RNA–Protein interactions for RNA: ENST00000543359.5

TNFRSF1A-215, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 3

Gene TNFRSF1A, Length 627 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-215ENST00000543359 IBA57Q5T440 356 aaKnown RBP9.09□□□□□ -0.95
TNFRSF1A-215ENST00000543359 LCE2DQ5TA82 110 aaPredicted RBP9.09□□□□□ -0.95
TNFRSF1A-215ENST00000543359 GNPNAT1Q96EK6 184 aaPredicted RBP9.09□□□□□ -0.95
TNFRSF1A-215ENST00000543359 VSIG2Q96IQ7 327 aa9.09□□□□□ -0.95
TNFRSF1A-215ENST00000543359 AQP10Q96PS8 301 aa9.09□□□□□ -0.95
TNFRSF1A-215ENST00000543359 ATG101Q9BSB4 218 aa9.09□□□□□ -0.95
TNFRSF1A-215ENST00000543359 OTORQ9NRC9 128 aa9.09□□□□□ -0.95
TNFRSF1A-215ENST00000543359 CSN1S1P47710 185 aa9.08□□□□□ -0.96
TNFRSF1A-215ENST00000543359 CCL18P55774 89 aa9.08□□□□□ -0.96
TNFRSF1A-215ENST00000543359 ESRGQ1W209 222 aa9.08□□□□□ -0.96
TNFRSF1A-215ENST00000543359 ACOT6Q3I5F7 207 aaPredicted RBP9.08□□□□□ -0.96
TNFRSF1A-215ENST00000543359 SSX7Q7RTT5 188 aa9.08□□□□□ -0.96
TNFRSF1A-215ENST00000543359 OR2G3Q8NGZ4 309 aa9.08□□□□□ -0.96
TNFRSF1A-215ENST00000543359 TMED6Q8WW62 240 aa9.08□□□□□ -0.96
TNFRSF1A-215ENST00000543359 MED28Q9H204 178 aa9.08□□□□□ -0.96
TNFRSF1A-215ENST00000543359 LENEPQ9Y5L5 61 aa9.08□□□□□ -0.96
TNFRSF1A-215ENST00000543359 TRGV1A0A0A0MS02 117 aa9.07□□□□□ -0.96
TNFRSF1A-215ENST00000543359 PGPA6NDG6 321 aa9.07□□□□□ -0.96
TNFRSF1A-215ENST00000543359 RGS13O14921 159 aa9.07□□□□□ -0.96
TNFRSF1A-215ENST00000543359 C1orf134Q5TEV5 83 aa9.07□□□□□ -0.96
TNFRSF1A-215ENST00000543359 Q6AWC8 147 aa9.07□□□□□ -0.96
TNFRSF1A-215ENST00000543359 PQLC2Q6ZP29 291 aa9.07□□□□□ -0.96
TNFRSF1A-215ENST00000543359 ARL6IP6Q8N6S5 226 aa9.07□□□□□ -0.96
TNFRSF1A-215ENST00000543359 OR10G4Q8NGN3 311 aa9.07□□□□□ -0.96
TNFRSF1A-215ENST00000543359 OR10G9Q8NGN4 311 aa9.07□□□□□ -0.96
TNFRSF1A-215ENST00000543359 OR10G7Q8NGN6 311 aa9.07□□□□□ -0.96
TNFRSF1A-215ENST00000543359 SUN5Q8TC36 379 aa9.07□□□□□ -0.96
TNFRSF1A-215ENST00000543359 TVP23CQ96ET8 276 aa9.07□□□□□ -0.96
TNFRSF1A-215ENST00000543359 HMGB3O15347 200 aaKnown RBP9.06□□□□□ -0.96
TNFRSF1A-215ENST00000543359 STAG3L2P0CL84 134 aa9.06□□□□□ -0.96
TNFRSF1A-215ENST00000543359 STAG3L3P0CL85 134 aa9.06□□□□□ -0.96
TNFRSF1A-215ENST00000543359 ATP6V0CP27449 155 aa9.06□□□□□ -0.96
TNFRSF1A-215ENST00000543359 HYLS1Q96M11 299 aa9.06□□□□□ -0.96
TNFRSF1A-215ENST00000543359 PSMG3Q9BT73 122 aaPredicted RBP9.06□□□□□ -0.96
TNFRSF1A-215ENST00000543359 UPK3BQ9BT76 320 aa9.06□□□□□ -0.96
TNFRSF1A-215ENST00000543359 KRTAP1-5Q9BYS1 174 aa9.06□□□□□ -0.96
TNFRSF1A-215ENST00000543359 MDFICQ9P1T7 246 aa9.06□□□□□ -0.96
TNFRSF1A-215ENST00000543359 TRGV2A0A075B6R0 118 aa9.05□□□□□ -0.96
TNFRSF1A-215ENST00000543359 A0A096LPF7 62 aa9.05□□□□□ -0.96
TNFRSF1A-215ENST00000543359 A0A1W2PPV4 95 aa9.05□□□□□ -0.96
TNFRSF1A-215ENST00000543359 G3V3Q6 166 aa9.05□□□□□ -0.96
TNFRSF1A-215ENST00000543359 GIPP09681 153 aaPredicted RBP9.05□□□□□ -0.96
TNFRSF1A-215ENST00000543359 MUC21Q5SSG8 566 aa9.05□□□□□ -0.96
TNFRSF1A-215ENST00000543359 HSD17B11Q8NBQ5 300 aa9.05□□□□□ -0.96
TNFRSF1A-215ENST00000543359 ASB13Q8WXK3 278 aa9.05□□□□□ -0.96
TNFRSF1A-215ENST00000543359 ST6GAL2Q96JF0 529 aa9.05□□□□□ -0.96
TNFRSF1A-215ENST00000543359 Q9H8V8 135 aa9.05□□□□□ -0.96
TNFRSF1A-215ENST00000543359 TRAV8-1A0A0A6YYK1 113 aa9.04□□□□□ -0.96
TNFRSF1A-215ENST00000543359 RNF222A6NCQ9 220 aa9.04□□□□□ -0.96
TNFRSF1A-215ENST00000543359 ARL14EPLP0DKL9 152 aa9.04□□□□□ -0.96
TNFRSF1A-215ENST00000543359 TDRG1Q3Y452 100 aa9.04□□□□□ -0.96
TNFRSF1A-215ENST00000543359 SOHLH1Q5JUK2 328 aa9.04□□□□□ -0.96
TNFRSF1A-215ENST00000543359 GOLT1AQ6ZVE7 132 aa9.04□□□□□ -0.96
TNFRSF1A-215ENST00000543359 RAB24Q969Q5 203 aa9.04□□□□□ -0.96
TNFRSF1A-215ENST00000543359 KRTAP17-1Q9BYP8 105 aa9.04□□□□□ -0.96
TNFRSF1A-215ENST00000543359 SH3BGRL3Q9H299 93 aa9.04□□□□□ -0.96
TNFRSF1A-215ENST00000543359 MRPL16Q9NX20 251 aaKnown RBP9.04□□□□□ -0.96
TNFRSF1A-215ENST00000543359 CDC34P49427 236 aaPredicted RBP9.03□□□□□ -0.96
TNFRSF1A-215ENST00000543359 GNG5P63218 68 aa9.03□□□□□ -0.96
TNFRSF1A-215ENST00000543359 SERF2P84101 59 aa9.03□□□□□ -0.96
TNFRSF1A-215ENST00000543359 TNP2Q05952 138 aa9.03□□□□□ -0.96
TNFRSF1A-215ENST00000543359 FHL2Q14192 279 aa9.03□□□□□ -0.96
TNFRSF1A-215ENST00000543359 C6orf223Q8N319 242 aa9.03□□□□□ -0.96
TNFRSF1A-215ENST00000543359 RASL10AQ92737 203 aa9.03□□□□□ -0.96
TNFRSF1A-215ENST00000543359 ARPC5LQ9BPX5 153 aa9.03□□□□□ -0.96
TNFRSF1A-215ENST00000543359 MRPS16Q9Y3D3 137 aaKnown RBP9.03□□□□□ -0.96
TNFRSF1A-215ENST00000543359 IGHV3-53P01767 116 aa9.02□□□□□ -0.97
TNFRSF1A-215ENST00000543359 GCHFRP30047 84 aa9.02□□□□□ -0.97
TNFRSF1A-215ENST00000543359 ZNF415Q09FC8 603 aa9.02□□□□□ -0.97
TNFRSF1A-215ENST00000543359 TMEM183BQ1AE95 376 aa9.02□□□□□ -0.97
TNFRSF1A-215ENST00000543359 FAM74A1Q5RGS3 127 aa9.02□□□□□ -0.97
TNFRSF1A-215ENST00000543359 RPL7L1Q6DKI1 246 aaKnown RBP9.02□□□□□ -0.97
TNFRSF1A-215ENST00000543359 TMEM183AQ8IXX5 376 aa9.02□□□□□ -0.97
TNFRSF1A-215ENST00000543359 CMTM2Q8TAZ6 248 aa9.02□□□□□ -0.97
TNFRSF1A-215ENST00000543359 TNFSF18Q9UNG2 199 aa9.02□□□□□ -0.97
TNFRSF1A-215ENST00000543359 PCLOQ9Y6V0 5065 aa9.01□□□□□ -0.97
TNFRSF1A-215ENST00000543359 GNRH2O43555 120 aa9.01□□□□□ -0.97
TNFRSF1A-215ENST00000543359 IGLV2-11P01706 119 aa9.01□□□□□ -0.97
TNFRSF1A-215ENST00000543359 MBP02144 154 aa9.01□□□□□ -0.97
TNFRSF1A-215ENST00000543359 CRYBA4P53673 196 aa9.01□□□□□ -0.97
TNFRSF1A-215ENST00000543359 IQCF2Q8IXL9 164 aa9.01□□□□□ -0.97
TNFRSF1A-215ENST00000543359 SPXQ9BT56 116 aa9.01□□□□□ -0.97
TNFRSF1A-215ENST00000543359 RPH3ALQ9UNE2 315 aa9.01□□□□□ -0.97
TNFRSF1A-215ENST00000543359 HHLA3Q9XRX5 114 aa9.01□□□□□ -0.97
TNFRSF1A-215ENST00000543359 IGHV3-16A0A0C4DH30 117 aa9□□□□□ -0.97
TNFRSF1A-215ENST00000543359 PAX4O43316 350 aa9□□□□□ -0.97
TNFRSF1A-215ENST00000543359 TCRAP04437 139 aa9□□□□□ -0.97
TNFRSF1A-215ENST00000543359 MED14OSP0DP75 135 aa9□□□□□ -0.97
TNFRSF1A-215ENST00000543359 ZNF726P1Q15940 193 aa9□□□□□ -0.97
TNFRSF1A-215ENST00000543359 FAM159AQ6UWV7 190 aa9□□□□□ -0.97
TNFRSF1A-215ENST00000543359 INO80EQ8NBZ0 244 aaPredicted RBP9□□□□□ -0.97
TNFRSF1A-215ENST00000543359 OR2T35Q8NGX2 323 aa9□□□□□ -0.97
TNFRSF1A-215ENST00000543359 ZNF479Q96JC4 524 aa9□□□□□ -0.97
TNFRSF1A-215ENST00000543359 SGK494Q96LW2 274 aa9□□□□□ -0.97
TNFRSF1A-215ENST00000543359 TREM1Q9NP99 234 aa9□□□□□ -0.97
TNFRSF1A-215ENST00000543359 PRO0255Q9UI72 69 aa9□□□□□ -0.97
TNFRSF1A-215ENST00000543359 ABCA13Q86UQ4 5058 aa9□□□□□ -0.97
TNFRSF1A-215ENST00000543359 TRGV11A0A075B6L2 103 aa8.99□□□□□ -0.97
TNFRSF1A-215ENST00000543359 TRAV21A0A0B4J279 112 aa8.99□□□□□ -0.97
TNFRSF1A-215ENST00000543359 A0A1W2PPQ1 181 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms