RNA–Protein interactions for RNA: ENST00000543768.1

SCNN1A-221, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SCNN1A, Length 2,361 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-221ENST00000543768 C12orf54Q6X4T0 127 aa12.32□□□□□ -0.44
SCNN1A-221ENST00000543768 MRPL53Q96EL3 112 aaKnown RBP12.32□□□□□ -0.44
SCNN1A-221ENST00000543768 SPOCK3Q9BQ16 436 aa12.32□□□□□ -0.44
SCNN1A-221ENST00000543768 CELSR2Q9HCU4 2923 aa12.32□□□□□ -0.44
SCNN1A-221ENST00000543768 BRI3O95415 125 aa12.32□□□□□ -0.44
SCNN1A-221ENST00000543768 BLCAPP62952 87 aa12.32□□□□□ -0.44
SCNN1A-221ENST00000543768 LINC01559Q495D7 138 aa12.32□□□□□ -0.44
SCNN1A-221ENST00000543768 SLC25A34Q6PIV7 304 aa12.32□□□□□ -0.44
SCNN1A-221ENST00000543768 Q6ZS46 218 aa12.32□□□□□ -0.44
SCNN1A-221ENST00000543768 PRSS3P2Q8NHM4 247 aa12.32□□□□□ -0.44
SCNN1A-221ENST00000543768 GLMPQ8WWB7 406 aa12.32□□□□□ -0.44
SCNN1A-221ENST00000543768 IFI27P40305 119 aaPredicted RBP12.31□□□□□ -0.44
SCNN1A-221ENST00000543768 TWIST1Q15672 202 aa12.31□□□□□ -0.44
SCNN1A-221ENST00000543768 UNQ9165/PRO28630Q6UXU0 137 aa12.31□□□□□ -0.44
SCNN1A-221ENST00000543768 CNFNQ9BYD5 112 aa12.31□□□□□ -0.44
SCNN1A-221ENST00000543768 HIF1ANQ9NWT6 349 aa12.31□□□□□ -0.44
SCNN1A-221ENST00000543768 FAM106AQ4KMX7 169 aa12.3□□□□□ -0.44
SCNN1A-221ENST00000543768 ORMDL3Q8N138 153 aa12.3□□□□□ -0.44
SCNN1A-221ENST00000543768 NRGNQ92686 78 aa12.3□□□□□ -0.44
SCNN1A-221ENST00000543768 PRELID3AQ96N28 172 aa12.3□□□□□ -0.44
SCNN1A-221ENST00000543768 FA2HQ7L5A8 372 aa12.3□□□□□ -0.44
SCNN1A-221ENST00000543768 KLK15Q9H2R5 256 aa12.3□□□□□ -0.44
SCNN1A-221ENST00000543768 SIGLEC8Q9NYZ4 499 aa12.3□□□□□ -0.44
SCNN1A-221ENST00000543768 MSRB1Q9NZV6 116 aa12.3□□□□□ -0.44
SCNN1A-221ENST00000543768 CRYBG3Q68DQ2 2970 aa12.3□□□□□ -0.44
SCNN1A-221ENST00000543768 H3BUA1 57 aa12.29□□□□□ -0.44
SCNN1A-221ENST00000543768 SMAD7O15105 426 aaKnown RBP12.29□□□□□ -0.44
SCNN1A-221ENST00000543768 CD5LO43866 347 aa12.29□□□□□ -0.44
SCNN1A-221ENST00000543768 C9orf47Q6ZRZ4 202 aa12.29□□□□□ -0.44
SCNN1A-221ENST00000543768 MAP1LC3CQ9BXW4 147 aa12.29□□□□□ -0.44
SCNN1A-221ENST00000543768 C11orf21Q9P2W6 132 aa12.29□□□□□ -0.44
SCNN1A-221ENST00000543768 HSPB8Q9UJY1 196 aa12.29□□□□□ -0.44
SCNN1A-221ENST00000543768 IGKV3D-20A0A0C4DH25 116 aa12.29□□□□□ -0.44
SCNN1A-221ENST00000543768 hDV102S1A0JD36 115 aa12.29□□□□□ -0.44
SCNN1A-221ENST00000543768 GAGE12BA1L429 117 aa12.29□□□□□ -0.44
SCNN1A-221ENST00000543768 B4DSR2 109 aa12.29□□□□□ -0.44
SCNN1A-221ENST00000543768 NDUFA4O00483 81 aa12.29□□□□□ -0.44
SCNN1A-221ENST00000543768 TMEM78Q5T7P6 136 aa12.29□□□□□ -0.44
SCNN1A-221ENST00000543768 USMG5Q96IX5 58 aa12.29□□□□□ -0.44
SCNN1A-221ENST00000543768 TMEM191AQ9H0A3 160 aa12.29□□□□□ -0.44
SCNN1A-221ENST00000543768 MAP1AP78559 2803 aaPredicted RBP12.28□□□□□ -0.44
SCNN1A-221ENST00000543768 A0A096LNJ9 63 aa12.28□□□□□ -0.44
SCNN1A-221ENST00000543768 LOC389332A0A1B0GUA5 103 aa12.28□□□□□ -0.44
SCNN1A-221ENST00000543768 TMEM238C9JI98 176 aa12.28□□□□□ -0.44
SCNN1A-221ENST00000543768 LOXL1Q08397 574 aaPredicted RBP12.28□□□□□ -0.44
SCNN1A-221ENST00000543768 PET117Q6UWS5 81 aa12.28□□□□□ -0.44
SCNN1A-221ENST00000543768 HIST1H1AQ02539 215 aaPredicted RBP12.28□□□□□ -0.44
SCNN1A-221ENST00000543768 GPHB5Q86YW7 130 aa12.28□□□□□ -0.44
SCNN1A-221ENST00000543768 C16orf92Q96LL3 132 aa12.28□□□□□ -0.44
SCNN1A-221ENST00000543768 ZNF747Q9BV97 191 aa12.28□□□□□ -0.44
SCNN1A-221ENST00000543768 HSBP1L1C9JCN9 74 aa12.27□□□□□ -0.44
SCNN1A-221ENST00000543768 SMKR1H3BMG3 65 aa12.27□□□□□ -0.44
SCNN1A-221ENST00000543768 IGHV3-11P01762 117 aa12.27□□□□□ -0.44
SCNN1A-221ENST00000543768 OR10AG1Q8NH19 301 aa12.27□□□□□ -0.44
SCNN1A-221ENST00000543768 RNF185Q96GF1 192 aa12.27□□□□□ -0.44
SCNN1A-221ENST00000543768 C20orf173Q96LM9 149 aa12.27□□□□□ -0.44
SCNN1A-221ENST00000543768 MCRIP2Q9BUT9 160 aaKnown RBP12.27□□□□□ -0.44
SCNN1A-221ENST00000543768 SCRT2Q9NQ03 307 aa12.27□□□□□ -0.44
SCNN1A-221ENST00000543768 PEF1Q9UBV8 284 aaKnown RBP12.27□□□□□ -0.44
SCNN1A-221ENST00000543768 TIMM8BQ9Y5J9 83 aaPredicted RBP12.27□□□□□ -0.44
SCNN1A-221ENST00000543768 UTP20O75691 2785 aaKnown RBP12.27□□□□□ -0.45
SCNN1A-221ENST00000543768 ACACBO00763 2458 aa12.27□□□□□ -0.45
SCNN1A-221ENST00000543768 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.26□□□□□ -0.45
SCNN1A-221ENST00000543768 IGLV1-40P01703 118 aa12.26□□□□□ -0.45
SCNN1A-221ENST00000543768 PF4V1P10720 104 aa12.26□□□□□ -0.45
SCNN1A-221ENST00000543768 CKS2P33552 79 aa12.26□□□□□ -0.45
SCNN1A-221ENST00000543768 LCNL1Q6ZST4 164 aa12.26□□□□□ -0.45
SCNN1A-221ENST00000543768 C9orf139Q6ZV77 190 aa12.26□□□□□ -0.45
SCNN1A-221ENST00000543768 CHTOPQ9Y3Y2 248 aaKnown RBP12.26□□□□□ -0.45
SCNN1A-221ENST00000543768 TRAV8-6A0A0B4J262 113 aa12.26□□□□□ -0.45
SCNN1A-221ENST00000543768 NPYP01303 97 aa12.26□□□□□ -0.45
SCNN1A-221ENST00000543768 DSCR9P59020 149 aa12.26□□□□□ -0.45
SCNN1A-221ENST00000543768 CSMD2Q7Z408 3487 aa12.25□□□□□ -0.45
SCNN1A-221ENST00000543768 LINC01545Q5VT33 79 aa12.25□□□□□ -0.45
SCNN1A-221ENST00000543768 Q6ZQT7 251 aa12.25□□□□□ -0.45
SCNN1A-221ENST00000543768 OR4X2Q8NGF9 303 aa12.25□□□□□ -0.45
SCNN1A-221ENST00000543768 H0Y8G0 127 aa12.25□□□□□ -0.45
SCNN1A-221ENST00000543768 SOCS3O14543 225 aa12.25□□□□□ -0.45
SCNN1A-221ENST00000543768 NCR2O95944 276 aa12.25□□□□□ -0.45
SCNN1A-221ENST00000543768 CFHR3Q02985 330 aa12.25□□□□□ -0.45
SCNN1A-221ENST00000543768 MS4A6AQ9H2W1 248 aa12.25□□□□□ -0.45
SCNN1A-221ENST00000543768 PRB1P04280 392 aa12.24□□□□□ -0.45
SCNN1A-221ENST00000543768 GATA3P23771 443 aa12.24□□□□□ -0.45
SCNN1A-221ENST00000543768 FOXE3Q13461 319 aa12.24□□□□□ -0.45
SCNN1A-221ENST00000543768 PRSS57Q6UWY2 283 aa12.24□□□□□ -0.45
SCNN1A-221ENST00000543768 GAS8-AS1O95177 125 aa12.23□□□□□ -0.45
SCNN1A-221ENST00000543768 NPFFR1Q9GZQ6 430 aa12.23□□□□□ -0.45
SCNN1A-221ENST00000543768 A0A096LNT2 108 aa12.23□□□□□ -0.45
SCNN1A-221ENST00000543768 IGHV7-4-1A0A0J9YVY3 117 aa12.23□□□□□ -0.45
SCNN1A-221ENST00000543768 PRR9Q5T870 116 aa12.23□□□□□ -0.45
SCNN1A-221ENST00000543768 CSPG4Q6UVK1 2322 aa12.23□□□□□ -0.45
SCNN1A-221ENST00000543768 SLC25A16P16260 332 aa12.22□□□□□ -0.45
SCNN1A-221ENST00000543768 PMCHL2Q9BQD1 86 aa12.22□□□□□ -0.45
SCNN1A-221ENST00000543768 LENEPQ9Y5L5 61 aa12.22□□□□□ -0.45
SCNN1A-221ENST00000543768 A0A0G2JLM5 398 aa12.22□□□□□ -0.45
SCNN1A-221ENST00000543768 CIDEAO60543 219 aa12.22□□□□□ -0.45
SCNN1A-221ENST00000543768 SAP30O75446 220 aa12.22□□□□□ -0.45
SCNN1A-221ENST00000543768 FXYD7P58549 80 aa12.21□□□□□ -0.45
SCNN1A-221ENST00000543768 C7orf71A4D174 169 aa12.21□□□□□ -0.46
SCNN1A-221ENST00000543768 GAGE10A6NGK3 116 aa12.21□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms