RNA–Protein interactions for RNA: ENST00000540475.5

SEMA4D-223, Transcript of semaphorin 4D, humanhuman

TSL 3

Gene SEMA4D, Length 826 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-223ENST00000540475 ARL6IP6Q8N6S5 226 aa9.05□□□□□ -0.96
SEMA4D-223ENST00000540475 TMED6Q8WW62 240 aa9.05□□□□□ -0.96
SEMA4D-223ENST00000540475 ST6GAL2Q96JF0 529 aa9.05□□□□□ -0.96
SEMA4D-223ENST00000540475 TP53TG3Q9ULZ0 132 aa9.05□□□□□ -0.96
SEMA4D-223ENST00000540475 TRGV2A0A075B6R0 118 aa9.04□□□□□ -0.96
SEMA4D-223ENST00000540475 DIRC3C9JPN6 131 aa9.04□□□□□ -0.96
SEMA4D-223ENST00000540475 SSNA1O43805 119 aa9.04□□□□□ -0.96
SEMA4D-223ENST00000540475 RANP62826 216 aaKnown RBP9.04□□□□□ -0.96
SEMA4D-223ENST00000540475 FFAR4Q5NUL3 377 aa9.04□□□□□ -0.96
SEMA4D-223ENST00000540475 KRTAP1-5Q9BYS1 174 aa9.04□□□□□ -0.96
SEMA4D-223ENST00000540475 WFDC1Q9HC57 220 aa9.04□□□□□ -0.96
SEMA4D-223ENST00000540475 TRGV1A0A0A0MS02 117 aa9.03□□□□□ -0.96
SEMA4D-223ENST00000540475 OR7C2O60412 319 aa9.03□□□□□ -0.96
SEMA4D-223ENST00000540475 IFNA5P01569 189 aa9.03□□□□□ -0.96
SEMA4D-223ENST00000540475 CSN1S1P47710 185 aa9.03□□□□□ -0.96
SEMA4D-223ENST00000540475 TAS2R45P59539 299 aa9.03□□□□□ -0.96
SEMA4D-223ENST00000540475 KHDC3LQ587J8 217 aa9.03□□□□□ -0.96
SEMA4D-223ENST00000540475 TTC32Q5I0X7 151 aa9.03□□□□□ -0.96
SEMA4D-223ENST00000540475 Q6AWC8 147 aa9.03□□□□□ -0.96
SEMA4D-223ENST00000540475 ZNF575Q86XF7 245 aa9.03□□□□□ -0.96
SEMA4D-223ENST00000540475 SCGB1C1Q8TD33 95 aa9.03□□□□□ -0.96
SEMA4D-223ENST00000540475 MBD2Q9UBB5 411 aa9.03□□□□□ -0.96
SEMA4D-223ENST00000540475 RGS13O14921 159 aa9.02□□□□□ -0.97
SEMA4D-223ENST00000540475 UBE2L3P68036 154 aaKnown RBP9.02□□□□□ -0.97
SEMA4D-223ENST00000540475 SLAQ13239 276 aa9.02□□□□□ -0.97
SEMA4D-223ENST00000540475 TDRG1Q3Y452 100 aa9.02□□□□□ -0.97
SEMA4D-223ENST00000540475 IQCF2Q8IXL9 164 aa9.02□□□□□ -0.97
SEMA4D-223ENST00000540475 Q8TAT8 98 aa9.02□□□□□ -0.97
SEMA4D-223ENST00000540475 OTORQ9NRC9 128 aa9.02□□□□□ -0.97
SEMA4D-223ENST00000540475 CRYBA4P53673 196 aa9.01□□□□□ -0.97
SEMA4D-223ENST00000540475 FHL2Q14192 279 aa9.01□□□□□ -0.97
SEMA4D-223ENST00000540475 PQLC2Q6ZP29 291 aa9.01□□□□□ -0.97
SEMA4D-223ENST00000540475 RASL10AQ92737 203 aa9.01□□□□□ -0.97
SEMA4D-223ENST00000540475 SMIM3Q9BZL3 60 aa9.01□□□□□ -0.97
SEMA4D-223ENST00000540475 BATF3Q9NR55 127 aa9.01□□□□□ -0.97
SEMA4D-223ENST00000540475 PRO0255Q9UI72 69 aa9.01□□□□□ -0.97
SEMA4D-223ENST00000540475 CDK2AP2O75956 126 aa9□□□□□ -0.97
SEMA4D-223ENST00000540475 ZNF415Q09FC8 603 aa9□□□□□ -0.97
SEMA4D-223ENST00000540475 ACOT6Q3I5F7 207 aaPredicted RBP9□□□□□ -0.97
SEMA4D-223ENST00000540475 SUN5Q8TC36 379 aa9□□□□□ -0.97
SEMA4D-223ENST00000540475 ARPC5LQ9BPX5 153 aa9□□□□□ -0.97
SEMA4D-223ENST00000540475 SPXQ9BT56 116 aa9□□□□□ -0.97
SEMA4D-223ENST00000540475 MDFICQ9P1T7 246 aa9□□□□□ -0.97
SEMA4D-223ENST00000540475 PGPA6NDG6 321 aa8.99□□□□□ -0.97
SEMA4D-223ENST00000540475 PAX4O43316 350 aa8.99□□□□□ -0.97
SEMA4D-223ENST00000540475 OR10G4Q8NGN3 311 aa8.99□□□□□ -0.97
SEMA4D-223ENST00000540475 OR2G3Q8NGZ4 309 aa8.99□□□□□ -0.97
SEMA4D-223ENST00000540475 MRPL16Q9NX20 251 aaKnown RBP8.99□□□□□ -0.97
SEMA4D-223ENST00000540475 HHLA3Q9XRX5 114 aa8.99□□□□□ -0.97
SEMA4D-223ENST00000540475 Q6ZRN7 208 aaPredicted RBP8.98□□□□□ -0.97
SEMA4D-223ENST00000540475 ALG5Q9Y673 324 aa8.98□□□□□ -0.97
SEMA4D-223ENST00000540475 ICOSQ9Y6W8 199 aa8.98□□□□□ -0.97
SEMA4D-223ENST00000540475 TRGV11A0A075B6L2 103 aa8.97□□□□□ -0.97
SEMA4D-223ENST00000540475 A0A1W2PPV4 95 aa8.97□□□□□ -0.97
SEMA4D-223ENST00000540475 C16orf90A8MZG2 172 aa8.97□□□□□ -0.97
SEMA4D-223ENST00000540475 SIVA1O15304 175 aa8.97□□□□□ -0.97
SEMA4D-223ENST00000540475 EIF3GO75821 320 aaKnown RBP eCLIP8.97□□□□□ -0.97
SEMA4D-223ENST00000540475 STAG3L2P0CL84 134 aa8.97□□□□□ -0.97
SEMA4D-223ENST00000540475 STAG3L3P0CL85 134 aa8.97□□□□□ -0.97
SEMA4D-223ENST00000540475 RAB2AP61019 212 aa8.97□□□□□ -0.97
SEMA4D-223ENST00000540475 MRPL23Q16540 153 aaKnown RBP8.97□□□□□ -0.97
SEMA4D-223ENST00000540475 FAM74A1Q5RGS3 127 aa8.97□□□□□ -0.97
SEMA4D-223ENST00000540475 MUC21Q5SSG8 566 aa8.97□□□□□ -0.97
SEMA4D-223ENST00000540475 LYPD5Q6UWN5 251 aa8.97□□□□□ -0.97
SEMA4D-223ENST00000540475 FAM159AQ6UWV7 190 aa8.97□□□□□ -0.97
SEMA4D-223ENST00000540475 OR10G9Q8NGN4 311 aa8.97□□□□□ -0.97
SEMA4D-223ENST00000540475 OR10G7Q8NGN6 311 aa8.97□□□□□ -0.97
SEMA4D-223ENST00000540475 TVP23CQ96ET8 276 aa8.97□□□□□ -0.97
SEMA4D-223ENST00000540475 AQP10Q96PS8 301 aa8.97□□□□□ -0.97
SEMA4D-223ENST00000540475 PSMG3Q9BT73 122 aaPredicted RBP8.97□□□□□ -0.97
SEMA4D-223ENST00000540475 PTTG1O95997 202 aa8.96□□□□□ -0.98
SEMA4D-223ENST00000540475 CMTM2Q8TAZ6 248 aa8.96□□□□□ -0.98
SEMA4D-223ENST00000540475 HYLS1Q96M11 299 aa8.96□□□□□ -0.98
SEMA4D-223ENST00000540475 TRAV21A0A0B4J279 112 aa8.95□□□□□ -0.98
SEMA4D-223ENST00000540475 IGHV3-16A0A0C4DH30 117 aa8.95□□□□□ -0.98
SEMA4D-223ENST00000540475 SERTM2A0A1B0GWG4 89 aa8.95□□□□□ -0.98
SEMA4D-223ENST00000540475 IGHV3-53P01767 116 aa8.95□□□□□ -0.98
SEMA4D-223ENST00000540475 SERF2P84101 59 aa8.95□□□□□ -0.98
SEMA4D-223ENST00000540475 TMEM183BQ1AE95 376 aa8.95□□□□□ -0.98
SEMA4D-223ENST00000540475 NEGR1Q7Z3B1 354 aa8.95□□□□□ -0.98
SEMA4D-223ENST00000540475 TMEM183AQ8IXX5 376 aa8.95□□□□□ -0.98
SEMA4D-223ENST00000540475 ASB13Q8WXK3 278 aa8.95□□□□□ -0.98
SEMA4D-223ENST00000540475 ZNF479Q96JC4 524 aa8.95□□□□□ -0.98
SEMA4D-223ENST00000540475 C8orf49Q96NF6 230 aa8.95□□□□□ -0.98
SEMA4D-223ENST00000540475 KRTAP4-5Q9BYR2 181 aa8.95□□□□□ -0.98
SEMA4D-223ENST00000540475 DNAH8Q96JB1 4490 aa8.94□□□□□ -0.98
SEMA4D-223ENST00000540475 TRAV4A0A0B4J268 109 aa8.94□□□□□ -0.98
SEMA4D-223ENST00000540475 K7EP13 123 aa8.94□□□□□ -0.98
SEMA4D-223ENST00000540475 K7EQD1 137 aa8.94□□□□□ -0.98
SEMA4D-223ENST00000540475 GNRH2O43555 120 aa8.94□□□□□ -0.98
SEMA4D-223ENST00000540475 NXPH4O95158 308 aa8.94□□□□□ -0.98
SEMA4D-223ENST00000540475 ARL14EPLP0DKL9 152 aa8.94□□□□□ -0.98
SEMA4D-223ENST00000540475 LINC00315P59091 139 aa8.94□□□□□ -0.98
SEMA4D-223ENST00000540475 GOLT1AQ6ZVE7 132 aa8.94□□□□□ -0.98
SEMA4D-223ENST00000540475 SPATA12Q7Z6I5 190 aa8.94□□□□□ -0.98
SEMA4D-223ENST00000540475 TRAV8-1A0A0A6YYK1 113 aa8.93□□□□□ -0.98
SEMA4D-223ENST00000540475 TRGV4A0A0C4DH28 118 aa8.93□□□□□ -0.98
SEMA4D-223ENST00000540475 M0R2P5 195 aa8.93□□□□□ -0.98
SEMA4D-223ENST00000540475 MBP02144 154 aa8.93□□□□□ -0.98
SEMA4D-223ENST00000540475 ORM1P02763 201 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 94 ms