RNA–Protein interactions for RNA: ENST00000540022.5

TNFRSF1A-213, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1A, Length 1,527 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-213ENST00000540022 LINC00322Q6ZN03 302 aaPredicted RBP13.85□□□□□ -0.19
TNFRSF1A-213ENST00000540022 TRAV12-2A0A075B6T6 113 aa13.85□□□□□ -0.19
TNFRSF1A-213ENST00000540022 F8W036 122 aa13.85□□□□□ -0.19
TNFRSF1A-213ENST00000540022 CRXO43186 299 aaPredicted RBP13.85□□□□□ -0.19
TNFRSF1A-213ENST00000540022 GPX1P07203 203 aa13.85□□□□□ -0.19
TNFRSF1A-213ENST00000540022 GIG44P09565 113 aaPredicted RBP13.85□□□□□ -0.19
TNFRSF1A-213ENST00000540022 NUTF2P61970 127 aaKnown RBP13.85□□□□□ -0.19
TNFRSF1A-213ENST00000540022 TMEM241Q24JQ0 296 aa13.85□□□□□ -0.19
TNFRSF1A-213ENST00000540022 COX8CQ7Z4L0 72 aa13.85□□□□□ -0.19
TNFRSF1A-213ENST00000540022 SMIM12Q96EX1 92 aa13.85□□□□□ -0.19
TNFRSF1A-213ENST00000540022 ZC2HC1AQ96GY0 325 aa13.85□□□□□ -0.19
TNFRSF1A-213ENST00000540022 SEC11CQ9BY50 192 aa13.85□□□□□ -0.19
TNFRSF1A-213ENST00000540022 NAT8Q9UHE5 227 aa13.85□□□□□ -0.19
TNFRSF1A-213ENST00000540022 ZNF80P51504 273 aaPredicted RBP13.84□□□□□ -0.19
TNFRSF1A-213ENST00000540022 BTN1A1Q13410 526 aa13.84□□□□□ -0.19
TNFRSF1A-213ENST00000540022 SMUG1Q53HV7 270 aa13.84□□□□□ -0.19
TNFRSF1A-213ENST00000540022 MORN3Q6PF18 240 aaPredicted RBP13.84□□□□□ -0.19
TNFRSF1A-213ENST00000540022 CSTL1Q9H114 145 aa13.84□□□□□ -0.19
TNFRSF1A-213ENST00000540022 XCL2Q9UBD3 114 aa13.84□□□□□ -0.19
TNFRSF1A-213ENST00000540022 K7EN84 100 aa13.83□□□□□ -0.2
TNFRSF1A-213ENST00000540022 GCGP01275 180 aa13.83□□□□□ -0.2
TNFRSF1A-213ENST00000540022 MGST1P10620 155 aaKnown RBP13.83□□□□□ -0.2
TNFRSF1A-213ENST00000540022 RNASE4P34096 147 aaKnown RBP13.83□□□□□ -0.2
TNFRSF1A-213ENST00000540022 CRIP1P50238 77 aa13.83□□□□□ -0.2
TNFRSF1A-213ENST00000540022 GFI1BQ5VTD9 330 aa13.83□□□□□ -0.2
TNFRSF1A-213ENST00000540022 Q6ZQT7 251 aa13.83□□□□□ -0.2
TNFRSF1A-213ENST00000540022 LINC01551Q86U37 167 aa13.83□□□□□ -0.2
TNFRSF1A-213ENST00000540022 NIPSNAP3BQ9BS92 247 aa13.83□□□□□ -0.2
TNFRSF1A-213ENST00000540022 SDF2L1Q9HCN8 221 aa13.83□□□□□ -0.2
TNFRSF1A-213ENST00000540022 LY96Q9Y6Y9 160 aa13.83□□□□□ -0.2
TNFRSF1A-213ENST00000540022 RPL23P62829 140 aaKnown RBP13.82□□□□□ -0.2
TNFRSF1A-213ENST00000540022 OR5I1Q13606 314 aa13.82□□□□□ -0.2
TNFRSF1A-213ENST00000540022 C10orf91Q5T1B1 145 aa13.82□□□□□ -0.2
TNFRSF1A-213ENST00000540022 COL7A1Q02388 2944 aa13.82□□□□□ -0.2
TNFRSF1A-213ENST00000540022 KIR2DL5BA0A0G2JN68 375 aa13.81□□□□□ -0.2
TNFRSF1A-213ENST00000540022 KIR2DL5BA0A0G2JPC4 375 aa13.81□□□□□ -0.2
TNFRSF1A-213ENST00000540022 C7orf71A4D174 169 aa13.81□□□□□ -0.2
TNFRSF1A-213ENST00000540022 CA1P00915 261 aaPredicted RBP13.81□□□□□ -0.2
TNFRSF1A-213ENST00000540022 AMBPP02760 352 aa13.81□□□□□ -0.2
TNFRSF1A-213ENST00000540022 FRMD6-AS1P0C7T7 363 aa13.81□□□□□ -0.2
TNFRSF1A-213ENST00000540022 DEFB121Q5J5C9 76 aa13.81□□□□□ -0.2
TNFRSF1A-213ENST00000540022 PRR27Q6MZM9 219 aa13.81□□□□□ -0.2
TNFRSF1A-213ENST00000540022 KIR2DL5AQ8N109 375 aa13.81□□□□□ -0.2
TNFRSF1A-213ENST00000540022 KIR2DL5BQ8NHK3 375 aa13.81□□□□□ -0.2
TNFRSF1A-213ENST00000540022 TRAV12-3A0A0B4J271 114 aa13.8□□□□□ -0.2
TNFRSF1A-213ENST00000540022 RBMY1A1P0DJD3 496 aaKnown RBP13.8□□□□□ -0.2
TNFRSF1A-213ENST00000540022 RBMY1CP0DJD4 496 aa13.8□□□□□ -0.2
TNFRSF1A-213ENST00000540022 RBMY1FQ15415 496 aaKnown RBP13.8□□□□□ -0.2
TNFRSF1A-213ENST00000540022 CARHSP1Q9Y2V2 147 aaKnown RBP13.8□□□□□ -0.2
TNFRSF1A-213ENST00000540022 KRBOX1C9JBD0 128 aa13.8□□□□□ -0.2
TNFRSF1A-213ENST00000540022 ZNF324O75467 553 aaPredicted RBP13.8□□□□□ -0.2
TNFRSF1A-213ENST00000540022 APOC4P55056 127 aa13.8□□□□□ -0.2
TNFRSF1A-213ENST00000540022 ADIRFQ15847 76 aa13.8□□□□□ -0.2
TNFRSF1A-213ENST00000540022 Q6AWC8 147 aa13.8□□□□□ -0.2
TNFRSF1A-213ENST00000540022 C1QTNF4Q9BXJ3 329 aa13.8□□□□□ -0.2
TNFRSF1A-213ENST00000540022 PFN1P07737 140 aaKnown RBP13.79□□□□□ -0.2
TNFRSF1A-213ENST00000540022 CSNK1G2-AS1Q8NCQ2 148 aa13.79□□□□□ -0.2
TNFRSF1A-213ENST00000540022 FABP5P3A8MUU1 101 aa13.78□□□□□ -0.2
TNFRSF1A-213ENST00000540022 SH2D1AO60880 128 aa13.78□□□□□ -0.2
TNFRSF1A-213ENST00000540022 INSP01308 110 aa13.78□□□□□ -0.2
TNFRSF1A-213ENST00000540022 C1orf158Q8N1D5 194 aa13.78□□□□□ -0.2
TNFRSF1A-213ENST00000540022 TRAV21A0A0B4J279 112 aa13.77□□□□□ -0.21
TNFRSF1A-213ENST00000540022 FAM162BQ5T6X4 162 aa13.77□□□□□ -0.21
TNFRSF1A-213ENST00000540022 ISOC2Q96AB3 205 aa13.77□□□□□ -0.21
TNFRSF1A-213ENST00000540022 BIN3Q9NQY0 253 aa13.77□□□□□ -0.21
TNFRSF1A-213ENST00000540022 C11orf21Q9P2W6 132 aa13.77□□□□□ -0.21
TNFRSF1A-213ENST00000540022 C19orf71A6NCJ1 209 aa13.76□□□□□ -0.21
TNFRSF1A-213ENST00000540022 PNRC1Q12796 327 aaPredicted RBP13.76□□□□□ -0.21
TNFRSF1A-213ENST00000540022 RNASE7Q9H1E1 156 aaKnown RBP13.76□□□□□ -0.21
TNFRSF1A-213ENST00000540022 UBE2CO00762 179 aa13.75□□□□□ -0.21
TNFRSF1A-213ENST00000540022 C20orf144Q9BQM9 153 aa13.75□□□□□ -0.21
TNFRSF1A-213ENST00000540022 APOC3P02656 99 aa13.74□□□□□ -0.21
TNFRSF1A-213ENST00000540022 MUC21Q5SSG8 566 aa13.74□□□□□ -0.21
TNFRSF1A-213ENST00000540022 NUDT10Q8NFP7 164 aa13.74□□□□□ -0.21
TNFRSF1A-213ENST00000540022 NUDT11Q96G61 164 aa13.74□□□□□ -0.21
TNFRSF1A-213ENST00000540022 IGHV3OR16-12A0A075B7B8 117 aa13.74□□□□□ -0.21
TNFRSF1A-213ENST00000540022 ERVFC1-1P60608 527 aa13.74□□□□□ -0.21
TNFRSF1A-213ENST00000540022 DEFB135Q30KP9 77 aa13.74□□□□□ -0.21
TNFRSF1A-213ENST00000540022 DAZAP1Q96EP5 407 aaKnown RBP13.74□□□□□ -0.21
TNFRSF1A-213ENST00000540022 H7BYZ3 331 aa13.73□□□□□ -0.21
TNFRSF1A-213ENST00000540022 M0R036 132 aa13.73□□□□□ -0.21
TNFRSF1A-213ENST00000540022 ANXA2RQ3ZCQ2 193 aa13.73□□□□□ -0.21
TNFRSF1A-213ENST00000540022 IBA57Q5T440 356 aaKnown RBP13.73□□□□□ -0.21
TNFRSF1A-213ENST00000540022 FAM231DQ6ZW35 169 aa13.73□□□□□ -0.21
TNFRSF1A-213ENST00000540022 SFRP2Q96HF1 295 aa13.73□□□□□ -0.21
TNFRSF1A-213ENST00000540022 LINC01587Q99440 93 aa13.73□□□□□ -0.21
TNFRSF1A-213ENST00000540022 TMEM208Q9BTX3 173 aa13.73□□□□□ -0.21
TNFRSF1A-213ENST00000540022 NAGKQ9UJ70 344 aa13.73□□□□□ -0.21
TNFRSF1A-213ENST00000540022 GOLT1BQ9Y3E0 138 aa13.73□□□□□ -0.21
TNFRSF1A-213ENST00000540022 IGKV3D-20A0A0C4DH25 116 aa13.72□□□□□ -0.21
TNFRSF1A-213ENST00000540022 ORM1P02763 201 aa13.72□□□□□ -0.21
TNFRSF1A-213ENST00000540022 PRM2P04554 102 aa13.72□□□□□ -0.21
TNFRSF1A-213ENST00000540022 RPL19P84098 196 aaKnown RBP13.72□□□□□ -0.21
TNFRSF1A-213ENST00000540022 ZNF705AQ6ZN79 300 aaPredicted RBP13.72□□□□□ -0.21
TNFRSF1A-213ENST00000540022 Q6ZWC4 215 aa13.72□□□□□ -0.21
TNFRSF1A-213ENST00000540022 SBSPONQ8IVN8 264 aa13.72□□□□□ -0.21
TNFRSF1A-213ENST00000540022 OSTCQ9NRP0 149 aa13.72□□□□□ -0.21
TNFRSF1A-213ENST00000540022 ATP6V1G1O75348 118 aa13.71□□□□□ -0.21
TNFRSF1A-213ENST00000540022 P01737 135 aa13.71□□□□□ -0.21
TNFRSF1A-213ENST00000540022 FAM159AQ6UWV7 190 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms