RNA–Protein interactions for RNA: ENST00000539827.5

HOMER3-204, Transcript of homer scaffold protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HOMER3, Length 1,979 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-204ENST00000539827 DPF1Q92782 380 aa16.94■□□□□ 0.3
HOMER3-204ENST00000539827 SSBP4Q9BWG4 385 aaPredicted RBP16.94■□□□□ 0.3
HOMER3-204ENST00000539827 F6UB75 175 aa16.93■□□□□ 0.3
HOMER3-204ENST00000539827 AMBPP02760 352 aa16.93■□□□□ 0.3
HOMER3-204ENST00000539827 HBBP68871 147 aa16.93■□□□□ 0.3
HOMER3-204ENST00000539827 SLAQ13239 276 aa16.93■□□□□ 0.3
HOMER3-204ENST00000539827 TMEM18Q96B42 140 aa16.93■□□□□ 0.3
HOMER3-204ENST00000539827 TPPP3Q9BW30 176 aa16.93■□□□□ 0.3
HOMER3-204ENST00000539827 FABP5P3A8MUU1 101 aa16.93■□□□□ 0.3
HOMER3-204ENST00000539827 CRISP2P16562 243 aa16.93■□□□□ 0.3
HOMER3-204ENST00000539827 OR10J6PQ8NGY7 276 aa16.93■□□□□ 0.3
HOMER3-204ENST00000539827 DCANP1Q8TF63 244 aa16.93■□□□□ 0.3
HOMER3-204ENST00000539827 MS4A6AQ9H2W1 248 aa16.93■□□□□ 0.3
HOMER3-204ENST00000539827 ORM1P02763 201 aa16.91■□□□□ 0.3
HOMER3-204ENST00000539827 ID1P41134 155 aa16.91■□□□□ 0.3
HOMER3-204ENST00000539827 HILS1P60008 231 aa16.91■□□□□ 0.3
HOMER3-204ENST00000539827 HIST1H1AQ02539 215 aaPredicted RBP16.91■□□□□ 0.3
HOMER3-204ENST00000539827 LINC00587B1AMM8 73 aa16.91■□□□□ 0.3
HOMER3-204ENST00000539827 ARMS2P0C7Q2 107 aa16.91■□□□□ 0.3
HOMER3-204ENST00000539827 CD28P10747 220 aa16.91■□□□□ 0.3
HOMER3-204ENST00000539827 ADAMTSL5Q6ZMM2 481 aa16.91■□□□□ 0.3
HOMER3-204ENST00000539827 TMEM256Q8N2U0 113 aa16.91■□□□□ 0.3
HOMER3-204ENST00000539827 OR8A1Q8NGG7 326 aa16.9■□□□□ 0.3
HOMER3-204ENST00000539827 LINC01006Q8NI28 216 aa16.9■□□□□ 0.3
HOMER3-204ENST00000539827 LINC00477Q96M19 166 aa16.9■□□□□ 0.3
HOMER3-204ENST00000539827 C16orf95Q9H693 158 aa16.9■□□□□ 0.3
HOMER3-204ENST00000539827 PPP1R14DQ9NXH3 145 aa16.9■□□□□ 0.3
HOMER3-204ENST00000539827 HAX1O00165 279 aa16.89■□□□□ 0.3
HOMER3-204ENST00000539827 JOSD1Q15040 202 aaPredicted RBP16.89■□□□□ 0.3
HOMER3-204ENST00000539827 TP53TG3Q9ULZ0 132 aa16.89■□□□□ 0.3
HOMER3-204ENST00000539827 A0A1B0GUT8 65 aa16.89■□□□□ 0.29
HOMER3-204ENST00000539827 A0A1W2PRX2 142 aa16.89■□□□□ 0.29
HOMER3-204ENST00000539827 F2Z2F3 143 aa16.89■□□□□ 0.29
HOMER3-204ENST00000539827 J3KRW8 73 aa16.89■□□□□ 0.29
HOMER3-204ENST00000539827 SRIP30626 198 aa16.89■□□□□ 0.29
HOMER3-204ENST00000539827 LYZL1Q6UWQ5 148 aa16.89■□□□□ 0.29
HOMER3-204ENST00000539827 M0QZ24 198 aa16.88■□□□□ 0.29
HOMER3-204ENST00000539827 NUPR1O60356 82 aa16.88■□□□□ 0.29
HOMER3-204ENST00000539827 RPS20P60866 119 aaKnown RBP16.88■□□□□ 0.29
HOMER3-204ENST00000539827 SSTP61278 116 aa16.88■□□□□ 0.29
HOMER3-204ENST00000539827 PRR9Q5T870 116 aa16.88■□□□□ 0.29
HOMER3-204ENST00000539827 Q6ZQT7 251 aa16.88■□□□□ 0.29
HOMER3-204ENST00000539827 ZNF575Q86XF7 245 aa16.88■□□□□ 0.29
HOMER3-204ENST00000539827 RIGQ13278 110 aa16.88■□□□□ 0.29
HOMER3-204ENST00000539827 DLX4Q92988 240 aaPredicted RBP16.88■□□□□ 0.29
HOMER3-204ENST00000539827 C11orf21Q9P2W6 132 aa16.88■□□□□ 0.29
HOMER3-204ENST00000539827 ZNF688P0C7X2 276 aa16.87■□□□□ 0.29
HOMER3-204ENST00000539827 SRSF2Q01130 221 aaKnown RBP16.87■□□□□ 0.29
HOMER3-204ENST00000539827 Q6AWC8 147 aa16.87■□□□□ 0.29
HOMER3-204ENST00000539827 MUC21A0A0G2JKD1 596 aa16.86■□□□□ 0.29
HOMER3-204ENST00000539827 MUC21A0A140T8X8 626 aa16.86■□□□□ 0.29
HOMER3-204ENST00000539827 K7EQG2 157 aa16.86■□□□□ 0.29
HOMER3-204ENST00000539827 MUC21Q5SSG8 566 aa16.86■□□□□ 0.29
HOMER3-204ENST00000539827 SAMD13Q5VXD3 122 aa16.86■□□□□ 0.29
HOMER3-204ENST00000539827 LENEPQ9Y5L5 61 aa16.86■□□□□ 0.29
HOMER3-204ENST00000539827 LINC01559Q495D7 138 aa16.86■□□□□ 0.29
HOMER3-204ENST00000539827 BAGE3Q86Y29 109 aa16.86■□□□□ 0.29
HOMER3-204ENST00000539827 OR9G4Q8NGQ1 327 aa16.86■□□□□ 0.29
HOMER3-204ENST00000539827 BORCS7Q96B45 105 aa16.86■□□□□ 0.29
HOMER3-204ENST00000539827 Q0VG73 95 aa16.85■□□□□ 0.29
HOMER3-204ENST00000539827 PSMG4Q5JS54 123 aa16.85■□□□□ 0.29
HOMER3-204ENST00000539827 PEMTQ9UBM1 199 aa16.85■□□□□ 0.29
HOMER3-204ENST00000539827 IGKV3D-20A0A0C4DH25 116 aa16.84■□□□□ 0.29
HOMER3-204ENST00000539827 INAFM1C9JVW0 142 aa16.84■□□□□ 0.29
HOMER3-204ENST00000539827 ZFAND2AQ8N6M9 145 aa16.84■□□□□ 0.29
HOMER3-204ENST00000539827 FER1L6-AS1Q8NA97 138 aa16.84■□□□□ 0.29
HOMER3-204ENST00000539827 RAX2Q96IS3 184 aa16.84■□□□□ 0.29
HOMER3-204ENST00000539827 CITED2Q99967 270 aaPredicted RBP16.84■□□□□ 0.29
HOMER3-204ENST00000539827 MTORP42345 2549 aa16.84■□□□□ 0.29
HOMER3-204ENST00000539827 HIVEP2P31629 2446 aa16.84■□□□□ 0.29
HOMER3-204ENST00000539827 CUBNO60494 3623 aa16.84■□□□□ 0.29
HOMER3-204ENST00000539827 CD33P20138 364 aa16.84■□□□□ 0.29
HOMER3-204ENST00000539827 LINC00310P59036 64 aa16.84■□□□□ 0.29
HOMER3-204ENST00000539827 OTOGQ6ZRI0 2925 aa16.83■□□□□ 0.28
HOMER3-204ENST00000539827 SERF1AO75920 110 aa16.83■□□□□ 0.28
HOMER3-204ENST00000539827 IGLC6P0CF74 106 aa16.83■□□□□ 0.28
HOMER3-204ENST00000539827 CDPF1Q6NVV7 123 aa16.83■□□□□ 0.28
HOMER3-204ENST00000539827 WFDC12Q8WWY7 111 aa16.83■□□□□ 0.28
HOMER3-204ENST00000539827 FAM19A4Q96LR4 140 aa16.83■□□□□ 0.28
HOMER3-204ENST00000539827 TSTD3H0UI37 97 aa16.82■□□□□ 0.28
HOMER3-204ENST00000539827 PKIAP61925 76 aa16.82■□□□□ 0.28
HOMER3-204ENST00000539827 IQCJQ1A5X6 159 aa16.82■□□□□ 0.28
HOMER3-204ENST00000539827 CSN3P07498 182 aa16.82■□□□□ 0.28
HOMER3-204ENST00000539827 SNRPD3P62318 126 aaKnown RBP16.82■□□□□ 0.28
HOMER3-204ENST00000539827 JMJD8Q96S16 334 aa16.82■□□□□ 0.28
HOMER3-204ENST00000539827 ALKBH7Q9BT30 221 aaPredicted RBP16.82■□□□□ 0.28
HOMER3-204ENST00000539827 MAST4O15021 2626 aa16.81■□□□□ 0.28
HOMER3-204ENST00000539827 KIR3DS1Q14943 382 aa16.81■□□□□ 0.28
HOMER3-204ENST00000539827 OR10J3Q5JRS4 329 aa16.81■□□□□ 0.28
HOMER3-204ENST00000539827 GPX1P07203 203 aa16.8■□□□□ 0.28
HOMER3-204ENST00000539827 ESDP10768 282 aa16.8■□□□□ 0.28
HOMER3-204ENST00000539827 RNASE4P34096 147 aaKnown RBP16.8■□□□□ 0.28
HOMER3-204ENST00000539827 TSSC4Q9Y5U2 329 aaPredicted RBP16.8■□□□□ 0.28
HOMER3-204ENST00000539827 A0A1B0GW15 77 aa16.8■□□□□ 0.28
HOMER3-204ENST00000539827 CTRLP40313 264 aa16.8■□□□□ 0.28
HOMER3-204ENST00000539827 PAFAH1B2P68402 229 aa16.8■□□□□ 0.28
HOMER3-204ENST00000539827 RNF114Q9Y508 228 aa16.8■□□□□ 0.28
HOMER3-204ENST00000539827 CCL24O00175 119 aa16.79■□□□□ 0.28
HOMER3-204ENST00000539827 NDUFA7O95182 113 aa16.79■□□□□ 0.28
HOMER3-204ENST00000539827 GATD1Q8NB37 220 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms