -0.15
CCT4-204ENST00000544079 IGHV1-3A0A0C4DH29 117 aa14.11□□□□□ -0.15
CCT4-204ENST00000544079 RBAKDNA6NC62 111 aa14.11□□□□□ -0.15
CCT4-204ENST00000544079 IGHG4P01861 327 aa14.11□□□□□ -0.15
CCT4-204ENST00000544079 GAGE2BQ13066 116 aa14.11□□□□□ -0.15
CCT4-204ENST00000544079 GAGE2EQ4V326 116 aa14.11□□□□□ -0.15
CCT4-204ENST00000544079 GAGE2DQ9UEU5 116 aa14.11□□□□□ -0.15
CCT4-204ENST00000544079 A0A1W2PNU3 283 aaPredicted RBP14.11□□□□□ -0.15
CCT4-204ENST00000544079 MBD3L4A6NDZ8 208 aaPredicted RBP14.11□□□□□ -0.15
CCT4-204ENST00000544079 MBD3L3A6NE82 208 aaPredicted RBP14.11□□□□□ -0.15
CCT4-204ENST00000544079 MBD3L5A6NJ08 208 aaPredicted RBP14.11□□□□□ -0.15
CCT4-204ENST00000544079 NUP37Q8NFH4 326 aa14.11□□□□□ -0.15
CCT4-204ENST00000544079 MBD3L2Q8NHZ7 208 aaPredicted RBP14.11□□□□□ -0.15
CCT4-204ENST00000544079 SMIM2Q9BVW6 85 aa14.11□□□□□ -0.15
CCT4-204ENST00000544079 FAM90A27PA6NNH2 459 aa14.1□□□□□ -0.15
CCT4-204ENST00000544079 TCF15Q12870 199 aa14.1□□□□□ -0.15
CCT4-204ENST00000544079 ERCC8Q13216 396 aa14.1□□□□□ -0.15
CCT4-204ENST00000544079 SCGB1D4Q6XE38 83 aa14.1□□□□□ -0.15
CCT4-204ENST00000544079 SCGB3A1Q96QR1 104 aa14.1□□□□□ -0.15
CCT4-204ENST00000544079 FRYQ5TBA9 3013 aa14.1□□□□□ -0.15
CCT4-204ENST00000544079 INTS1Q8N201 2190 aaKnown RBP14.1□□□□□ -0.15
CCT4-204ENST00000544079 CACNA1HO95180 2353 aa14.1□□□□□ -0.15
CCT4-204ENST00000544079 IGLV1-47P01700 117 aa14.1□□□□□ -0.15
CCT4-204ENST00000544079 AJUBAQ96IF1 538 aa14.1□□□□□ -0.15
CCT4-204ENST00000544079 LINC01600Q96MT4 127 aa14.1□□□□□ -0.15
CCT4-204ENST00000544079 KAAG1Q9UBP8 84 aa14.1□□□□□ -0.15
CCT4-204ENST00000544079 TMEM178BH3BS89 294 aa14.09□□□□□ -0.15
CCT4-204ENST00000544079 SCGB1C2P0DMR2 95 aa14.09□□□□□ -0.15
CCT4-204ENST00000544079 MFAP4P55083 255 aa14.09□□□□□ -0.15
CCT4-204ENST00000544079 GFRALQ6UXV0 394 aa14.09□□□□□ -0.15
CCT4-204ENST00000544079 SNCGO76070 127 aa14.08□□□□□ -0.15
CCT4-204ENST00000544079 C10orf126Q8N4M7 172 aa14.08□□□□□ -0.15
CCT4-204ENST00000544079 SLC50A1Q9BRV3 221 aa14.08□□□□□ -0.15
CCT4-204ENST00000544079 SVILO95425 2214 aa14.08□□□□□ -0.16
CCT4-204ENST00000544079 CENPVL3A0A0U1RRI6 287 aa14.08□□□□□ -0.16
CCT4-204ENST00000544079 TRGV3P03979 118 aa14.08□□□□□ -0.16
CCT4-204ENST00000544079 CCL8P80075 99 aa14.08□□□□□ -0.16
CCT4-204ENST00000544079 C17orf100A8MU93 164 aa14.07□□□□□ -0.16
CCT4-204ENST00000544079 LINC01548A6NM66 108 aa14.07□□□□□ -0.16
CCT4-204ENST00000544079 IFITM1P13164 125 aa14.07□□□□□ -0.16
CCT4-204ENST00000544079 SHISA2Q6UWI4 295 aa14.07□□□□□ -0.16
CCT4-204ENST00000544079 IGFBPL1Q8WX77 278 aa14.07□□□□□ -0.16
CCT4-204ENST00000544079 CFHR4Q92496 578 aa14.07□□□□□ -0.16
CCT4-204ENST00000544079 PLEKHB2Q96CS7 222 aa14.07□□□□□ -0.16
CCT4-204ENST00000544079 IGKV3D-20A0A0C4DH25 116 aa14.06□□□□□ -0.16
CCT4-204ENST00000544079 BUB1B-PAK6H3BSN5 160 aa14.06□□□□□ -0.16
CCT4-204ENST00000544079 CNIH1O95406 144 aa14.06□□□□□ -0.16
CCT4-204ENST00000544079 ZNF883P0CG24 379 aa14.06□□□□□ -0.16
CCT4-204ENST00000544079 PAPPA-AS1Q5QFB9 102 aa14.06□□□□□ -0.16
CCT4-204ENST00000544079 LYPD2Q6UXB3 125 aa14.06□□□□□ -0.16
CCT4-204ENST00000544079 KIR2DL4Q99706 377 aa14.06□□□□□ -0.16
CCT4-204ENST00000544079 RPL32P62910 135 aaKnown RBP14.06□□□□□ -0.16
CCT4-204ENST00000544079 TTC32Q5I0X7 151 aa14.06□□□□□ -0.16
CCT4-204ENST00000544079 SEM1Q6ZVN7 128 aa14.06□□□□□ -0.16
CCT4-204ENST00000544079 CTSZQ9UBR2 303 aa14.06□□□□□ -0.16
CCT4-204ENST00000544079 SMAD5-AS1Q9Y6J3 95 aa14.06□□□□□ -0.16
CCT4-204ENST00000544079 IGHV7-4-1A0A0J9YVY3 117 aa14.05□□□□□ -0.16
CCT4-204ENST00000544079 A0A0J9YY99 117 aa14.05□□□□□ -0.16
CCT4-204ENST00000544079 SLC25A20O43772 301 aa14.05□□□□□ -0.16
CCT4-204ENST00000544079 HLA-DMBP28068 263 aa14.05□□□□□ -0.16
CCT4-204ENST00000544079 HERV-K104P63124 156 aa14.05□□□□□ -0.16
CCT4-204ENST00000544079 BAALCQ8WXS3 180 aa14.05□□□□□ -0.16
CCT4-204ENST00000544079 VKORC1Q9BQB6 163 aa14.05□□□□□ -0.16
CCT4-204ENST00000544079 NBEAQ8NFP9 2946 aa14.05□□□□□ -0.16
CCT4-204ENST00000544079 SCGB2A1O75556 95 aa14.04□□□□□ -0.16
CCT4-204ENST00000544079 DYNAPQ8N1N2 210 aa14.04□□□□□ -0.16
CCT4-204ENST00000544079 RASL10AQ92737 203 aa14.04□□□□□ -0.16
CCT4-204ENST00000544079 ZFHX2Q9C0A1 2572 aaPredicted RBP14.04□□□□□ -0.16
CCT4-204ENST00000544079 AHCTF1Q8WYP5 2266 aa14.04□□□□□ -0.16
CCT4-204ENST00000544079 H3BVH4 76 aa14.04□□□□□ -0.16
CCT4-204ENST00000544079 CFC1BP0CG36 223 aa14.04□□□□□ -0.16
CCT4-204ENST00000544079 CFC1P0CG37 223 aa14.04□□□□□ -0.16
CCT4-204ENST00000544079 HERVK_113P61574 105 aa14.04□□□□□ -0.16
CCT4-204ENST00000544079 PRR30Q53SZ7 412 aaPredicted RBP14.04□□□□□ -0.16
CCT4-204ENST00000544079 PRO1854Q9UHT4 67 aa14.04□□□□□ -0.16
CCT4-204ENST00000544079 IGLV11-55A0A075B6I3 123 aa14.03□□□□□ -0.16
CCT4-204ENST00000544079 IGHV3-30P01768 117 aa14.03□□□□□ -0.16
CCT4-204ENST00000544079 IGHV3-30-5P0DP03 117 aa14.03□□□□□ -0.16
CCT4-204ENST00000544079 ATP1A1-AS1Q5TC04 95 aa14.03□□□□□ -0.16
CCT4-204ENST00000544079 SFTA2Q6UW10 78 aa14.03□□□□□ -0.16
CCT4-204ENST00000544079 FRYLO94915 3013 aa14.02□□□□□ -0.16
CCT4-204ENST00000544079 TRAV26-2A0A0B4J265 109 aa14.02□□□□□ -0.16
CCT4-204ENST00000544079 F8W735 103 aaPredicted RBP14.02□□□□□ -0.16
CCT4-204ENST00000544079 IGFL2Q6UWQ7 119 aa14.02□□□□□ -0.16
CCT4-204ENST00000544079 CADP27708 2225 aa14.02□□□□□ -0.17
CCT4-204ENST00000544079 TRAV8-2A0A0B4J237 113 aa14.02□□□□□ -0.17
CCT4-204ENST00000544079 TRAV17A0A0B4J275 112 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms