RNA–Protein interactions for RNA: ENST00000543462.1

VEGFB-204, Transcript of vascular endothelial growth factor B, humanhuman

TSL 2

Gene VEGFB, Length 663 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFB-204ENST00000543462 DNAH1Q9P2D7 4330 aa7.08□□□□□ -1.28
VEGFB-204ENST00000543462 IGHV3OR16-12A0A075B7B8 117 aa7.08□□□□□ -1.28
VEGFB-204ENST00000543462 TRAV12-3A0A0B4J271 114 aa7.08□□□□□ -1.28
VEGFB-204ENST00000543462 TRBV6-1A0A0K0K1D8 114 aa7.08□□□□□ -1.28
VEGFB-204ENST00000543462 LOC102723971A0A1B0GUV8 181 aa7.08□□□□□ -1.28
VEGFB-204ENST00000543462 TMEM189A5PLL7 270 aa7.08□□□□□ -1.28
VEGFB-204ENST00000543462 FBLL1A6NHQ2 334 aaKnown RBP7.08□□□□□ -1.28
VEGFB-204ENST00000543462 ZNF705GA8MUZ8 300 aaPredicted RBP7.08□□□□□ -1.28
VEGFB-204ENST00000543462 C3orf84H3BNL1 204 aa7.08□□□□□ -1.28
VEGFB-204ENST00000543462 HBE1P02100 147 aa7.08□□□□□ -1.28
VEGFB-204ENST00000543462 AZU1P20160 251 aa7.08□□□□□ -1.28
VEGFB-204ENST00000543462 RRN3P1Q2M238 152 aa7.08□□□□□ -1.28
VEGFB-204ENST00000543462 LINC00612Q8N6U2 182 aa7.08□□□□□ -1.28
VEGFB-204ENST00000543462 C11orf72Q8NBR9 251 aa7.08□□□□□ -1.28
VEGFB-204ENST00000543462 C11orf52Q96A22 123 aa7.08□□□□□ -1.28
VEGFB-204ENST00000543462 LINC00479Q96M42 142 aa7.08□□□□□ -1.28
VEGFB-204ENST00000543462 PYGO2Q9BRQ0 406 aa7.08□□□□□ -1.28
VEGFB-204ENST00000543462 MANBALQ9NQG1 85 aa7.08□□□□□ -1.28
VEGFB-204ENST00000543462 DKK2Q9UBU2 259 aa7.08□□□□□ -1.28
VEGFB-204ENST00000543462 RPH3ALQ9UNE2 315 aa7.08□□□□□ -1.28
VEGFB-204ENST00000543462 LYSTQ99698 3801 aa7.08□□□□□ -1.28
VEGFB-204ENST00000543462 ALMS1Q8TCU4 4167 aa7.07□□□□□ -1.28
VEGFB-204ENST00000543462 A0A1B0GV50 99 aa7.07□□□□□ -1.28
VEGFB-204ENST00000543462 PPT1P50897 306 aa7.07□□□□□ -1.28
VEGFB-204ENST00000543462 FLI1Q01543 452 aaPredicted RBP7.07□□□□□ -1.28
VEGFB-204ENST00000543462 C12orf74Q32Q52 190 aa7.07□□□□□ -1.28
VEGFB-204ENST00000543462 TDRG1Q3Y452 100 aa7.07□□□□□ -1.28
VEGFB-204ENST00000543462 ANXA2RQ3ZCQ2 193 aa7.07□□□□□ -1.28
VEGFB-204ENST00000543462 CASC10Q5T4H9 136 aa7.07□□□□□ -1.28
VEGFB-204ENST00000543462 ZNF493Q6ZR52 646 aa7.07□□□□□ -1.28
VEGFB-204ENST00000543462 ZNF680Q8NEM1 530 aa7.07□□□□□ -1.28
VEGFB-204ENST00000543462 TMEM263Q8WUH6 116 aaKnown RBP7.07□□□□□ -1.28
VEGFB-204ENST00000543462 PSG8Q9UQ74 426 aa7.07□□□□□ -1.28
VEGFB-204ENST00000543462 MUC4Q99102 2169 aa7.06□□□□□ -1.28
VEGFB-204ENST00000543462 SACSQ9NZJ4 4579 aa7.06□□□□□ -1.28
VEGFB-204ENST00000543462 TRAV34A0A0B4J273 112 aa7.06□□□□□ -1.28
VEGFB-204ENST00000543462 SCO2A0A1W2PP80 73 aa7.06□□□□□ -1.28
VEGFB-204ENST00000543462 F6UZH7 168 aa7.06□□□□□ -1.28
VEGFB-204ENST00000543462 J3KRW8 73 aa7.06□□□□□ -1.28
VEGFB-204ENST00000543462 GPX1P07203 203 aa7.06□□□□□ -1.28
VEGFB-204ENST00000543462 ZNF80P51504 273 aaPredicted RBP7.06□□□□□ -1.28
VEGFB-204ENST00000543462 NANOS2P60321 138 aaKnown RBP7.06□□□□□ -1.28
VEGFB-204ENST00000543462 C16orf74Q96GX8 76 aa7.06□□□□□ -1.28
VEGFB-204ENST00000543462 SGK494Q96LW2 274 aa7.06□□□□□ -1.28
VEGFB-204ENST00000543462 C8orf49Q96NF6 230 aa7.06□□□□□ -1.28
VEGFB-204ENST00000543462 LINC01587Q99440 93 aa7.06□□□□□ -1.28
VEGFB-204ENST00000543462 NIPSNAP3BQ9BS92 247 aa7.06□□□□□ -1.28
VEGFB-204ENST00000543462 TMEM208Q9BTX3 173 aa7.06□□□□□ -1.28
VEGFB-204ENST00000543462 C11orf94C9JXX5 98 aa7.05□□□□□ -1.28
VEGFB-204ENST00000543462 K7EQM0 130 aa7.05□□□□□ -1.28
VEGFB-204ENST00000543462 LTAP01374 205 aa7.05□□□□□ -1.28
VEGFB-204ENST00000543462 BCL2P10415 239 aa7.05□□□□□ -1.28
VEGFB-204ENST00000543462 RNASE4P34096 147 aaKnown RBP7.05□□□□□ -1.28
VEGFB-204ENST00000543462 TMEM183BQ1AE95 376 aa7.05□□□□□ -1.28
VEGFB-204ENST00000543462 CLLU1Q5K131 121 aa7.05□□□□□ -1.28
VEGFB-204ENST00000543462 FAM222AQ5U5X8 452 aa7.05□□□□□ -1.28
VEGFB-204ENST00000543462 CST9LP1Q5W188 147 aa7.05□□□□□ -1.28
VEGFB-204ENST00000543462 C11orf45Q8TAV5 145 aa7.05□□□□□ -1.28
VEGFB-204ENST00000543462 FMC1Q96HJ9 113 aa7.05□□□□□ -1.28
VEGFB-204ENST00000543462 TREM1Q9NP99 234 aa7.05□□□□□ -1.28
VEGFB-204ENST00000543462 GNG13Q9P2W3 67 aa7.05□□□□□ -1.28
VEGFB-204ENST00000543462 C11orf21Q9P2W6 132 aa7.05□□□□□ -1.28
VEGFB-204ENST00000543462 TP53TG3Q9ULZ0 132 aa7.05□□□□□ -1.28
VEGFB-204ENST00000543462 IGHV1OR15-1A0A075B7D0 117 aa7.04□□□□□ -1.28
VEGFB-204ENST00000543462 TEX48A0A1B0GUV7 120 aa7.04□□□□□ -1.28
VEGFB-204ENST00000543462 LINC00862A6NCI5 91 aa7.04□□□□□ -1.28
VEGFB-204ENST00000543462 LYRM9A8MSI8 78 aa7.04□□□□□ -1.28
VEGFB-204ENST00000543462 TCL1AP56279 114 aa7.04□□□□□ -1.28
VEGFB-204ENST00000543462 RAB14P61106 215 aa7.04□□□□□ -1.28
VEGFB-204ENST00000543462 MEF2BQ02080 365 aaPredicted RBP7.04□□□□□ -1.28
VEGFB-204ENST00000543462 DAZ2Q13117 558 aaKnown RBP7.04□□□□□ -1.28
VEGFB-204ENST00000543462 IBA57Q5T440 356 aaKnown RBP7.04□□□□□ -1.28
VEGFB-204ENST00000543462 Q6ZTC4 211 aa7.04□□□□□ -1.28
VEGFB-204ENST00000543462 EIF4E3Q8N5X7 224 aaKnown RBP7.04□□□□□ -1.28
VEGFB-204ENST00000543462 TXNDC17Q9BRA2 123 aa7.04□□□□□ -1.28
VEGFB-204ENST00000543462 MLST8Q9BVC4 326 aa7.04□□□□□ -1.28
VEGFB-204ENST00000543462 MED9Q9NWA0 146 aa7.04□□□□□ -1.28
VEGFB-204ENST00000543462 TRAV21A0A0B4J279 112 aa7.03□□□□□ -1.28
VEGFB-204ENST00000543462 TEX46H3BTG2 121 aa7.03□□□□□ -1.28
VEGFB-204ENST00000543462 GCGP01275 180 aa7.03□□□□□ -1.28
VEGFB-204ENST00000543462 PFN1P07737 140 aaKnown RBP7.03□□□□□ -1.28
VEGFB-204ENST00000543462 SPART-AS1P0CW21 52 aa7.03□□□□□ -1.28
VEGFB-204ENST00000543462 AKR1C3P42330 323 aa7.03□□□□□ -1.28
VEGFB-204ENST00000543462 CRIP1P50238 77 aa7.03□□□□□ -1.28
VEGFB-204ENST00000543462 BLOC1S1P78537 153 aa7.03□□□□□ -1.28
VEGFB-204ENST00000543462 SAPCD1Q5SSQ6 148 aa7.03□□□□□ -1.28
VEGFB-204ENST00000543462 ZFAND6Q6FIF0 208 aa7.03□□□□□ -1.28
VEGFB-204ENST00000543462 PRNTQ86SH4 94 aa7.03□□□□□ -1.28
VEGFB-204ENST00000543462 ZNF575Q86XF7 245 aa7.03□□□□□ -1.28
VEGFB-204ENST00000543462 PHLDA1Q8WV24 401 aaPredicted RBP7.03□□□□□ -1.28
VEGFB-204ENST00000543462 ZC2HC1AQ96GY0 325 aa7.03□□□□□ -1.28
VEGFB-204ENST00000543462 NDFIP1Q9BT67 221 aa7.03□□□□□ -1.28
VEGFB-204ENST00000543462 DERL1Q9BUN8 251 aa7.03□□□□□ -1.28
VEGFB-204ENST00000543462 VPS13DQ5THJ4 4388 aa7.03□□□□□ -1.28
VEGFB-204ENST00000543462 TRBV20OR9-2A0A075B6H5 130 aa7.02□□□□□ -1.29
VEGFB-204ENST00000543462 CXorf65A6NEN9 183 aa7.02□□□□□ -1.29
VEGFB-204ENST00000543462 NUPR2A6NF83 97 aa7.02□□□□□ -1.29
VEGFB-204ENST00000543462 NDUFS6O75380 124 aaKnown RBP7.02□□□□□ -1.29
VEGFB-204ENST00000543462 TAGLN2P37802 199 aaKnown RBP7.02□□□□□ -1.29
VEGFB-204ENST00000543462 EMP1P54849 157 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms