RNA–Protein interactions for RNA: ENST00000540755.5

CYB561A3-216, Transcript of cytochrome b561 family member A3, humanhuman

TSL 1 (best)

Gene CYB561A3, Length 1,494 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYB561A3-216ENST00000540755 RASL11AQ6T310 242 aa10.66□□□□□ -0.7
CYB561A3-216ENST00000540755 LINC00322Q6ZN03 302 aaPredicted RBP10.66□□□□□ -0.7
CYB561A3-216ENST00000540755 OR4B1Q8NGF8 309 aa10.66□□□□□ -0.7
CYB561A3-216ENST00000540755 DAZAP1Q96EP5 407 aaKnown RBP10.66□□□□□ -0.7
CYB561A3-216ENST00000540755 ASCL2Q99929 193 aa10.66□□□□□ -0.7
CYB561A3-216ENST00000540755 C5orf52A6NGY3 159 aa10.65□□□□□ -0.7
CYB561A3-216ENST00000540755 PF4P02776 101 aa10.65□□□□□ -0.7
CYB561A3-216ENST00000540755 ZNF688P0C7X2 276 aa10.65□□□□□ -0.7
CYB561A3-216ENST00000540755 CD300EQ496F6 205 aaPredicted RBP10.65□□□□□ -0.7
CYB561A3-216ENST00000540755 SMUG1Q53HV7 270 aa10.65□□□□□ -0.7
CYB561A3-216ENST00000540755 PSMG4Q5JS54 123 aa10.65□□□□□ -0.7
CYB561A3-216ENST00000540755 SPAG8Q99932 426 aaPredicted RBP10.65□□□□□ -0.7
CYB561A3-216ENST00000540755 GPR61Q9BZJ8 451 aa10.65□□□□□ -0.7
CYB561A3-216ENST00000540755 TRBV7-9A0A0J9YWB2 115 aa10.64□□□□□ -0.71
CYB561A3-216ENST00000540755 SMIM27A0A1W2PRY6 76 aa10.64□□□□□ -0.71
CYB561A3-216ENST00000540755 P01737 135 aa10.64□□□□□ -0.71
CYB561A3-216ENST00000540755 TRGC2P03986 189 aa10.64□□□□□ -0.71
CYB561A3-216ENST00000540755 DEFA6Q01524 100 aa10.64□□□□□ -0.71
CYB561A3-216ENST00000540755 WDR73Q6P4I2 378 aa10.64□□□□□ -0.71
CYB561A3-216ENST00000540755 LINC00482Q8N8I6 264 aa10.64□□□□□ -0.71
CYB561A3-216ENST00000540755 SAV1Q9H4B6 383 aaPredicted RBP10.64□□□□□ -0.71
CYB561A3-216ENST00000540755 RPP21Q9H633 154 aaKnown RBP10.64□□□□□ -0.71
CYB561A3-216ENST00000540755 A8MWL6 223 aa10.63□□□□□ -0.71
CYB561A3-216ENST00000540755 MT-ND6P03923 174 aa10.63□□□□□ -0.71
CYB561A3-216ENST00000540755 ZNF705DP0CH99 300 aaPredicted RBP10.63□□□□□ -0.71
CYB561A3-216ENST00000540755 ZNF705BP0CI00 300 aaPredicted RBP10.63□□□□□ -0.71
CYB561A3-216ENST00000540755 CRIP1P50238 77 aa10.63□□□□□ -0.71
CYB561A3-216ENST00000540755 HIST1H1AQ02539 215 aaPredicted RBP10.63□□□□□ -0.71
CYB561A3-216ENST00000540755 FAM162BQ5T6X4 162 aa10.63□□□□□ -0.71
CYB561A3-216ENST00000540755 OR2K2Q8NGT1 345 aa10.63□□□□□ -0.71
CYB561A3-216ENST00000540755 FAM19A4Q96LR4 140 aa10.63□□□□□ -0.71
CYB561A3-216ENST00000540755 GFRA4Q9GZZ7 299 aa10.63□□□□□ -0.71
CYB561A3-216ENST00000540755 OR4C46A6NHA9 309 aa10.62□□□□□ -0.71
CYB561A3-216ENST00000540755 F6UB75 175 aa10.62□□□□□ -0.71
CYB561A3-216ENST00000540755 UBE2CO00762 179 aa10.62□□□□□ -0.71
CYB561A3-216ENST00000540755 SAP30O75446 220 aa10.62□□□□□ -0.71
CYB561A3-216ENST00000540755 DEFB1P60022 68 aa10.62□□□□□ -0.71
CYB561A3-216ENST00000540755 ZFP82Q8N141 532 aa10.62□□□□□ -0.71
CYB561A3-216ENST00000540755 A0A0J9YX75 114 aa10.61□□□□□ -0.71
CYB561A3-216ENST00000540755 IZUMO1RA6ND01 250 aa10.61□□□□□ -0.71
CYB561A3-216ENST00000540755 PHOX2AO14813 284 aa10.61□□□□□ -0.71
CYB561A3-216ENST00000540755 SH2D1AO60880 128 aa10.61□□□□□ -0.71
CYB561A3-216ENST00000540755 IGLV1-51P01701 117 aa10.61□□□□□ -0.71
CYB561A3-216ENST00000540755 ACTL10Q5JWF8 245 aa10.61□□□□□ -0.71
CYB561A3-216ENST00000540755 EBLN2Q6P2I7 272 aa10.61□□□□□ -0.71
CYB561A3-216ENST00000540755 FOXI2Q6ZQN5 318 aa10.61□□□□□ -0.71
CYB561A3-216ENST00000540755 TSKUQ8WUA8 353 aa10.61□□□□□ -0.71
CYB561A3-216ENST00000540755 GNB1LQ9BYB4 327 aa10.61□□□□□ -0.71
CYB561A3-216ENST00000540755 NAT8BQ9UHF3 227 aa10.61□□□□□ -0.71
CYB561A3-216ENST00000540755 CA1P00915 261 aaPredicted RBP10.61□□□□□ -0.71
CYB561A3-216ENST00000540755 CRISP2P16562 243 aa10.61□□□□□ -0.71
CYB561A3-216ENST00000540755 ZNF80P51504 273 aaPredicted RBP10.61□□□□□ -0.71
CYB561A3-216ENST00000540755 ATP5L2Q7Z4Y8 100 aa10.61□□□□□ -0.71
CYB561A3-216ENST00000540755 ODF3Q96PU9 254 aa10.61□□□□□ -0.71
CYB561A3-216ENST00000540755 ZNF256Q9Y2P7 627 aaPredicted RBP10.61□□□□□ -0.71
CYB561A3-216ENST00000540755 FABP5P3A8MUU1 101 aa10.6□□□□□ -0.71
CYB561A3-216ENST00000540755 HIST1H2BKO60814 126 aa10.6□□□□□ -0.71
CYB561A3-216ENST00000540755 DUSP14O95147 198 aaKnown RBP10.6□□□□□ -0.71
CYB561A3-216ENST00000540755 HIST1H2BJP06899 126 aa10.6□□□□□ -0.71
CYB561A3-216ENST00000540755 TRGC1P0CF51 173 aa10.6□□□□□ -0.71
CYB561A3-216ENST00000540755 HIST1H2BOP23527 126 aa10.6□□□□□ -0.71
CYB561A3-216ENST00000540755 HIST1H2BBP33778 126 aa10.6□□□□□ -0.71
CYB561A3-216ENST00000540755 HIST1H2BDP58876 126 aa10.6□□□□□ -0.71
CYB561A3-216ENST00000540755 SNRPEP62304 92 aaKnown RBP10.6□□□□□ -0.71
CYB561A3-216ENST00000540755 HIST1H2BCP62807 126 aa10.6□□□□□ -0.71
CYB561A3-216ENST00000540755 HIST2H2BEQ16778 126 aa10.6□□□□□ -0.71
CYB561A3-216ENST00000540755 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.6□□□□□ -0.71
CYB561A3-216ENST00000540755 GDF5OSQ5U4N7 250 aa10.6□□□□□ -0.71
CYB561A3-216ENST00000540755 APRG1Q8IVJ8 170 aa10.6□□□□□ -0.71
CYB561A3-216ENST00000540755 ZFAND2AQ8N6M9 145 aa10.6□□□□□ -0.71
CYB561A3-216ENST00000540755 OR2D3Q8NGH3 330 aa10.6□□□□□ -0.71
CYB561A3-216ENST00000540755 FRZBQ92765 325 aa10.6□□□□□ -0.71
CYB561A3-216ENST00000540755 HIST1H2BHQ93079 126 aa10.6□□□□□ -0.71
CYB561A3-216ENST00000540755 HIST1H2BNQ99877 126 aa10.6□□□□□ -0.71
CYB561A3-216ENST00000540755 HIST1H2BMQ99879 126 aa10.6□□□□□ -0.71
CYB561A3-216ENST00000540755 TRAPPC1Q9Y5R8 145 aa10.6□□□□□ -0.71
CYB561A3-216ENST00000540755 S100A8P05109 93 aa10.59□□□□□ -0.71
CYB561A3-216ENST00000540755 HOXA5P20719 270 aa10.59□□□□□ -0.71
CYB561A3-216ENST00000540755 DEFB131AP59861 70 aa10.59□□□□□ -0.71
CYB561A3-216ENST00000540755 MAP6D1Q9H9H5 199 aa10.59□□□□□ -0.71
CYB561A3-216ENST00000540755 XKRY2A2RUG3 117 aa10.58□□□□□ -0.72
CYB561A3-216ENST00000540755 FOXA3P55318 350 aaPredicted RBP10.58□□□□□ -0.72
CYB561A3-216ENST00000540755 COA6Q5JTJ3 125 aaKnown RBP10.58□□□□□ -0.72
CYB561A3-216ENST00000540755 Q6AWC8 147 aa10.58□□□□□ -0.72
CYB561A3-216ENST00000540755 NEU1Q99519 415 aa10.58□□□□□ -0.72
CYB561A3-216ENST00000540755 TMEM189A5PLL7 270 aa10.57□□□□□ -0.72
CYB561A3-216ENST00000540755 A8MTW9 85 aa10.57□□□□□ -0.72
CYB561A3-216ENST00000540755 KLLNB2CW77 178 aa10.57□□□□□ -0.72
CYB561A3-216ENST00000540755 HLA-DQA1P01909 254 aa10.57□□□□□ -0.72
CYB561A3-216ENST00000540755 HLA-DRB4P13762 266 aa10.57□□□□□ -0.72
CYB561A3-216ENST00000540755 CD33P20138 364 aa10.57□□□□□ -0.72
CYB561A3-216ENST00000540755 INSL3P51460 131 aa10.57□□□□□ -0.72
CYB561A3-216ENST00000540755 CMC4P56277 68 aaPredicted RBP10.57□□□□□ -0.72
CYB561A3-216ENST00000540755 TCL1AP56279 114 aa10.57□□□□□ -0.72
CYB561A3-216ENST00000540755 RPS20P60866 119 aaKnown RBP10.57□□□□□ -0.72
CYB561A3-216ENST00000540755 FABP9Q0Z7S8 132 aa10.57□□□□□ -0.72
CYB561A3-216ENST00000540755 LINC01559Q495D7 138 aa10.57□□□□□ -0.72
CYB561A3-216ENST00000540755 HLA-DRB4X5D2U9 266 aa10.57□□□□□ -0.72
CYB561A3-216ENST00000540755 HIGD1CA8MV81 97 aa10.56□□□□□ -0.72
CYB561A3-216ENST00000540755 LEPP41159 167 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms