RNA–Protein interactions for RNA: ENST00000540918.2

TTC39C-203, Transcript of tetratricopeptide repeat domain 39C, humanhuman

TSL 2 BASIC

Gene TTC39C, Length 4,117 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39C-203ENST00000540918 PRAC2D3DTV9 90 aa7.45□□□□□ -1.22
TTC39C-203ENST00000540918 FOXE3Q13461 319 aa7.45□□□□□ -1.22
TTC39C-203ENST00000540918 OR10J3Q5JRS4 329 aa7.45□□□□□ -1.22
TTC39C-203ENST00000540918 HIST3H2BBQ8N257 126 aa7.45□□□□□ -1.22
TTC39C-203ENST00000540918 NPIPB6E9PJ23 425 aa7.45□□□□□ -1.22
TTC39C-203ENST00000540918 H3BRN7 92 aa7.45□□□□□ -1.22
TTC39C-203ENST00000540918 CACNG7P62955 275 aa7.45□□□□□ -1.22
TTC39C-203ENST00000540918 Q6ZS46 218 aa7.45□□□□□ -1.22
TTC39C-203ENST00000540918 FANCD2OSQ96PS1 177 aa7.45□□□□□ -1.22
TTC39C-203ENST00000540918 KLF2Q9Y5W3 355 aaPredicted RBP7.45□□□□□ -1.22
TTC39C-203ENST00000540918 COL4A2P08572 1712 aa7.45□□□□□ -1.22
TTC39C-203ENST00000540918 IGLV11-55A0A075B6I3 123 aa7.44□□□□□ -1.22
TTC39C-203ENST00000540918 OR11H12B2RN74 326 aa7.44□□□□□ -1.22
TTC39C-203ENST00000540918 F2Z2F3 143 aa7.44□□□□□ -1.22
TTC39C-203ENST00000540918 FNDC10F2Z333 226 aa7.44□□□□□ -1.22
TTC39C-203ENST00000540918 SLAQ13239 276 aa7.44□□□□□ -1.22
TTC39C-203ENST00000540918 TOMM7Q9P0U1 55 aa7.44□□□□□ -1.22
TTC39C-203ENST00000540918 FLNAP21333 2647 aaKnown RBP7.44□□□□□ -1.22
TTC39C-203ENST00000540918 C5orf52A6NGY3 159 aa7.44□□□□□ -1.22
TTC39C-203ENST00000540918 LINC00587B1AMM8 73 aa7.44□□□□□ -1.22
TTC39C-203ENST00000540918 PRR25Q96S07 402 aa7.44□□□□□ -1.22
TTC39C-203ENST00000540918 SMR3AQ99954 134 aa7.44□□□□□ -1.22
TTC39C-203ENST00000540918 ITPR3Q14573 2671 aa7.44□□□□□ -1.22
TTC39C-203ENST00000540918 ZNF876PQ49A33 203 aa7.44□□□□□ -1.22
TTC39C-203ENST00000540918 PYY3Q5JQD4 70 aa7.44□□□□□ -1.22
TTC39C-203ENST00000540918 GNB1LQ9BYB4 327 aa7.44□□□□□ -1.22
TTC39C-203ENST00000540918 THAP8Q8NA92 274 aa7.43□□□□□ -1.22
TTC39C-203ENST00000540918 RCHY1Q96PM5 261 aa7.43□□□□□ -1.22
TTC39C-203ENST00000540918 AGPAT4-IT1Q9H0P7 198 aa7.43□□□□□ -1.22
TTC39C-203ENST00000540918 GSN-AS1Q9NRJ2 163 aa7.43□□□□□ -1.22
TTC39C-203ENST00000540918 AVPP01185 164 aa7.43□□□□□ -1.22
TTC39C-203ENST00000540918 IFI27P40305 119 aaPredicted RBP7.43□□□□□ -1.22
TTC39C-203ENST00000540918 TMEM242Q9NWH2 141 aa7.43□□□□□ -1.22
TTC39C-203ENST00000540918 V9GYV3 84 aa7.43□□□□□ -1.22
TTC39C-203ENST00000540918 TRGV4A0A0C4DH28 118 aa7.43□□□□□ -1.22
TTC39C-203ENST00000540918 LINC01619G3V211 115 aa7.43□□□□□ -1.22
TTC39C-203ENST00000540918 GNRH2O43555 120 aa7.43□□□□□ -1.22
TTC39C-203ENST00000540918 SUMO2P61956 95 aaKnown RBP7.43□□□□□ -1.22
TTC39C-203ENST00000540918 C11orf71Q6IPW1 123 aa7.43□□□□□ -1.22
TTC39C-203ENST00000540918 SRSF8Q9BRL6 282 aaKnown RBP7.43□□□□□ -1.22
TTC39C-203ENST00000540918 EXPH5Q8NEV8 1989 aa7.42□□□□□ -1.22
TTC39C-203ENST00000540918 P0C879 139 aa7.42□□□□□ -1.22
TTC39C-203ENST00000540918 ANXA2RQ3ZCQ2 193 aa7.42□□□□□ -1.22
TTC39C-203ENST00000540918 PRSS57Q6UWY2 283 aa7.42□□□□□ -1.22
TTC39C-203ENST00000540918 GTSCR1Q86UQ5 136 aa7.42□□□□□ -1.22
TTC39C-203ENST00000540918 C8orf31Q8N9H6 132 aa7.42□□□□□ -1.22
TTC39C-203ENST00000540918 MSRB1Q9NZV6 116 aa7.42□□□□□ -1.22
TTC39C-203ENST00000540918 DUSP14O95147 198 aaKnown RBP7.42□□□□□ -1.22
TTC39C-203ENST00000540918 VWC2Q2TAL6 325 aa7.42□□□□□ -1.22
TTC39C-203ENST00000540918 FAM167A-AS1Q96KT0 104 aa7.42□□□□□ -1.22
TTC39C-203ENST00000540918 SPOCK3Q9BQ16 436 aa7.42□□□□□ -1.22
TTC39C-203ENST00000540918 PRDM13Q9H4Q3 707 aa7.42□□□□□ -1.22
TTC39C-203ENST00000540918 RNF114Q9Y508 228 aa7.42□□□□□ -1.22
TTC39C-203ENST00000540918 TACC2O95359 2948 aa7.42□□□□□ -1.22
TTC39C-203ENST00000540918 PSMB2P49721 201 aa7.42□□□□□ -1.22
TTC39C-203ENST00000540918 NPBQ8NG41 125 aa7.42□□□□□ -1.22
TTC39C-203ENST00000540918 C11orf1Q9H5F2 150 aa7.42□□□□□ -1.22
TTC39C-203ENST00000540918 PCSK5Q92824 1860 aa7.42□□□□□ -1.22
TTC39C-203ENST00000540918 GEMIN7Q9H840 131 aaKnown RBP7.42□□□□□ -1.22
TTC39C-203ENST00000540918 IGHV4OR15-8A0A075B7B6 117 aa7.41□□□□□ -1.22
TTC39C-203ENST00000540918 A0A087WW49 117 aa7.41□□□□□ -1.22
TTC39C-203ENST00000540918 HERVK_113P61574 105 aa7.41□□□□□ -1.22
TTC39C-203ENST00000540918 FAM209BQ5JX69 171 aa7.41□□□□□ -1.22
TTC39C-203ENST00000540918 RELNP78509 3460 aa7.41□□□□□ -1.22
TTC39C-203ENST00000540918 IGKV1D-37A0A075B6S9 117 aa7.41□□□□□ -1.22
TTC39C-203ENST00000540918 IGHV3-38A0A0C4DH36 116 aa7.41□□□□□ -1.22
TTC39C-203ENST00000540918 hDV102S1A0JD36 115 aa7.41□□□□□ -1.22
TTC39C-203ENST00000540918 NDUFA4O00483 81 aa7.41□□□□□ -1.22
TTC39C-203ENST00000540918 GATA1P15976 413 aaPredicted RBP7.41□□□□□ -1.22
TTC39C-203ENST00000540918 Q6AWC8 147 aa7.41□□□□□ -1.22
TTC39C-203ENST00000540918 SLC25A34Q6PIV7 304 aa7.41□□□□□ -1.22
TTC39C-203ENST00000540918 OR4C5Q8NGB2 326 aa7.41□□□□□ -1.22
TTC39C-203ENST00000540918 ST20Q9HBF5 79 aa7.41□□□□□ -1.22
TTC39C-203ENST00000540918 IGHV7-4-1A0A0J9YVY3 117 aa7.41□□□□□ -1.22
TTC39C-203ENST00000540918 EGR2P11161 476 aaPredicted RBP7.41□□□□□ -1.22
TTC39C-203ENST00000540918 C19orf54Q5BKX5 351 aa7.41□□□□□ -1.22
TTC39C-203ENST00000540918 LY6G5BQ8NDX9 201 aa7.41□□□□□ -1.22
TTC39C-203ENST00000540918 A0A096LPF7 62 aa7.4□□□□□ -1.22
TTC39C-203ENST00000540918 LYPD1Q8N2G4 141 aa7.4□□□□□ -1.22
TTC39C-203ENST00000540918 LYPD6BQ8NI32 183 aa7.4□□□□□ -1.22
TTC39C-203ENST00000540918 CFHR4Q92496 578 aa7.4□□□□□ -1.22
TTC39C-203ENST00000540918 HIST1H4GQ99525 98 aa7.4□□□□□ -1.22
TTC39C-203ENST00000540918 FLNCQ14315 2725 aa7.4□□□□□ -1.22
TTC39C-203ENST00000540918 J3QLI3 93 aa7.4□□□□□ -1.22
TTC39C-203ENST00000540918 GP9P14770 177 aa7.4□□□□□ -1.22
TTC39C-203ENST00000540918 ZNF415Q09FC8 603 aa7.4□□□□□ -1.22
TTC39C-203ENST00000540918 PDE6HQ13956 83 aa7.4□□□□□ -1.22
TTC39C-203ENST00000540918 CD300EQ496F6 205 aaPredicted RBP7.4□□□□□ -1.22
TTC39C-203ENST00000540918 ZNF503Q96F45 646 aa7.4□□□□□ -1.22
TTC39C-203ENST00000540918 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.4□□□□□ -1.23
TTC39C-203ENST00000540918 UBE2CO00762 179 aa7.4□□□□□ -1.23
TTC39C-203ENST00000540918 BUB3O43684 328 aa7.4□□□□□ -1.23
TTC39C-203ENST00000540918 NAA38Q9BRA0 125 aaKnown RBP7.4□□□□□ -1.23
TTC39C-203ENST00000540918 SMPXQ9UHP9 88 aa7.4□□□□□ -1.23
TTC39C-203ENST00000540918 LOC107984156A0A0G2JMH3 177 aa7.39□□□□□ -1.23
TTC39C-203ENST00000540918 TCF21O43680 179 aa7.39□□□□□ -1.23
TTC39C-203ENST00000540918 EIF4EBP1Q13541 118 aaPredicted RBP7.39□□□□□ -1.23
TTC39C-203ENST00000540918 ARL17AQ8IVW1 177 aa7.39□□□□□ -1.23
TTC39C-203ENST00000540918 CHD6Q8TD26 2715 aa7.39□□□□□ -1.23
TTC39C-203ENST00000540918 CCL24O00175 119 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms