RNA–Protein interactions for RNA: ENST00000539925.5

LTBR-207, Transcript of lymphotoxin beta receptor, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LTBR, Length 1,665 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-207ENST00000539925 SRIP30626 198 aa12.94□□□□□ -0.34
LTBR-207ENST00000539925 PDZD11Q5EBL8 140 aa12.94□□□□□ -0.34
LTBR-207ENST00000539925 DNLZQ5SXM8 178 aa12.94□□□□□ -0.34
LTBR-207ENST00000539925 GDF5OSQ5U4N7 250 aa12.94□□□□□ -0.34
LTBR-207ENST00000539925 OR10D4PQ8NGN7 298 aa12.94□□□□□ -0.34
LTBR-207ENST00000539925 OR9G4Q8NGQ1 327 aa12.94□□□□□ -0.34
LTBR-207ENST00000539925 SONP18583 2426 aaKnown RBP12.94□□□□□ -0.34
LTBR-207ENST00000539925 CSMD1Q96PZ7 3565 aa12.94□□□□□ -0.34
LTBR-207ENST00000539925 AMBPP02760 352 aa12.93□□□□□ -0.34
LTBR-207ENST00000539925 LYZL1Q6UWQ5 148 aa12.93□□□□□ -0.34
LTBR-207ENST00000539925 ZNF493Q6ZR52 646 aa12.93□□□□□ -0.34
LTBR-207ENST00000539925 APRG1Q8IVJ8 170 aa12.93□□□□□ -0.34
LTBR-207ENST00000539925 FAM19A4Q96LR4 140 aa12.93□□□□□ -0.34
LTBR-207ENST00000539925 CNFNQ9BYD5 112 aa12.93□□□□□ -0.34
LTBR-207ENST00000539925 ITPR2Q14571 2701 aa12.93□□□□□ -0.34
LTBR-207ENST00000539925 GRIFINA4D1Z8 144 aa12.93□□□□□ -0.34
LTBR-207ENST00000539925 LY6G6DO95868 133 aa12.93□□□□□ -0.34
LTBR-207ENST00000539925 ARMS2P0C7Q2 107 aa12.93□□□□□ -0.34
LTBR-207ENST00000539925 LINC01006Q8NI28 216 aa12.93□□□□□ -0.34
LTBR-207ENST00000539925 TSSC4Q9Y5U2 329 aaPredicted RBP12.93□□□□□ -0.34
LTBR-207ENST00000539925 MYO9AB2RTY4 2548 aa12.92□□□□□ -0.34
LTBR-207ENST00000539925 IGKV3-7A0A075B6H7 116 aa12.92□□□□□ -0.34
LTBR-207ENST00000539925 DUSP14O95147 198 aaKnown RBP12.92□□□□□ -0.34
LTBR-207ENST00000539925 PRB4P10163 310 aaPredicted RBP12.92□□□□□ -0.34
LTBR-207ENST00000539925 KIAA1644Q3SXP7 199 aa12.92□□□□□ -0.34
LTBR-207ENST00000539925 ALKBH7Q9BT30 221 aaPredicted RBP12.92□□□□□ -0.34
LTBR-207ENST00000539925 TPPP3Q9BW30 176 aa12.92□□□□□ -0.34
LTBR-207ENST00000539925 FASNP49327 2511 aaKnown RBP12.91□□□□□ -0.34
LTBR-207ENST00000539925 TMSB15BA0A087X1C1 80 aa12.91□□□□□ -0.34
LTBR-207ENST00000539925 SLURP1P55000 103 aa12.91□□□□□ -0.34
LTBR-207ENST00000539925 EBLN2Q6P2I7 272 aa12.91□□□□□ -0.34
LTBR-207ENST00000539925 ZFAND2AQ8N6M9 145 aa12.91□□□□□ -0.34
LTBR-207ENST00000539925 MXRA5Q9NR99 2828 aa12.9□□□□□ -0.34
LTBR-207ENST00000539925 HIVEP2P31629 2446 aa12.9□□□□□ -0.34
LTBR-207ENST00000539925 LOC102724200A0A096LPH7 203 aaPredicted RBP12.9□□□□□ -0.34
LTBR-207ENST00000539925 GPX1P07203 203 aa12.9□□□□□ -0.34
LTBR-207ENST00000539925 LEPP41159 167 aa12.9□□□□□ -0.34
LTBR-207ENST00000539925 WFDC3Q8IUB2 231 aa12.9□□□□□ -0.34
LTBR-207ENST00000539925 SSBP4Q9BWG4 385 aaPredicted RBP12.9□□□□□ -0.34
LTBR-207ENST00000539925 GCN1Q92616 2671 aaKnown RBP12.9□□□□□ -0.34
LTBR-207ENST00000539925 SERF1AO75920 110 aa12.89□□□□□ -0.35
LTBR-207ENST00000539925 FHL3Q13643 280 aa12.89□□□□□ -0.35
LTBR-207ENST00000539925 TMEM256Q8N2U0 113 aa12.89□□□□□ -0.35
LTBR-207ENST00000539925 C18orf32Q8TCD1 76 aa12.89□□□□□ -0.35
LTBR-207ENST00000539925 NBPF19A0A087WUL8 3843 aa12.89□□□□□ -0.35
LTBR-207ENST00000539925 TRAV25A0A0B4J276 109 aa12.89□□□□□ -0.35
LTBR-207ENST00000539925 MED14OSP0DP75 135 aa12.89□□□□□ -0.35
LTBR-207ENST00000539925 TSPOP30536 169 aa12.89□□□□□ -0.35
LTBR-207ENST00000539925 CACNG7P62955 275 aa12.89□□□□□ -0.35
LTBR-207ENST00000539925 DEFB136Q30KP8 78 aa12.89□□□□□ -0.35
LTBR-207ENST00000539925 C18orf65Q6ZTR6 163 aa12.89□□□□□ -0.35
LTBR-207ENST00000539925 DYNLRB2Q8TF09 96 aa12.89□□□□□ -0.35
LTBR-207ENST00000539925 SIGLEC8Q9NYZ4 499 aa12.89□□□□□ -0.35
LTBR-207ENST00000539925 TP53TG3Q9ULZ0 132 aa12.89□□□□□ -0.35
LTBR-207ENST00000539925 IGKV3D-20A0A0C4DH25 116 aa12.88□□□□□ -0.35
LTBR-207ENST00000539925 OR5AL1P0C617 328 aa12.88□□□□□ -0.35
LTBR-207ENST00000539925 EDN2P20800 178 aa12.88□□□□□ -0.35
LTBR-207ENST00000539925 PSMG4Q5JS54 123 aa12.88□□□□□ -0.35
LTBR-207ENST00000539925 FOXI2Q6ZQN5 318 aa12.88□□□□□ -0.35
LTBR-207ENST00000539925 KCNS1Q96KK3 526 aa12.88□□□□□ -0.35
LTBR-207ENST00000539925 SAMD10Q9BYL1 202 aa12.88□□□□□ -0.35
LTBR-207ENST00000539925 ACANP16112 2415 aa12.88□□□□□ -0.35
LTBR-207ENST00000539925 A0A0J9YX75 114 aa12.87□□□□□ -0.35
LTBR-207ENST00000539925 CCL24O00175 119 aa12.87□□□□□ -0.35
LTBR-207ENST00000539925 CSN3P07498 182 aa12.87□□□□□ -0.35
LTBR-207ENST00000539925 ZNF688P0C7X2 276 aa12.87□□□□□ -0.35
LTBR-207ENST00000539925 ZNF705DP0CH99 300 aaPredicted RBP12.87□□□□□ -0.35
LTBR-207ENST00000539925 ZNF705BP0CI00 300 aaPredicted RBP12.87□□□□□ -0.35
LTBR-207ENST00000539925 DLX4Q92988 240 aaPredicted RBP12.87□□□□□ -0.35
LTBR-207ENST00000539925 KLLNB2CW77 178 aa12.86□□□□□ -0.35
LTBR-207ENST00000539925 TFPI2P48307 235 aa12.86□□□□□ -0.35
LTBR-207ENST00000539925 TWIST1Q15672 202 aa12.86□□□□□ -0.35
LTBR-207ENST00000539925 ADAMTSL5Q6ZMM2 481 aa12.86□□□□□ -0.35
LTBR-207ENST00000539925 SMIM15Q7Z3B0 74 aa12.86□□□□□ -0.35
LTBR-207ENST00000539925 TMEM191AQ9H0A3 160 aa12.86□□□□□ -0.35
LTBR-207ENST00000539925 HECTD1Q9ULT8 2610 aa12.86□□□□□ -0.35
LTBR-207ENST00000539925 SNAI2O43623 268 aa12.86□□□□□ -0.35
LTBR-207ENST00000539925 CD28P10747 220 aa12.86□□□□□ -0.35
LTBR-207ENST00000539925 JOSD1Q15040 202 aaPredicted RBP12.86□□□□□ -0.35
LTBR-207ENST00000539925 FAM104BQ5XKR9 115 aa12.86□□□□□ -0.35
LTBR-207ENST00000539925 RAX2Q96IS3 184 aa12.86□□□□□ -0.35
LTBR-207ENST00000539925 RNF114Q9Y508 228 aa12.86□□□□□ -0.35
LTBR-207ENST00000539925 IGHV4-4A0A075B6R2 117 aa12.85□□□□□ -0.35
LTBR-207ENST00000539925 A0A1B0GUS0 222 aa12.85□□□□□ -0.35
LTBR-207ENST00000539925 F6UB75 175 aa12.85□□□□□ -0.35
LTBR-207ENST00000539925 TCF21O43680 179 aa12.85□□□□□ -0.35
LTBR-207ENST00000539925 PPBPP02775 128 aa12.85□□□□□ -0.35
LTBR-207ENST00000539925 NTF3P20783 257 aa12.85□□□□□ -0.35
LTBR-207ENST00000539925 PYY3Q5JQD4 70 aa12.85□□□□□ -0.35
LTBR-207ENST00000539925 CHCHD1Q96BP2 118 aaKnown RBP12.85□□□□□ -0.35
LTBR-207ENST00000539925 SPAG8Q99932 426 aaPredicted RBP12.85□□□□□ -0.35
LTBR-207ENST00000539925 SMR3AQ99954 134 aa12.85□□□□□ -0.35
LTBR-207ENST00000539925 C11orf21Q9P2W6 132 aa12.85□□□□□ -0.35
LTBR-207ENST00000539925 OR4C46A6NHA9 309 aa12.84□□□□□ -0.35
LTBR-207ENST00000539925 ZNF324O75467 553 aaPredicted RBP12.84□□□□□ -0.35
LTBR-207ENST00000539925 LINC00310P59036 64 aa12.84□□□□□ -0.35
LTBR-207ENST00000539925 ZNF575Q86XF7 245 aa12.84□□□□□ -0.35
LTBR-207ENST00000539925 RAB4AP20338 218 aa12.83□□□□□ -0.35
LTBR-207ENST00000539925 PMCHP20382 165 aa12.83□□□□□ -0.35
LTBR-207ENST00000539925 RNASE4P34096 147 aaKnown RBP12.83□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 235.5 ms