RNA–Protein interactions for RNA: ENST00000543542.1

LTBR-212, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 367 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-212ENST00000543542 VAX2Q9UIW0 290 aa4.58□□□□□ -1.68
LTBR-212ENST00000543542 NAGKQ9UJ70 344 aa4.58□□□□□ -1.68
LTBR-212ENST00000543542 X6R8D5 127 aa4.58□□□□□ -1.68
LTBR-212ENST00000543542 TRAV21A0A0B4J279 112 aa4.57□□□□□ -1.68
LTBR-212ENST00000543542 TRBV7-9A0A0J9YWB2 115 aa4.57□□□□□ -1.68
LTBR-212ENST00000543542 TMEM189A5PLL7 270 aa4.57□□□□□ -1.68
LTBR-212ENST00000543542 CXorf65A6NEN9 183 aa4.57□□□□□ -1.68
LTBR-212ENST00000543542 RBFOX3A6NFN3 312 aa4.57□□□□□ -1.68
LTBR-212ENST00000543542 SNURFLB1AK76 121 aa4.57□□□□□ -1.68
LTBR-212ENST00000543542 KLLNB2CW77 178 aa4.57□□□□□ -1.68
LTBR-212ENST00000543542 PDE6DO43924 150 aa4.57□□□□□ -1.68
LTBR-212ENST00000543542 GCGP01275 180 aa4.57□□□□□ -1.68
LTBR-212ENST00000543542 PRM2P04554 102 aa4.57□□□□□ -1.68
LTBR-212ENST00000543542 S100A9P06702 114 aaKnown RBP4.57□□□□□ -1.68
LTBR-212ENST00000543542 RBMY1A1P0DJD3 496 aaKnown RBP4.57□□□□□ -1.68
LTBR-212ENST00000543542 RBMY1CP0DJD4 496 aa4.57□□□□□ -1.68
LTBR-212ENST00000543542 BCL2P10415 239 aa4.57□□□□□ -1.68
LTBR-212ENST00000543542 CEBPGP53567 150 aa4.57□□□□□ -1.68
LTBR-212ENST00000543542 TAS2R60P59551 318 aa4.57□□□□□ -1.68
LTBR-212ENST00000543542 RBMY1FQ15415 496 aaKnown RBP4.57□□□□□ -1.68
LTBR-212ENST00000543542 TOR2AQ5JU69 321 aa4.57□□□□□ -1.68
LTBR-212ENST00000543542 MUC21Q5SSG8 566 aa4.57□□□□□ -1.68
LTBR-212ENST00000543542 Q86TA4 180 aa4.57□□□□□ -1.68
LTBR-212ENST00000543542 EIF4E3Q8N5X7 224 aaKnown RBP4.57□□□□□ -1.68
LTBR-212ENST00000543542 ZFAND2AQ8N6M9 145 aa4.57□□□□□ -1.68
LTBR-212ENST00000543542 IL17DQ8TAD2 202 aa4.57□□□□□ -1.68
LTBR-212ENST00000543542 C11orf45Q8TAV5 145 aa4.57□□□□□ -1.68
LTBR-212ENST00000543542 C16orf74Q96GX8 76 aa4.57□□□□□ -1.68
LTBR-212ENST00000543542 FAM19A4Q96LR4 140 aa4.57□□□□□ -1.68
LTBR-212ENST00000543542 C8orf49Q96NF6 230 aa4.57□□□□□ -1.68
LTBR-212ENST00000543542 NEU1Q99519 415 aa4.57□□□□□ -1.68
LTBR-212ENST00000543542 PYGO2Q9BRQ0 406 aa4.57□□□□□ -1.68
LTBR-212ENST00000543542 C11orf68Q9H3H3 251 aaKnown RBP4.57□□□□□ -1.68
LTBR-212ENST00000543542 HUWE1Q7Z6Z7 4374 aaKnown RBP4.57□□□□□ -1.68
LTBR-212ENST00000543542 NBEAL2Q6ZNJ1 2754 aa4.56□□□□□ -1.68
LTBR-212ENST00000543542 IGHV1OR15-1A0A075B7D0 117 aa4.56□□□□□ -1.68
LTBR-212ENST00000543542 SPART-AS1P0CW21 52 aa4.56□□□□□ -1.68
LTBR-212ENST00000543542 PMS2P11Q13670 270 aa4.56□□□□□ -1.68
LTBR-212ENST00000543542 TMEM183BQ1AE95 376 aa4.56□□□□□ -1.68
LTBR-212ENST00000543542 ZNF674Q2M3X9 581 aa4.56□□□□□ -1.68
LTBR-212ENST00000543542 PRR9Q5T870 116 aa4.56□□□□□ -1.68
LTBR-212ENST00000543542 ZNF493Q6ZR52 646 aa4.56□□□□□ -1.68
LTBR-212ENST00000543542 BAGE2Q86Y30 109 aa4.56□□□□□ -1.68
LTBR-212ENST00000543542 Q8NAQ8 132 aa4.56□□□□□ -1.68
LTBR-212ENST00000543542 NHLRC2Q8NBF2 726 aa4.56□□□□□ -1.68
LTBR-212ENST00000543542 ZFP30Q9Y2G7 519 aa4.56□□□□□ -1.68
LTBR-212ENST00000543542 TRGV11A0A075B6L2 103 aa4.55□□□□□ -1.68
LTBR-212ENST00000543542 TEX48A0A1B0GUV7 120 aa4.55□□□□□ -1.68
LTBR-212ENST00000543542 FABP5P3A8MUU1 101 aa4.55□□□□□ -1.68
LTBR-212ENST00000543542 ZNF324O75467 553 aaPredicted RBP4.55□□□□□ -1.68
LTBR-212ENST00000543542 IGLV2-11P01706 119 aa4.55□□□□□ -1.68
LTBR-212ENST00000543542 MGST1P10620 155 aaKnown RBP4.55□□□□□ -1.68
LTBR-212ENST00000543542 AZU1P20160 251 aa4.55□□□□□ -1.68
LTBR-212ENST00000543542 RPL35P42766 123 aaKnown RBP4.55□□□□□ -1.68
LTBR-212ENST00000543542 GNG4P50150 75 aa4.55□□□□□ -1.68
LTBR-212ENST00000543542 NANOS2P60321 138 aaKnown RBP4.55□□□□□ -1.68
LTBR-212ENST00000543542 ZNF415Q09FC8 603 aa4.55□□□□□ -1.68
LTBR-212ENST00000543542 ZNF506Q5JVG8 444 aa4.55□□□□□ -1.68
LTBR-212ENST00000543542 FAM222AQ5U5X8 452 aa4.55□□□□□ -1.68
LTBR-212ENST00000543542 Q6AWC8 147 aa4.55□□□□□ -1.68
LTBR-212ENST00000543542 ZFAND6Q6FIF0 208 aa4.55□□□□□ -1.68
LTBR-212ENST00000543542 PRR27Q6MZM9 219 aa4.55□□□□□ -1.68
LTBR-212ENST00000543542 ZNF767PQ75MW2 155 aa4.55□□□□□ -1.68
LTBR-212ENST00000543542 TMEM183AQ8IXX5 376 aa4.55□□□□□ -1.68
LTBR-212ENST00000543542 C2CD4CQ8TF44 421 aa4.55□□□□□ -1.68
LTBR-212ENST00000543542 TMEM263Q8WUH6 116 aaKnown RBP4.55□□□□□ -1.68
LTBR-212ENST00000543542 TVP23CQ96ET8 276 aa4.55□□□□□ -1.68
LTBR-212ENST00000543542 KCNS1Q96KK3 526 aa4.55□□□□□ -1.68
LTBR-212ENST00000543542 EDA2RQ9HAV5 297 aa4.55□□□□□ -1.68
LTBR-212ENST00000543542 SDF2L1Q9HCN8 221 aa4.55□□□□□ -1.68
LTBR-212ENST00000543542 TIMM8BQ9Y5J9 83 aaPredicted RBP4.55□□□□□ -1.68
LTBR-212ENST00000543542 TGP01266 2768 aa4.55□□□□□ -1.68
LTBR-212ENST00000543542 TRBV6-1A0A0K0K1D8 114 aa4.54□□□□□ -1.68
LTBR-212ENST00000543542 RAB19A4D1S5 217 aa4.54□□□□□ -1.68
LTBR-212ENST00000543542 LTAP01374 205 aa4.54□□□□□ -1.68
LTBR-212ENST00000543542 ORM1P02763 201 aa4.54□□□□□ -1.68
LTBR-212ENST00000543542 PFN1P07737 140 aaKnown RBP4.54□□□□□ -1.68
LTBR-212ENST00000543542 DEFB130BP0DP73 79 aa4.54□□□□□ -1.68
LTBR-212ENST00000543542 DEFB130AP0DP74 79 aa4.54□□□□□ -1.68
LTBR-212ENST00000543542 HTN3P15516 51 aa4.54□□□□□ -1.68
LTBR-212ENST00000543542 S100A4P26447 101 aaKnown RBP4.54□□□□□ -1.68
LTBR-212ENST00000543542 ZNF80P51504 273 aaPredicted RBP4.54□□□□□ -1.68
LTBR-212ENST00000543542 DAD1P61803 113 aa4.54□□□□□ -1.68
LTBR-212ENST00000543542 OR5I1Q13606 314 aa4.54□□□□□ -1.68
LTBR-212ENST00000543542 PEA15Q15121 130 aa4.54□□□□□ -1.68
LTBR-212ENST00000543542 ANXA2RQ3ZCQ2 193 aa4.54□□□□□ -1.68
LTBR-212ENST00000543542 CENPWQ5EE01 88 aa4.54□□□□□ -1.68
LTBR-212ENST00000543542 FAM162BQ5T6X4 162 aa4.54□□□□□ -1.68
LTBR-212ENST00000543542 Q6ZQT7 251 aa4.54□□□□□ -1.68
LTBR-212ENST00000543542 LYPD6BQ8NI32 183 aa4.54□□□□□ -1.68
LTBR-212ENST00000543542 MUC7Q8TAX7 377 aa4.54□□□□□ -1.68
LTBR-212ENST00000543542 C11orf52Q96A22 123 aa4.54□□□□□ -1.68
LTBR-212ENST00000543542 DAZAP1Q96EP5 407 aaKnown RBP4.54□□□□□ -1.68
LTBR-212ENST00000543542 ZC2HC1AQ96GY0 325 aa4.54□□□□□ -1.68
LTBR-212ENST00000543542 FAM210AQ96ND0 272 aa4.54□□□□□ -1.68
LTBR-212ENST00000543542 DERL1Q9BUN8 251 aa4.54□□□□□ -1.68
LTBR-212ENST00000543542 NOP10Q9NPE3 64 aaKnown RBP4.54□□□□□ -1.68
LTBR-212ENST00000543542 TP53TG3Q9ULZ0 132 aa4.54□□□□□ -1.68
LTBR-212ENST00000543542 CELA1Q9UNI1 258 aa4.54□□□□□ -1.68
LTBR-212ENST00000543542 KLF12Q9Y4X4 402 aa4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms