RNA–Protein interactions for RNA: ENST00000542845.3

LIMS1-214, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 5

Gene LIMS1, Length 727 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-214ENST00000542845 DNAJC30Q96LL9 226 aa3.05□□□□□ -1.92
LIMS1-214ENST00000542845 SGK494Q96LW2 274 aa3.05□□□□□ -1.92
LIMS1-214ENST00000542845 TXNL4BQ9NX01 149 aaKnown RBP3.05□□□□□ -1.92
LIMS1-214ENST00000542845 HIGD1AQ9Y241 93 aa3.05□□□□□ -1.92
LIMS1-214ENST00000542845 A0A087X0K7 114 aa3.04□□□□□ -1.92
LIMS1-214ENST00000542845 A0A0A6YYH2 397 aa3.04□□□□□ -1.92
LIMS1-214ENST00000542845 TRAV8-1A0A0A6YYK1 113 aa3.04□□□□□ -1.92
LIMS1-214ENST00000542845 A0A0J9YXV3 536 aa3.04□□□□□ -1.92
LIMS1-214ENST00000542845 SMCO3A2RU48 225 aa3.04□□□□□ -1.92
LIMS1-214ENST00000542845 A6NJ64 397 aa3.04□□□□□ -1.92
LIMS1-214ENST00000542845 H3BRN7 92 aa3.04□□□□□ -1.92
LIMS1-214ENST00000542845 PANO1I0J062 215 aa3.04□□□□□ -1.92
LIMS1-214ENST00000542845 TNFAIP8O95379 198 aa3.04□□□□□ -1.92
LIMS1-214ENST00000542845 IL5P05113 134 aa3.04□□□□□ -1.92
LIMS1-214ENST00000542845 SLC25A5P05141 298 aaKnown RBP3.04□□□□□ -1.92
LIMS1-214ENST00000542845 IAPPP10997 89 aa3.04□□□□□ -1.92
LIMS1-214ENST00000542845 KRTAP10-8P60410 259 aa3.04□□□□□ -1.92
LIMS1-214ENST00000542845 RND3P61587 244 aa3.04□□□□□ -1.92
LIMS1-214ENST00000542845 RAB11AP62491 216 aa3.04□□□□□ -1.92
LIMS1-214ENST00000542845 AKR1C1Q04828 323 aa3.04□□□□□ -1.92
LIMS1-214ENST00000542845 LAGE3Q14657 143 aa3.04□□□□□ -1.92
LIMS1-214ENST00000542845 OPCMLQ14982 345 aa3.04□□□□□ -1.92
LIMS1-214ENST00000542845 SCGB2B2Q4G0G5 96 aa3.04□□□□□ -1.92
LIMS1-214ENST00000542845 MUC21Q5SSG8 566 aa3.04□□□□□ -1.92
LIMS1-214ENST00000542845 GPR107Q5VW38 600 aa3.04□□□□□ -1.92
LIMS1-214ENST00000542845 Q6ZQT7 251 aa3.04□□□□□ -1.92
LIMS1-214ENST00000542845 SH2D6Q7Z4S9 175 aa3.04□□□□□ -1.92
LIMS1-214ENST00000542845 IQCF2Q8IXL9 164 aa3.04□□□□□ -1.92
LIMS1-214ENST00000542845 SELENOHQ8IZQ5 122 aaKnown RBP3.04□□□□□ -1.92
LIMS1-214ENST00000542845 CCDC71LQ8N9Z2 235 aa3.04□□□□□ -1.92
LIMS1-214ENST00000542845 OR4C5Q8NGB2 326 aa3.04□□□□□ -1.92
LIMS1-214ENST00000542845 OR4D10Q8NGI6 311 aa3.04□□□□□ -1.92
LIMS1-214ENST00000542845 OR1S1Q8NH92 325 aa3.04□□□□□ -1.92
LIMS1-214ENST00000542845 LHFPL5Q8TAF8 219 aa3.04□□□□□ -1.92
LIMS1-214ENST00000542845 RMI2Q96E14 147 aa3.04□□□□□ -1.92
LIMS1-214ENST00000542845 SHANK2-AS3Q9BTD1 123 aa3.04□□□□□ -1.92
LIMS1-214ENST00000542845 ZNF331Q9NQX6 463 aaPredicted RBP3.04□□□□□ -1.92
LIMS1-214ENST00000542845 NDUFB11Q9NX14 153 aa3.04□□□□□ -1.92
LIMS1-214ENST00000542845 IGHV1OR15-1A0A075B7D0 117 aa3.03□□□□□ -1.92
LIMS1-214ENST00000542845 IGHV3-73A0A0B4J1V6 119 aa3.03□□□□□ -1.92
LIMS1-214ENST00000542845 SLC17A3O00476 420 aa3.03□□□□□ -1.92
LIMS1-214ENST00000542845 PHOX2AO14813 284 aa3.03□□□□□ -1.92
LIMS1-214ENST00000542845 HYPMO75409 117 aa3.03□□□□□ -1.92
LIMS1-214ENST00000542845 PFN1P07737 140 aaKnown RBP3.03□□□□□ -1.92
LIMS1-214ENST00000542845 SULT1A3P0DMM9 295 aa3.03□□□□□ -1.92
LIMS1-214ENST00000542845 SULT1A4P0DMN0 295 aa3.03□□□□□ -1.92
LIMS1-214ENST00000542845 IBA57Q5T440 356 aaKnown RBP3.03□□□□□ -1.92
LIMS1-214ENST00000542845 LCN15Q6UWW0 184 aa3.03□□□□□ -1.92
LIMS1-214ENST00000542845 SNX29P2Q8IUI4 249 aa3.03□□□□□ -1.92
LIMS1-214ENST00000542845 PACRGLQ8N7B6 248 aa3.03□□□□□ -1.92
LIMS1-214ENST00000542845 OR10G4Q8NGN3 311 aa3.03□□□□□ -1.92
LIMS1-214ENST00000542845 ZFAND1Q8TCF1 268 aa3.03□□□□□ -1.92
LIMS1-214ENST00000542845 MARCH1Q8TCQ1 289 aa3.03□□□□□ -1.92
LIMS1-214ENST00000542845 GTSF1Q8WW33 167 aa3.03□□□□□ -1.92
LIMS1-214ENST00000542845 ZC2HC1AQ96GY0 325 aa3.03□□□□□ -1.92
LIMS1-214ENST00000542845 ZNF486Q96H40 463 aaPredicted RBP3.03□□□□□ -1.92
LIMS1-214ENST00000542845 SLC50A1Q9BRV3 221 aa3.03□□□□□ -1.92
LIMS1-214ENST00000542845 ALKBH7Q9BT30 221 aaPredicted RBP3.03□□□□□ -1.92
LIMS1-214ENST00000542845 ARL6Q9H0F7 186 aa3.03□□□□□ -1.92
LIMS1-214ENST00000542845 TMEM222Q9H0R3 208 aa3.03□□□□□ -1.92
LIMS1-214ENST00000542845 DUSP21Q9H596 190 aa3.03□□□□□ -1.92
LIMS1-214ENST00000542845 ANAPC10Q9UM13 185 aa3.03□□□□□ -1.92
LIMS1-214ENST00000542845 KIF25-AS1Q9Y6Z4 181 aa3.03□□□□□ -1.92
LIMS1-214ENST00000542845 LOC100506127A0A0U1RQW1 187 aa3.02□□□□□ -1.93
LIMS1-214ENST00000542845 FABP12A6NFH5 140 aa3.02□□□□□ -1.93
LIMS1-214ENST00000542845 CDS2O95674 445 aa3.02□□□□□ -1.93
LIMS1-214ENST00000542845 SLPIP03973 132 aa3.02□□□□□ -1.93
LIMS1-214ENST00000542845 OR10J4P0C629 311 aa3.02□□□□□ -1.93
LIMS1-214ENST00000542845 OR4E1P0C645 316 aa3.02□□□□□ -1.93
LIMS1-214ENST00000542845 LINC00869P0C866 280 aa3.02□□□□□ -1.93
LIMS1-214ENST00000542845 PRR4Q16378 134 aa3.02□□□□□ -1.93
LIMS1-214ENST00000542845 C14orf177Q52M58 125 aa3.02□□□□□ -1.93
LIMS1-214ENST00000542845 REG3GQ6UW15 175 aa3.02□□□□□ -1.93
LIMS1-214ENST00000542845 CYP2G1PQ6ZSU1 146 aa3.02□□□□□ -1.93
LIMS1-214ENST00000542845 PRSS48Q7RTY5 328 aa3.02□□□□□ -1.93
LIMS1-214ENST00000542845 SAMD12Q8N8I0 201 aa3.02□□□□□ -1.93
LIMS1-214ENST00000542845 OR13C8Q8NGS7 320 aa3.02□□□□□ -1.93
LIMS1-214ENST00000542845 GLYATL2Q8WU03 294 aa3.02□□□□□ -1.93
LIMS1-214ENST00000542845 C7orf33Q8WU49 177 aa3.02□□□□□ -1.93
LIMS1-214ENST00000542845 UBE2WQ96B02 151 aa3.02□□□□□ -1.93
LIMS1-214ENST00000542845 C2orf50Q96LR7 162 aa3.02□□□□□ -1.93
LIMS1-214ENST00000542845 GTSF1LQ9H1H1 148 aa3.02□□□□□ -1.93
LIMS1-214ENST00000542845 C11orf21Q9P2W6 132 aa3.02□□□□□ -1.93
LIMS1-214ENST00000542845 KLK12Q9UKR0 248 aa3.02□□□□□ -1.93
LIMS1-214ENST00000542845 C14orf166Q9Y224 244 aaKnown RBP3.02□□□□□ -1.93
LIMS1-214ENST00000542845 URGCP-MRPS24S4R325 110 aa3.02□□□□□ -1.93
LIMS1-214ENST00000542845 IGLV5-45A0A087WSX0 123 aa3.01□□□□□ -1.93
LIMS1-214ENST00000542845 TRAV4A0A0B4J268 109 aa3.01□□□□□ -1.93
LIMS1-214ENST00000542845 SMIM31A0A1B0GVY4 71 aa3.01□□□□□ -1.93
LIMS1-214ENST00000542845 WRBO00258 174 aa3.01□□□□□ -1.93
LIMS1-214ENST00000542845 CD3DP04234 171 aa3.01□□□□□ -1.93
LIMS1-214ENST00000542845 AKR1C4P17516 323 aa3.01□□□□□ -1.93
LIMS1-214ENST00000542845 SMCO1Q147U7 214 aa3.01□□□□□ -1.93
LIMS1-214ENST00000542845 TMEM183BQ1AE95 376 aa3.01□□□□□ -1.93
LIMS1-214ENST00000542845 RNASE10Q5GAN6 216 aaKnown RBP3.01□□□□□ -1.93
LIMS1-214ENST00000542845 UBE2NLQ5JXB2 153 aa3.01□□□□□ -1.93
LIMS1-214ENST00000542845 DPPA3Q6W0C5 159 aa3.01□□□□□ -1.93
LIMS1-214ENST00000542845 LINC00305Q7Z4B0 112 aa3.01□□□□□ -1.93
LIMS1-214ENST00000542845 S100A7AQ86SG5 101 aa3.01□□□□□ -1.93
LIMS1-214ENST00000542845 BPIFA4PQ86YQ2 179 aa3.01□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms