RNA–Protein interactions for RNA: ENST00000542813.2

SFSWAP-211, Transcript of splicing factor SWAP, humanhuman

TSL 3

Gene SFSWAP, Length 373 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-211ENST00000542813 PMCHL1Q16048 86 aa2.55□□□□□ -2
SFSWAP-211ENST00000542813 TMEM78Q5T7P6 136 aa2.55□□□□□ -2
SFSWAP-211ENST00000542813 OBSCNQ5VST9 7968 aa2.55□□□□□ -2
SFSWAP-211ENST00000542813 DPPA3Q6W0C5 159 aa2.55□□□□□ -2
SFSWAP-211ENST00000542813 Q6ZRU5 148 aa2.55□□□□□ -2
SFSWAP-211ENST00000542813 LYPD6Q86Y78 171 aa2.55□□□□□ -2
SFSWAP-211ENST00000542813 MKXQ8IYA7 352 aa2.55□□□□□ -2
SFSWAP-211ENST00000542813 ADGRG4Q8IZF6 3080 aa2.55□□□□□ -2
SFSWAP-211ENST00000542813 TTC9CQ8N5M4 171 aa2.55□□□□□ -2
SFSWAP-211ENST00000542813 CCDC168Q8NDH2 2452 aa2.55□□□□□ -2
SFSWAP-211ENST00000542813 OR51T1Q8NGJ9 327 aa2.55□□□□□ -2
SFSWAP-211ENST00000542813 OR4K13Q8NH42 304 aa2.55□□□□□ -2
SFSWAP-211ENST00000542813 CMTM2Q8TAZ6 248 aa2.55□□□□□ -2
SFSWAP-211ENST00000542813 STARD4Q96DR4 205 aa2.55□□□□□ -2
SFSWAP-211ENST00000542813 DNAJC30Q96LL9 226 aa2.55□□□□□ -2
SFSWAP-211ENST00000542813 C2orf50Q96LR7 162 aa2.55□□□□□ -2
SFSWAP-211ENST00000542813 AMELYQ99218 206 aa2.55□□□□□ -2
SFSWAP-211ENST00000542813 EFCAB11Q9BUY7 163 aa2.55□□□□□ -2
SFSWAP-211ENST00000542813 PECRQ9BY49 303 aa2.55□□□□□ -2
SFSWAP-211ENST00000542813 ULBP3Q9BZM4 244 aa2.55□□□□□ -2
SFSWAP-211ENST00000542813 TMEM133Q9H2Q1 129 aa2.55□□□□□ -2
SFSWAP-211ENST00000542813 NPVFQ9HCQ7 196 aa2.55□□□□□ -2
SFSWAP-211ENST00000542813 LINC00527Q9UJ94 153 aa2.55□□□□□ -2
SFSWAP-211ENST00000542813 ANAPC10Q9UM13 185 aa2.55□□□□□ -2
SFSWAP-211ENST00000542813 CYSLTR1Q9Y271 337 aa2.55□□□□□ -2
SFSWAP-211ENST00000542813 HS3ST2Q9Y278 367 aa2.55□□□□□ -2
SFSWAP-211ENST00000542813 CELSR1Q9NYQ6 3014 aa2.54□□□□□ -2
SFSWAP-211ENST00000542813 HIVEP1P15822 2718 aa2.54□□□□□ -2
SFSWAP-211ENST00000542813 ODAMA1E959 279 aa2.54□□□□□ -2
SFSWAP-211ENST00000542813 OR2T8A6NH00 312 aa2.54□□□□□ -2
SFSWAP-211ENST00000542813 NUPR1O60356 82 aa2.54□□□□□ -2
SFSWAP-211ENST00000542813 HMGN2P05204 90 aaKnown RBP2.54□□□□□ -2
SFSWAP-211ENST00000542813 LINC00869P0C866 280 aa2.54□□□□□ -2
SFSWAP-211ENST00000542813 HIST1H1TP22492 207 aaPredicted RBP2.54□□□□□ -2
SFSWAP-211ENST00000542813 NPY1RP25929 384 aa2.54□□□□□ -2
SFSWAP-211ENST00000542813 SRP14P37108 136 aaKnown RBP2.54□□□□□ -2
SFSWAP-211ENST00000542813 SPINT3P49223 89 aa2.54□□□□□ -2
SFSWAP-211ENST00000542813 SEC11AP67812 179 aa2.54□□□□□ -2
SFSWAP-211ENST00000542813 Q0VG73 95 aa2.54□□□□□ -2
SFSWAP-211ENST00000542813 MSMO1Q15800 293 aa2.54□□□□□ -2
SFSWAP-211ENST00000542813 MPV17LQ2QL34 196 aa2.54□□□□□ -2
SFSWAP-211ENST00000542813 BVES-AS1Q5T3Y7 98 aa2.54□□□□□ -2
SFSWAP-211ENST00000542813 IGFL2Q6UWQ7 119 aa2.54□□□□□ -2
SFSWAP-211ENST00000542813 Q6ZR03 302 aa2.54□□□□□ -2
SFSWAP-211ENST00000542813 TCF23Q7RTU1 214 aa2.54□□□□□ -2
SFSWAP-211ENST00000542813 TRAPPC6BQ86SZ2 158 aa2.54□□□□□ -2
SFSWAP-211ENST00000542813 ZNF615Q8N8J6 731 aa2.54□□□□□ -2
SFSWAP-211ENST00000542813 FAM213BQ8TBF2 198 aa2.54□□□□□ -2
SFSWAP-211ENST00000542813 PP6455Q8WZ26 134 aa2.54□□□□□ -2
SFSWAP-211ENST00000542813 HSPB9Q9BQS6 159 aa2.54□□□□□ -2
SFSWAP-211ENST00000542813 WDR61Q9GZS3 305 aaKnown RBP2.54□□□□□ -2
SFSWAP-211ENST00000542813 C11orf1Q9H5F2 150 aa2.54□□□□□ -2
SFSWAP-211ENST00000542813 ST20Q9HBF5 79 aa2.54□□□□□ -2
SFSWAP-211ENST00000542813 TAS2R4Q9NYW5 299 aa2.54□□□□□ -2
SFSWAP-211ENST00000542813 IER3IP1Q9Y5U9 82 aa2.54□□□□□ -2
SFSWAP-211ENST00000542813 SPENQ96T58 3664 aaKnown RBP2.54□□□□□ -2
SFSWAP-211ENST00000542813 HEATR5BQ9P2D3 2071 aa2.53□□□□□ -2
SFSWAP-211ENST00000542813 HEATR5AQ86XA9 2040 aa2.53□□□□□ -2
SFSWAP-211ENST00000542813 IGLV4-69A0A075B6H9 119 aa2.53□□□□□ -2
SFSWAP-211ENST00000542813 TRAV1-1A0A0B4J248 108 aa2.53□□□□□ -2
SFSWAP-211ENST00000542813 A0A1B0GWA3 101 aa2.53□□□□□ -2
SFSWAP-211ENST00000542813 A0A1W2PRE2 83 aa2.53□□□□□ -2
SFSWAP-211ENST00000542813 C5orf49A4QMS7 147 aa2.53□□□□□ -2
SFSWAP-211ENST00000542813 FABP5P3A8MUU1 101 aa2.53□□□□□ -2
SFSWAP-211ENST00000542813 C17orf112F2Z3M2 114 aa2.53□□□□□ -2
SFSWAP-211ENST00000542813 H3BRM9 83 aa2.53□□□□□ -2
SFSWAP-211ENST00000542813 DEDDO75618 318 aa2.53□□□□□ -2
SFSWAP-211ENST00000542813 CYB5AP00167 134 aa2.53□□□□□ -2
SFSWAP-211ENST00000542813 HRASP01112 189 aa2.53□□□□□ -2
SFSWAP-211ENST00000542813 HLA-DRB1P01911 266 aa2.53□□□□□ -2
SFSWAP-211ENST00000542813 DBIP07108 87 aaKnown RBP2.53□□□□□ -2
SFSWAP-211ENST00000542813 ZNF728P0DKX0 622 aa2.53□□□□□ -2
SFSWAP-211ENST00000542813 EVI2AP22794 236 aa2.53□□□□□ -2
SFSWAP-211ENST00000542813 RPS27P42677 84 aaKnown RBP2.53□□□□□ -2
SFSWAP-211ENST00000542813 PSMB3P49720 205 aa2.53□□□□□ -2
SFSWAP-211ENST00000542813 RHOBP62745 196 aa2.53□□□□□ -2
SFSWAP-211ENST00000542813 RPS28P62857 69 aaKnown RBP2.53□□□□□ -2
SFSWAP-211ENST00000542813 QRFPP83859 136 aa2.53□□□□□ -2
SFSWAP-211ENST00000542813 SP6Q3SY56 376 aa2.53□□□□□ -2
SFSWAP-211ENST00000542813 ABCA11PQ4W5N1 156 aa2.53□□□□□ -2
SFSWAP-211ENST00000542813 TMEM97Q5BJF2 176 aa2.53□□□□□ -2
SFSWAP-211ENST00000542813 MRPL2Q5T653 305 aaKnown RBP2.53□□□□□ -2
SFSWAP-211ENST00000542813 HES3Q5TGS1 186 aa2.53□□□□□ -2
SFSWAP-211ENST00000542813 Q5W150 140 aa2.53□□□□□ -2
SFSWAP-211ENST00000542813 ZNF880Q6PDB4 577 aa2.53□□□□□ -2
SFSWAP-211ENST00000542813 GLIPR1L1Q6UWM5 242 aa2.53□□□□□ -2
SFSWAP-211ENST00000542813 ATP5L2Q7Z4Y8 100 aa2.53□□□□□ -2
SFSWAP-211ENST00000542813 LHFPL1Q86WI0 220 aa2.53□□□□□ -2
SFSWAP-211ENST00000542813 LRRC25Q8N386 305 aaPredicted RBP2.53□□□□□ -2
SFSWAP-211ENST00000542813 ZNF676Q8N7Q3 588 aa2.53□□□□□ -2
SFSWAP-211ENST00000542813 TMEM75Q8N9X5 138 aa2.53□□□□□ -2
SFSWAP-211ENST00000542813 ZNF436-AS1Q8NC38 126 aaPredicted RBP2.53□□□□□ -2
SFSWAP-211ENST00000542813 ZNF439Q8NDP4 499 aa2.53□□□□□ -2
SFSWAP-211ENST00000542813 OR2T10Q8NGZ9 312 aa2.53□□□□□ -2
SFSWAP-211ENST00000542813 OR51H1Q8NH63 302 aa2.53□□□□□ -2
SFSWAP-211ENST00000542813 NMNAT3Q96T66 252 aa2.53□□□□□ -2
SFSWAP-211ENST00000542813 SDF2Q99470 211 aa2.53□□□□□ -2
SFSWAP-211ENST00000542813 GNB1LQ9BYB4 327 aa2.53□□□□□ -2
SFSWAP-211ENST00000542813 OR51I2Q9H344 312 aa2.53□□□□□ -2
SFSWAP-211ENST00000542813 HES4Q9HCC6 221 aa2.53□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms