RNA–Protein interactions for RNA: ENST00000542032.1

LEMD3-204, Transcript of LEM domain containing 3, humanhuman

TSL 3

Gene LEMD3, Length 645 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-204ENST00000542032 HIGD2AQ9BW72 106 aa1.93□□□□□ -2.1
LEMD3-204ENST00000542032 C14orf132Q9NPU4 83 aa1.93□□□□□ -2.1
LEMD3-204ENST00000542032 NOP16Q9Y3C1 178 aaKnown RBP1.93□□□□□ -2.1
LEMD3-204ENST00000542032 WDR90Q96KV7 1748 aa1.93□□□□□ -2.1
LEMD3-204ENST00000542032 SHANK3Q9BYB0 1731 aa1.93□□□□□ -2.1
LEMD3-204ENST00000542032 CFTRP13569 1480 aa1.93□□□□□ -2.1
LEMD3-204ENST00000542032 HELZP42694 1942 aaKnown RBP1.93□□□□□ -2.1
LEMD3-204ENST00000542032 PLXNA3P51805 1871 aa1.92□□□□□ -2.1
LEMD3-204ENST00000542032 TRAV1-1A0A0B4J248 108 aa1.92□□□□□ -2.1
LEMD3-204ENST00000542032 TCRBV3S1A0A5B6 114 aa1.92□□□□□ -2.1
LEMD3-204ENST00000542032 BAALC-AS2P0C853 105 aa1.92□□□□□ -2.1
LEMD3-204ENST00000542032 SPANXN5Q5MJ07 72 aa1.92□□□□□ -2.1
LEMD3-204ENST00000542032 Q6AWC8 147 aa1.92□□□□□ -2.1
LEMD3-204ENST00000542032 Q6ZS92 163 aa1.92□□□□□ -2.1
LEMD3-204ENST00000542032 OR8B3Q8NGG8 313 aa1.92□□□□□ -2.1
LEMD3-204ENST00000542032 ATP6V0E2Q8NHE4 81 aa1.92□□□□□ -2.1
LEMD3-204ENST00000542032 Q96M85 177 aa1.92□□□□□ -2.1
LEMD3-204ENST00000542032 AQP10Q96PS8 301 aa1.92□□□□□ -2.1
LEMD3-204ENST00000542032 DPY30Q9C005 99 aa1.92□□□□□ -2.1
LEMD3-204ENST00000542032 R4GN34 69 aa1.92□□□□□ -2.1
LEMD3-204ENST00000542032 PLA2R1Q13018 1463 aa1.92□□□□□ -2.1
LEMD3-204ENST00000542032 NSD3Q9BZ95 1437 aa1.91□□□□□ -2.1
LEMD3-204ENST00000542032 SLX4Q8IY92 1834 aa1.91□□□□□ -2.1
LEMD3-204ENST00000542032 PHIPQ8WWQ0 1821 aa1.91□□□□□ -2.1
LEMD3-204ENST00000542032 AKAP11Q9UKA4 1901 aa1.91□□□□□ -2.1
LEMD3-204ENST00000542032 CPAMD8Q8IZJ3 1885 aa1.91□□□□□ -2.1
LEMD3-204ENST00000542032 ADGRB1O14514 1584 aa1.91□□□□□ -2.1
LEMD3-204ENST00000542032 NRKQ7Z2Y5 1582 aa1.91□□□□□ -2.1
LEMD3-204ENST00000542032 MUC21A0A0G2JKD1 596 aa1.91□□□□□ -2.1
LEMD3-204ENST00000542032 FAM24AA6NFZ4 105 aa1.91□□□□□ -2.1
LEMD3-204ENST00000542032 HMSDA8MTL9 139 aa1.91□□□□□ -2.1
LEMD3-204ENST00000542032 TMEM262E9PQX1 116 aa1.91□□□□□ -2.1
LEMD3-204ENST00000542032 J3QLW9 94 aa1.91□□□□□ -2.1
LEMD3-204ENST00000542032 PSCAO43653 123 aa1.91□□□□□ -2.1
LEMD3-204ENST00000542032 SNCGO76070 127 aa1.91□□□□□ -2.1
LEMD3-204ENST00000542032 PROSCO94903 275 aa1.91□□□□□ -2.1
LEMD3-204ENST00000542032 IL5P05113 134 aa1.91□□□□□ -2.1
LEMD3-204ENST00000542032 ZNF826PQ6ZT77 177 aa1.91□□□□□ -2.1
LEMD3-204ENST00000542032 VSTM2AQ8TAG5 236 aa1.91□□□□□ -2.1
LEMD3-204ENST00000542032 C10orf105Q8TEF2 133 aa1.91□□□□□ -2.1
LEMD3-204ENST00000542032 SPTSSAQ969W0 71 aa1.91□□□□□ -2.1
LEMD3-204ENST00000542032 C20orf166-AS1Q96NR2 134 aa1.91□□□□□ -2.1
LEMD3-204ENST00000542032 SMIM7Q9BQ49 75 aa1.91□□□□□ -2.1
LEMD3-204ENST00000542032 PRO1933Q9H354 126 aa1.91□□□□□ -2.1
LEMD3-204ENST00000542032 SLIT3O75094 1523 aa1.91□□□□□ -2.1
LEMD3-204ENST00000542032 PRR14LQ5THK1 2151 aa1.91□□□□□ -2.1
LEMD3-204ENST00000542032 QRICH2Q9H0J4 1663 aa1.9□□□□□ -2.1
LEMD3-204ENST00000542032 SCAF11Q99590 1463 aaKnown RBP1.9□□□□□ -2.11
LEMD3-204ENST00000542032 SCN3AQ9NY46 2000 aa1.9□□□□□ -2.11
LEMD3-204ENST00000542032 TRAV40A0A0B4J280 105 aa1.9□□□□□ -2.11
LEMD3-204ENST00000542032 C5orf67F2Z3F1 127 aa1.9□□□□□ -2.11
LEMD3-204ENST00000542032 EDF1O60869 148 aaKnown RBP1.9□□□□□ -2.11
LEMD3-204ENST00000542032 NDUFB6O95139 128 aa1.9□□□□□ -2.11
LEMD3-204ENST00000542032 UBL3O95164 117 aa1.9□□□□□ -2.11
LEMD3-204ENST00000542032 DSCR4P56555 118 aaPredicted RBP1.9□□□□□ -2.11
LEMD3-204ENST00000542032 NPC2P61916 151 aa1.9□□□□□ -2.11
LEMD3-204ENST00000542032 MOBPQ13875 183 aa1.9□□□□□ -2.11
LEMD3-204ENST00000542032 ZNF791Q3KP31 576 aaPredicted RBP1.9□□□□□ -2.11
LEMD3-204ENST00000542032 FAM19A2Q8N3H0 131 aa1.9□□□□□ -2.11
LEMD3-204ENST00000542032 MUCL1Q96DR8 90 aa1.9□□□□□ -2.11
LEMD3-204ENST00000542032 VAMP8Q9BV40 100 aa1.9□□□□□ -2.11
LEMD3-204ENST00000542032 TMEM242Q9NWH2 141 aa1.9□□□□□ -2.11
LEMD3-204ENST00000542032 AP4S1Q9Y587 144 aa1.9□□□□□ -2.11
LEMD3-204ENST00000542032 CCDC88CQ9P219 2028 aa1.9□□□□□ -2.11
LEMD3-204ENST00000542032 KIAA1551Q9HCM1 1747 aa1.89□□□□□ -2.11
LEMD3-204ENST00000542032 KIAA1549Q9HCM3 1950 aa1.89□□□□□ -2.11
LEMD3-204ENST00000542032 IGLV10-54A0A075B6I4 117 aa1.89□□□□□ -2.11
LEMD3-204ENST00000542032 TMSB15BA0A087X1C1 80 aa1.89□□□□□ -2.11
LEMD3-204ENST00000542032 E7EUB6 86 aa1.89□□□□□ -2.11
LEMD3-204ENST00000542032 GYPBP06028 91 aa1.89□□□□□ -2.11
LEMD3-204ENST00000542032 LINC00032P0C843 101 aa1.89□□□□□ -2.11
LEMD3-204ENST00000542032 PIPP12273 146 aaPredicted RBP1.89□□□□□ -2.11
LEMD3-204ENST00000542032 MIFP14174 115 aa1.89□□□□□ -2.11
LEMD3-204ENST00000542032 SSR2P43308 183 aa1.89□□□□□ -2.11
LEMD3-204ENST00000542032 HINT1P49773 126 aaPredicted RBP1.89□□□□□ -2.11
LEMD3-204ENST00000542032 ERHP84090 104 aaKnown RBP1.89□□□□□ -2.11
LEMD3-204ENST00000542032 SLC25A26Q70HW3 274 aa1.89□□□□□ -2.11
LEMD3-204ENST00000542032 FP248Q71RG6 208 aaPredicted RBP1.89□□□□□ -2.11
LEMD3-204ENST00000542032 ARPINQ7Z6K5 226 aa1.89□□□□□ -2.11
LEMD3-204ENST00000542032 HMGN2P46Q86SG4 172 aa1.89□□□□□ -2.11
LEMD3-204ENST00000542032 LINC00269Q8N2A0 174 aa1.89□□□□□ -2.11
LEMD3-204ENST00000542032 LYPD1Q8N2G4 141 aa1.89□□□□□ -2.11
LEMD3-204ENST00000542032 TMEM254Q8TBM7 123 aa1.89□□□□□ -2.11
LEMD3-204ENST00000542032 NDUFB11Q9NX14 153 aa1.89□□□□□ -2.11
LEMD3-204ENST00000542032 ADGRL2O95490 1459 aa1.88□□□□□ -2.11
LEMD3-204ENST00000542032 CCDC18Q5T9S5 1454 aa1.88□□□□□ -2.11
LEMD3-204ENST00000542032 COL1A2P08123 1366 aa1.88□□□□□ -2.11
LEMD3-204ENST00000542032 IGLV4-60A0A075B6I1 120 aa1.88□□□□□ -2.11
LEMD3-204ENST00000542032 IBA57-AS1B1ANH7 110 aa1.88□□□□□ -2.11
LEMD3-204ENST00000542032 E7EQL1 145 aa1.88□□□□□ -2.11
LEMD3-204ENST00000542032 ASAH2BP0C7U1 165 aa1.88□□□□□ -2.11
LEMD3-204ENST00000542032 PIRTP0C851 137 aa1.88□□□□□ -2.11
LEMD3-204ENST00000542032 DEFB113Q30KQ7 82 aa1.88□□□□□ -2.11
LEMD3-204ENST00000542032 PYY3Q5JQD4 70 aa1.88□□□□□ -2.11
LEMD3-204ENST00000542032 TSKUQ8WUA8 353 aa1.88□□□□□ -2.11
LEMD3-204ENST00000542032 DSCR8Q96T75 97 aa1.88□□□□□ -2.11
LEMD3-204ENST00000542032 ANKRD26Q9UPS8 1709 aa1.88□□□□□ -2.11
LEMD3-204ENST00000542032 MED14O60244 1454 aa1.88□□□□□ -2.11
LEMD3-204ENST00000542032 IGLV2-18A0A075B6J9 118 aa1.87□□□□□ -2.11
LEMD3-204ENST00000542032 A0A087WSZ3 146 aa1.87□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms