RNA–Protein interactions for RNA: ENST00000542841.1

SRGAP1-205, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 2

Gene SRGAP1, Length 836 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-205ENST00000542841 RNF182Q8N6D2 247 aa8.58□□□□□ -1.04
SRGAP1-205ENST00000542841 ZNF738Q8NE65 137 aa8.58□□□□□ -1.04
SRGAP1-205ENST00000542841 OR10G8Q8NGN5 311 aa8.58□□□□□ -1.04
SRGAP1-205ENST00000542841 LINC00477Q96M19 166 aa8.58□□□□□ -1.04
SRGAP1-205ENST00000542841 SPAG8Q99932 426 aaPredicted RBP8.58□□□□□ -1.04
SRGAP1-205ENST00000542841 ALMS1Q8TCU4 4167 aa8.58□□□□□ -1.04
SRGAP1-205ENST00000542841 TRAV8-1A0A0A6YYK1 113 aa8.57□□□□□ -1.04
SRGAP1-205ENST00000542841 OR4C46A6NHA9 309 aa8.57□□□□□ -1.04
SRGAP1-205ENST00000542841 ZNF705FA8MVS1 300 aaPredicted RBP8.57□□□□□ -1.04
SRGAP1-205ENST00000542841 SCO1O75880 301 aa8.57□□□□□ -1.04
SRGAP1-205ENST00000542841 MGST1P10620 155 aaKnown RBP8.57□□□□□ -1.04
SRGAP1-205ENST00000542841 CMC4P56277 68 aaPredicted RBP8.57□□□□□ -1.04
SRGAP1-205ENST00000542841 BTN1A1Q13410 526 aa8.57□□□□□ -1.04
SRGAP1-205ENST00000542841 IBA57Q5T440 356 aaKnown RBP8.57□□□□□ -1.04
SRGAP1-205ENST00000542841 IGFL4Q6B9Z1 124 aa8.57□□□□□ -1.04
SRGAP1-205ENST00000542841 GTSCR1Q86UQ5 136 aa8.57□□□□□ -1.04
SRGAP1-205ENST00000542841 OR10J6PQ8NGY7 276 aa8.57□□□□□ -1.04
SRGAP1-205ENST00000542841 LINC00476Q8WZB0 136 aa8.57□□□□□ -1.04
SRGAP1-205ENST00000542841 BTF3L4Q96K17 158 aa8.57□□□□□ -1.04
SRGAP1-205ENST00000542841 RETNQ9HD89 108 aa8.57□□□□□ -1.04
SRGAP1-205ENST00000542841 HERC2O95714 4834 aa8.57□□□□□ -1.04
SRGAP1-205ENST00000542841 IGKV2-40A0A087WW87 121 aaPredicted RBP8.56□□□□□ -1.04
SRGAP1-205ENST00000542841 NPIPB6E9PJ23 425 aa8.56□□□□□ -1.04
SRGAP1-205ENST00000542841 LY6G6CO95867 125 aa8.56□□□□□ -1.04
SRGAP1-205ENST00000542841 IGKV2D-40P01614 121 aaPredicted RBP8.56□□□□□ -1.04
SRGAP1-205ENST00000542841 CT45A10P0DMU9 189 aa8.56□□□□□ -1.04
SRGAP1-205ENST00000542841 ZNF138P52744 262 aa8.56□□□□□ -1.04
SRGAP1-205ENST00000542841 ERVFC1-1P60608 527 aa8.56□□□□□ -1.04
SRGAP1-205ENST00000542841 CT83Q5H943 113 aa8.56□□□□□ -1.04
SRGAP1-205ENST00000542841 TMEM61Q8N0U2 210 aa8.56□□□□□ -1.04
SRGAP1-205ENST00000542841 GBGT1Q8N5D6 347 aa8.56□□□□□ -1.04
SRGAP1-205ENST00000542841 OR4B1Q8NGF8 309 aa8.56□□□□□ -1.04
SRGAP1-205ENST00000542841 C20orf173Q96LM9 149 aa8.56□□□□□ -1.04
SRGAP1-205ENST00000542841 ODF3Q96PU9 254 aa8.56□□□□□ -1.04
SRGAP1-205ENST00000542841 IGKV3-7A0A075B6H7 116 aa8.55□□□□□ -1.04
SRGAP1-205ENST00000542841 TRAV9-1A0A075B6T8 112 aa8.55□□□□□ -1.04
SRGAP1-205ENST00000542841 C19orf71A6NCJ1 209 aa8.55□□□□□ -1.04
SRGAP1-205ENST00000542841 PRAC2D3DTV9 90 aa8.55□□□□□ -1.04
SRGAP1-205ENST00000542841 S100PP25815 95 aa8.55□□□□□ -1.04
SRGAP1-205ENST00000542841 SMUG1Q53HV7 270 aa8.55□□□□□ -1.04
SRGAP1-205ENST00000542841 KCNIP4Q6PIL6 250 aa8.55□□□□□ -1.04
SRGAP1-205ENST00000542841 OR8A1Q8NGG7 326 aa8.55□□□□□ -1.04
SRGAP1-205ENST00000542841 DAZAP1Q96EP5 407 aaKnown RBP8.55□□□□□ -1.04
SRGAP1-205ENST00000542841 SGK494Q96LW2 274 aa8.55□□□□□ -1.04
SRGAP1-205ENST00000542841 VGLL1Q99990 258 aa8.55□□□□□ -1.04
SRGAP1-205ENST00000542841 FAM110AQ9BQ89 295 aa8.55□□□□□ -1.04
SRGAP1-205ENST00000542841 DUSP14O95147 198 aaKnown RBP8.54□□□□□ -1.04
SRGAP1-205ENST00000542841 OR5I1Q13606 314 aa8.54□□□□□ -1.04
SRGAP1-205ENST00000542841 CD300EQ496F6 205 aaPredicted RBP8.54□□□□□ -1.04
SRGAP1-205ENST00000542841 TMEM88Q6PEY1 159 aa8.54□□□□□ -1.04
SRGAP1-205ENST00000542841 FOXI2Q6ZQN5 318 aa8.54□□□□□ -1.04
SRGAP1-205ENST00000542841 WFDC3Q8IUB2 231 aa8.54□□□□□ -1.04
SRGAP1-205ENST00000542841 CBLN2Q8IUK8 224 aa8.54□□□□□ -1.04
SRGAP1-205ENST00000542841 AGPAT4-IT1Q9H0P7 198 aa8.54□□□□□ -1.04
SRGAP1-205ENST00000542841 V9GYV3 84 aa8.54□□□□□ -1.04
SRGAP1-205ENST00000542841 FAM231BA6NCW3 169 aa8.53□□□□□ -1.04
SRGAP1-205ENST00000542841 GATCO43716 136 aaKnown RBP8.53□□□□□ -1.04
SRGAP1-205ENST00000542841 P01737 135 aa8.53□□□□□ -1.04
SRGAP1-205ENST00000542841 ZNF688P0C7X2 276 aa8.53□□□□□ -1.04
SRGAP1-205ENST00000542841 RPL19P84098 196 aaKnown RBP8.53□□□□□ -1.04
SRGAP1-205ENST00000542841 PSMG4Q5JS54 123 aa8.53□□□□□ -1.04
SRGAP1-205ENST00000542841 EBLN2Q6P2I7 272 aa8.53□□□□□ -1.04
SRGAP1-205ENST00000542841 APRG1Q8IVJ8 170 aa8.53□□□□□ -1.04
SRGAP1-205ENST00000542841 NHLRC2Q8NBF2 726 aa8.53□□□□□ -1.04
SRGAP1-205ENST00000542841 NUDT10Q8NFP7 164 aa8.53□□□□□ -1.04
SRGAP1-205ENST00000542841 NUDT11Q96G61 164 aa8.53□□□□□ -1.04
SRGAP1-205ENST00000542841 ZC2HC1AQ96GY0 325 aa8.53□□□□□ -1.04
SRGAP1-205ENST00000542841 SAV1Q9H4B6 383 aaPredicted RBP8.53□□□□□ -1.04
SRGAP1-205ENST00000542841 IL36BQ9NZH7 164 aa8.53□□□□□ -1.04
SRGAP1-205ENST00000542841 TRBV24-1A0A075B6N3 115 aa8.52□□□□□ -1.05
SRGAP1-205ENST00000542841 A0A0J9YX75 114 aa8.52□□□□□ -1.05
SRGAP1-205ENST00000542841 A8MTW9 85 aa8.52□□□□□ -1.05
SRGAP1-205ENST00000542841 ZNF705GA8MUZ8 300 aaPredicted RBP8.52□□□□□ -1.05
SRGAP1-205ENST00000542841 PFN1P07737 140 aaKnown RBP8.52□□□□□ -1.05
SRGAP1-205ENST00000542841 CRISP2P16562 243 aa8.52□□□□□ -1.05
SRGAP1-205ENST00000542841 TFPI2P48307 235 aa8.52□□□□□ -1.05
SRGAP1-205ENST00000542841 HIST1H1AQ02539 215 aaPredicted RBP8.52□□□□□ -1.05
SRGAP1-205ENST00000542841 ERCC8Q13216 396 aa8.52□□□□□ -1.05
SRGAP1-205ENST00000542841 ELOBQ15370 118 aa8.52□□□□□ -1.05
SRGAP1-205ENST00000542841 FAM162BQ5T6X4 162 aa8.52□□□□□ -1.05
SRGAP1-205ENST00000542841 PRR27Q6MZM9 219 aa8.52□□□□□ -1.05
SRGAP1-205ENST00000542841 LINC00322Q6ZN03 302 aaPredicted RBP8.52□□□□□ -1.05
SRGAP1-205ENST00000542841 FAM19A4Q96LR4 140 aa8.52□□□□□ -1.05
SRGAP1-205ENST00000542841 YPEL4Q96NS1 127 aa8.52□□□□□ -1.05
SRGAP1-205ENST00000542841 CLUHP3Q96NS8 147 aa8.52□□□□□ -1.05
SRGAP1-205ENST00000542841 GFRA4Q9GZZ7 299 aa8.52□□□□□ -1.05
SRGAP1-205ENST00000542841 RNASE7Q9H1E1 156 aaKnown RBP8.52□□□□□ -1.05
SRGAP1-205ENST00000542841 RPP21Q9H633 154 aaKnown RBP8.52□□□□□ -1.05
SRGAP1-205ENST00000542841 KMT2AQ03164 3969 aa8.51□□□□□ -1.05
SRGAP1-205ENST00000542841 XKRY2A2RUG3 117 aa8.51□□□□□ -1.05
SRGAP1-205ENST00000542841 FABP5P3A8MUU1 101 aa8.51□□□□□ -1.05
SRGAP1-205ENST00000542841 A8MWL6 223 aa8.51□□□□□ -1.05
SRGAP1-205ENST00000542841 RPS20P60866 119 aaKnown RBP8.51□□□□□ -1.05
SRGAP1-205ENST00000542841 FAM24BQ8N5W8 94 aa8.51□□□□□ -1.05
SRGAP1-205ENST00000542841 Q8TAT8 98 aa8.51□□□□□ -1.05
SRGAP1-205ENST00000542841 C8orf49Q96NF6 230 aa8.51□□□□□ -1.05
SRGAP1-205ENST00000542841 PYGO2Q9BRQ0 406 aa8.51□□□□□ -1.05
SRGAP1-205ENST00000542841 SMIM27A0A1W2PRY6 76 aa8.5□□□□□ -1.05
SRGAP1-205ENST00000542841 COLCA2A8K830 154 aa8.5□□□□□ -1.05
SRGAP1-205ENST00000542841 TSPOP30536 169 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms