RNA–Protein interactions for RNA: ENST00000542641.5

YBX3-213, Transcript of Y-box binding protein 3, humanhuman

TSL 4

Gene YBX3, Length 669 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-213ENST00000542641 RNF183Q96D59 192 aa8.45□□□□□ -1.06
YBX3-213ENST00000542641 TVP23CQ96ET8 276 aa8.45□□□□□ -1.06
YBX3-213ENST00000542641 SPATA25Q9BR10 227 aa8.45□□□□□ -1.06
YBX3-213ENST00000542641 TM2D3Q9BRN9 247 aa8.45□□□□□ -1.06
YBX3-213ENST00000542641 ZMAT4Q9H898 229 aa8.45□□□□□ -1.06
YBX3-213ENST00000542641 IGHV3OR16-12A0A075B7B8 117 aa8.44□□□□□ -1.06
YBX3-213ENST00000542641 TRAV12-3A0A0B4J271 114 aa8.44□□□□□ -1.06
YBX3-213ENST00000542641 TRBV6-1A0A0K0K1D8 114 aa8.44□□□□□ -1.06
YBX3-213ENST00000542641 KLLNB2CW77 178 aa8.44□□□□□ -1.06
YBX3-213ENST00000542641 TMEM250H0YL14 139 aa8.44□□□□□ -1.06
YBX3-213ENST00000542641 NHLRC4P0CG21 123 aaPredicted RBP8.44□□□□□ -1.06
YBX3-213ENST00000542641 RPL35P42766 123 aaKnown RBP8.44□□□□□ -1.06
YBX3-213ENST00000542641 CEBPGP53567 150 aa8.44□□□□□ -1.06
YBX3-213ENST00000542641 BTN1A1Q13410 526 aa8.44□□□□□ -1.06
YBX3-213ENST00000542641 PEA15Q15121 130 aa8.44□□□□□ -1.06
YBX3-213ENST00000542641 Q86TA4 180 aa8.44□□□□□ -1.06
YBX3-213ENST00000542641 TMEM208Q9BTX3 173 aa8.44□□□□□ -1.06
YBX3-213ENST00000542641 DERL1Q9BUN8 251 aa8.44□□□□□ -1.06
YBX3-213ENST00000542641 RETNQ9HD89 108 aa8.44□□□□□ -1.06
YBX3-213ENST00000542641 TP53TG1Q9Y2A0 90 aa8.44□□□□□ -1.06
YBX3-213ENST00000542641 ZFP30Q9Y2G7 519 aa8.44□□□□□ -1.06
YBX3-213ENST00000542641 GOLT1BQ9Y3E0 138 aa8.44□□□□□ -1.06
YBX3-213ENST00000542641 PRKDCP78527 4128 aaKnown RBP8.44□□□□□ -1.06
YBX3-213ENST00000542641 C7orf71A4D174 169 aa8.43□□□□□ -1.06
YBX3-213ENST00000542641 LTAP01374 205 aa8.43□□□□□ -1.06
YBX3-213ENST00000542641 TAS2R60P59551 318 aa8.43□□□□□ -1.06
YBX3-213ENST00000542641 SRSF3P84103 164 aaKnown RBP8.43□□□□□ -1.06
YBX3-213ENST00000542641 PRR9Q5T870 116 aa8.43□□□□□ -1.06
YBX3-213ENST00000542641 BAGE2Q86Y30 109 aa8.43□□□□□ -1.06
YBX3-213ENST00000542641 C1orf158Q8N1D5 194 aa8.43□□□□□ -1.06
YBX3-213ENST00000542641 C8orf49Q96NF6 230 aa8.43□□□□□ -1.06
YBX3-213ENST00000542641 LINC01587Q99440 93 aa8.43□□□□□ -1.06
YBX3-213ENST00000542641 OVOL2Q9BRP0 275 aa8.43□□□□□ -1.06
YBX3-213ENST00000542641 NIPSNAP3BQ9BS92 247 aa8.43□□□□□ -1.06
YBX3-213ENST00000542641 SMDT1Q9H4I9 107 aa8.43□□□□□ -1.06
YBX3-213ENST00000542641 RAB19A4D1S5 217 aa8.42□□□□□ -1.06
YBX3-213ENST00000542641 NDUFS6O75380 124 aaKnown RBP8.42□□□□□ -1.06
YBX3-213ENST00000542641 SRP19P09132 144 aaKnown RBP8.42□□□□□ -1.06
YBX3-213ENST00000542641 RBMY1A1P0DJD3 496 aaKnown RBP8.42□□□□□ -1.06
YBX3-213ENST00000542641 RBMY1CP0DJD4 496 aa8.42□□□□□ -1.06
YBX3-213ENST00000542641 RBMY1FQ15415 496 aaKnown RBP8.42□□□□□ -1.06
YBX3-213ENST00000542641 SMUG1Q53HV7 270 aa8.42□□□□□ -1.06
YBX3-213ENST00000542641 ZNF705AQ6ZN79 300 aaPredicted RBP8.42□□□□□ -1.06
YBX3-213ENST00000542641 TMEM256Q8N2U0 113 aa8.42□□□□□ -1.06
YBX3-213ENST00000542641 OR11H2Q8NH07 326 aa8.42□□□□□ -1.06
YBX3-213ENST00000542641 C20orf144Q9BQM9 153 aa8.42□□□□□ -1.06
YBX3-213ENST00000542641 DNAH9Q9NYC9 4486 aa8.41□□□□□ -1.06
YBX3-213ENST00000542641 C9JQL5 133 aa8.41□□□□□ -1.06
YBX3-213ENST00000542641 FAM229AH3BQW9 127 aa8.41□□□□□ -1.06
YBX3-213ENST00000542641 H7BYZ3 331 aa8.41□□□□□ -1.06
YBX3-213ENST00000542641 ZNF324O75467 553 aaPredicted RBP8.41□□□□□ -1.06
YBX3-213ENST00000542641 GCGP01275 180 aa8.41□□□□□ -1.06
YBX3-213ENST00000542641 HTN1P15515 57 aa8.41□□□□□ -1.06
YBX3-213ENST00000542641 GNG4P50150 75 aa8.41□□□□□ -1.06
YBX3-213ENST00000542641 ZNF674Q2M3X9 581 aa8.41□□□□□ -1.06
YBX3-213ENST00000542641 CENPWQ5EE01 88 aa8.41□□□□□ -1.06
YBX3-213ENST00000542641 TMEM183AQ8IXX5 376 aa8.41□□□□□ -1.06
YBX3-213ENST00000542641 NHLRC2Q8NBF2 726 aa8.41□□□□□ -1.06
YBX3-213ENST00000542641 PARLQ9H300 379 aa8.41□□□□□ -1.06
YBX3-213ENST00000542641 NBEAL2Q6ZNJ1 2754 aa8.41□□□□□ -1.06
YBX3-213ENST00000542641 TRAV21A0A0B4J279 112 aa8.4□□□□□ -1.06
YBX3-213ENST00000542641 ZNF80P51504 273 aaPredicted RBP8.4□□□□□ -1.06
YBX3-213ENST00000542641 Q6AWC8 147 aa8.4□□□□□ -1.06
YBX3-213ENST00000542641 Q6ZQT7 251 aa8.4□□□□□ -1.06
YBX3-213ENST00000542641 COX8CQ7Z4L0 72 aa8.4□□□□□ -1.06
YBX3-213ENST00000542641 ZC2HC1AQ96GY0 325 aa8.4□□□□□ -1.06
YBX3-213ENST00000542641 MLST8Q9BVC4 326 aa8.4□□□□□ -1.06
YBX3-213ENST00000542641 X6R8D5 127 aa8.4□□□□□ -1.06
YBX3-213ENST00000542641 TRBV20OR9-2A0A075B6H5 130 aa8.39□□□□□ -1.07
YBX3-213ENST00000542641 SMIM9A6NGZ8 99 aa8.39□□□□□ -1.07
YBX3-213ENST00000542641 ZNF705GA8MUZ8 300 aaPredicted RBP8.39□□□□□ -1.07
YBX3-213ENST00000542641 PFN1P07737 140 aaKnown RBP8.39□□□□□ -1.07
YBX3-213ENST00000542641 NEU1Q99519 415 aa8.39□□□□□ -1.07
YBX3-213ENST00000542641 SMIM7Q9BQ49 75 aa8.39□□□□□ -1.07
YBX3-213ENST00000542641 PYGO2Q9BRQ0 406 aa8.39□□□□□ -1.07
YBX3-213ENST00000542641 HUWE1Q7Z6Z7 4374 aaKnown RBP8.38□□□□□ -1.07
YBX3-213ENST00000542641 IGHV1OR15-1A0A075B7D0 117 aa8.38□□□□□ -1.07
YBX3-213ENST00000542641 FABP5P3A8MUU1 101 aa8.38□□□□□ -1.07
YBX3-213ENST00000542641 ZNF727A8MUV8 499 aa8.38□□□□□ -1.07
YBX3-213ENST00000542641 C9JCJ5 164 aa8.38□□□□□ -1.07
YBX3-213ENST00000542641 IGLV2-8P01709 118 aa8.38□□□□□ -1.07
YBX3-213ENST00000542641 PRM2P04554 102 aa8.38□□□□□ -1.07
YBX3-213ENST00000542641 MGST1P10620 155 aaKnown RBP8.38□□□□□ -1.07
YBX3-213ENST00000542641 MIFP14174 115 aa8.38□□□□□ -1.07
YBX3-213ENST00000542641 CRIP1P50238 77 aa8.38□□□□□ -1.07
YBX3-213ENST00000542641 RRN3P1Q2M238 152 aa8.38□□□□□ -1.07
YBX3-213ENST00000542641 FAM74A3Q4VXF1 159 aa8.38□□□□□ -1.07
YBX3-213ENST00000542641 MUC21Q5SSG8 566 aa8.38□□□□□ -1.07
YBX3-213ENST00000542641 FAM162BQ5T6X4 162 aa8.38□□□□□ -1.07
YBX3-213ENST00000542641 FAM159AQ6UWV7 190 aa8.38□□□□□ -1.07
YBX3-213ENST00000542641 COMMD7Q86VX2 200 aa8.38□□□□□ -1.07
YBX3-213ENST00000542641 SMIM12Q96EX1 92 aa8.38□□□□□ -1.07
YBX3-213ENST00000542641 NAGKQ9UJ70 344 aa8.38□□□□□ -1.07
YBX3-213ENST00000542641 LINC00862A6NCI5 91 aa8.37□□□□□ -1.07
YBX3-213ENST00000542641 PGPEP1LA6NFU8 196 aa8.37□□□□□ -1.07
YBX3-213ENST00000542641 CBY3A6NI87 242 aa8.37□□□□□ -1.07
YBX3-213ENST00000542641 AZU1P20160 251 aa8.37□□□□□ -1.07
YBX3-213ENST00000542641 SOHLH1Q5JUK2 328 aa8.37□□□□□ -1.07
YBX3-213ENST00000542641 PRR27Q6MZM9 219 aa8.37□□□□□ -1.07
YBX3-213ENST00000542641 UQCC3Q6UW78 93 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 208.8 ms