RNA–Protein interactions for RNA: ENST00000539739.5

DDB1-216, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 5

Gene DDB1, Length 1,624 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-216ENST00000539739 HMGB3O15347 200 aaKnown RBP11.56□□□□□ -0.56
DDB1-216ENST00000539739 PYYP10082 97 aa11.56□□□□□ -0.56
DDB1-216ENST00000539739 ID1P41134 155 aa11.56□□□□□ -0.56
DDB1-216ENST00000539739 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.56□□□□□ -0.56
DDB1-216ENST00000539739 GTSCR1Q86UQ5 136 aa11.56□□□□□ -0.56
DDB1-216ENST00000539739 DCANP1Q8TF63 244 aa11.56□□□□□ -0.56
DDB1-216ENST00000539739 C16orf92Q96LL3 132 aa11.56□□□□□ -0.56
DDB1-216ENST00000539739 LAMTOR2Q9Y2Q5 125 aa11.56□□□□□ -0.56
DDB1-216ENST00000539739 K7EQG2 157 aa11.55□□□□□ -0.56
DDB1-216ENST00000539739 CXorf1O96002 111 aa11.55□□□□□ -0.56
DDB1-216ENST00000539739 IGLC2P0DOY2 106 aa11.55□□□□□ -0.56
DDB1-216ENST00000539739 CMC4P56277 68 aaPredicted RBP11.55□□□□□ -0.56
DDB1-216ENST00000539739 SNRPD3P62318 126 aaKnown RBP11.55□□□□□ -0.56
DDB1-216ENST00000539739 BEAN1Q3B7T3 259 aa11.55□□□□□ -0.56
DDB1-216ENST00000539739 LCN15Q6UWW0 184 aa11.55□□□□□ -0.56
DDB1-216ENST00000539739 OR10J4P0C629 311 aa11.54□□□□□ -0.56
DDB1-216ENST00000539739 ARL14EPLP0DKL9 152 aa11.54□□□□□ -0.56
DDB1-216ENST00000539739 ESDP10768 282 aa11.54□□□□□ -0.56
DDB1-216ENST00000539739 KRTAP10-11P60412 298 aa11.54□□□□□ -0.56
DDB1-216ENST00000539739 UBE2L3P68036 154 aaKnown RBP11.54□□□□□ -0.56
DDB1-216ENST00000539739 ZNF726P1Q15940 193 aa11.54□□□□□ -0.56
DDB1-216ENST00000539739 BATFQ16520 125 aa11.54□□□□□ -0.56
DDB1-216ENST00000539739 URGCP-MRPS24S4R325 110 aa11.54□□□□□ -0.56
DDB1-216ENST00000539739 MAP1LC3B2A6NCE7 125 aa11.53□□□□□ -0.56
DDB1-216ENST00000539739 ISLRO14498 428 aa11.53□□□□□ -0.56
DDB1-216ENST00000539739 PDE6HQ13956 83 aa11.53□□□□□ -0.56
DDB1-216ENST00000539739 ACTL10Q5JWF8 245 aa11.53□□□□□ -0.56
DDB1-216ENST00000539739 KPRPQ5T749 579 aaPredicted RBP11.53□□□□□ -0.56
DDB1-216ENST00000539739 BLNKQ8WV28 456 aa11.53□□□□□ -0.56
DDB1-216ENST00000539739 ZNF503Q96F45 646 aa11.53□□□□□ -0.56
DDB1-216ENST00000539739 SLC50A1Q9BRV3 221 aa11.53□□□□□ -0.56
DDB1-216ENST00000539739 MAP1LC3BQ9GZQ8 125 aa11.53□□□□□ -0.56
DDB1-216ENST00000539739 ZNF586Q9NXT0 402 aa11.53□□□□□ -0.56
DDB1-216ENST00000539739 TRBV19A0A075B6N1 114 aa11.53□□□□□ -0.56
DDB1-216ENST00000539739 ZNF253O75346 499 aa11.53□□□□□ -0.56
DDB1-216ENST00000539739 PSMB3P49720 205 aa11.53□□□□□ -0.56
DDB1-216ENST00000539739 MBD3L1Q8WWY6 194 aa11.53□□□□□ -0.56
DDB1-216ENST00000539739 FXYD5Q96DB9 178 aa11.53□□□□□ -0.56
DDB1-216ENST00000539739 C17orf77Q96MU5 243 aa11.53□□□□□ -0.56
DDB1-216ENST00000539739 PRR25Q96S07 402 aa11.53□□□□□ -0.56
DDB1-216ENST00000539739 TMEM167BQ9NRX6 74 aa11.53□□□□□ -0.56
DDB1-216ENST00000539739 CLEC5AQ9NY25 188 aa11.53□□□□□ -0.56
DDB1-216ENST00000539739 H3BTX0 84 aa11.52□□□□□ -0.57
DDB1-216ENST00000539739 SOCS3O14543 225 aa11.52□□□□□ -0.57
DDB1-216ENST00000539739 CD7P09564 240 aa11.52□□□□□ -0.57
DDB1-216ENST00000539739 GCHFRP30047 84 aa11.52□□□□□ -0.57
DDB1-216ENST00000539739 CNN1P51911 297 aaKnown RBP11.52□□□□□ -0.57
DDB1-216ENST00000539739 FAM110AQ9BQ89 295 aa11.52□□□□□ -0.57
DDB1-216ENST00000539739 OR11H12B2RN74 326 aa11.51□□□□□ -0.57
DDB1-216ENST00000539739 PFN1P07737 140 aaKnown RBP11.51□□□□□ -0.57
DDB1-216ENST00000539739 ZNF688P0C7X2 276 aa11.51□□□□□ -0.57
DDB1-216ENST00000539739 HNRNPA3P51991 378 aaKnown RBP11.51□□□□□ -0.57
DDB1-216ENST00000539739 PSG9Q00887 426 aa11.51□□□□□ -0.57
DDB1-216ENST00000539739 STPG4Q8N801 248 aa11.51□□□□□ -0.57
DDB1-216ENST00000539739 ZNF331Q9NQX6 463 aaPredicted RBP11.51□□□□□ -0.57
DDB1-216ENST00000539739 NOTCH1P46531 2555 aa11.5□□□□□ -0.57
DDB1-216ENST00000539739 TRAV1-1A0A0B4J248 108 aa11.5□□□□□ -0.57
DDB1-216ENST00000539739 PSMG4Q5JS54 123 aa11.5□□□□□ -0.57
DDB1-216ENST00000539739 NIT1Q86X76 327 aa11.5□□□□□ -0.57
DDB1-216ENST00000539739 AAMDCQ9H7C9 122 aa11.5□□□□□ -0.57
DDB1-216ENST00000539739 SLC17A3O00476 420 aa11.49□□□□□ -0.57
DDB1-216ENST00000539739 DEFB131AP59861 70 aa11.49□□□□□ -0.57
DDB1-216ENST00000539739 LYPD1Q8N2G4 141 aa11.49□□□□□ -0.57
DDB1-216ENST00000539739 SSBP4Q9BWG4 385 aaPredicted RBP11.49□□□□□ -0.57
DDB1-216ENST00000539739 MAP6D1Q9H9H5 199 aa11.49□□□□□ -0.57
DDB1-216ENST00000539739 TRAV8-2A0A0B4J237 113 aa11.49□□□□□ -0.57
DDB1-216ENST00000539739 NDUFB4O95168 129 aa11.49□□□□□ -0.57
DDB1-216ENST00000539739 ICAM4Q14773 271 aa11.49□□□□□ -0.57
DDB1-216ENST00000539739 ODF3L2Q3SX64 289 aa11.49□□□□□ -0.57
DDB1-216ENST00000539739 IGFL4Q6B9Z1 124 aa11.49□□□□□ -0.57
DDB1-216ENST00000539739 NAT8Q9UHE5 227 aa11.49□□□□□ -0.57
DDB1-216ENST00000539739 NBEAL1Q6ZS30 2694 aa11.48□□□□□ -0.57
DDB1-216ENST00000539739 A0A1B0GV50 99 aa11.48□□□□□ -0.57
DDB1-216ENST00000539739 SMIM17P0DL12 118 aa11.48□□□□□ -0.57
DDB1-216ENST00000539739 CTRLP40313 264 aa11.48□□□□□ -0.57
DDB1-216ENST00000539739 RNF182Q8N6D2 247 aa11.48□□□□□ -0.57
DDB1-216ENST00000539739 ANAPC16Q96DE5 110 aa11.48□□□□□ -0.57
DDB1-216ENST00000539739 ZNF479Q96JC4 524 aa11.48□□□□□ -0.57
DDB1-216ENST00000539739 SDF2L1Q9HCN8 221 aa11.48□□□□□ -0.57
DDB1-216ENST00000539739 VAMP3Q15836 100 aa11.47□□□□□ -0.57
DDB1-216ENST00000539739 Q8N1Y9 231 aa11.47□□□□□ -0.57
DDB1-216ENST00000539739 Q9H3A6 140 aa11.47□□□□□ -0.57
DDB1-216ENST00000539739 C19orf73Q9NVV2 129 aa11.47□□□□□ -0.57
DDB1-216ENST00000539739 APRG1Q8IVJ8 170 aa11.46□□□□□ -0.57
DDB1-216ENST00000539739 EXOC3-AS1Q8N2X6 119 aa11.46□□□□□ -0.57
DDB1-216ENST00000539739 CYB561D1Q8N8Q1 229 aa11.46□□□□□ -0.57
DDB1-216ENST00000539739 C20orf173Q96LM9 149 aa11.46□□□□□ -0.57
DDB1-216ENST00000539739 OTORQ9NRC9 128 aa11.46□□□□□ -0.57
DDB1-216ENST00000539739 A0A1W2PRE2 83 aa11.46□□□□□ -0.58
DDB1-216ENST00000539739 PRB2P02812 416 aaPredicted RBP11.46□□□□□ -0.58
DDB1-216ENST00000539739 IGLC3P0DOY3 106 aa11.46□□□□□ -0.58
DDB1-216ENST00000539739 HLA-DMBP28068 263 aa11.46□□□□□ -0.58
DDB1-216ENST00000539739 SUMO1P63165 101 aaKnown RBP11.46□□□□□ -0.58
DDB1-216ENST00000539739 DEFB125Q8N687 156 aa11.46□□□□□ -0.58
DDB1-216ENST00000539739 MRPL53Q96EL3 112 aaKnown RBP11.46□□□□□ -0.58
DDB1-216ENST00000539739 LOC102723971A0A1B0GUV8 181 aa11.45□□□□□ -0.58
DDB1-216ENST00000539739 PGPA6NDG6 321 aa11.45□□□□□ -0.58
DDB1-216ENST00000539739 CSN1S1P47710 185 aa11.45□□□□□ -0.58
DDB1-216ENST00000539739 EBLN2Q6P2I7 272 aa11.45□□□□□ -0.58
DDB1-216ENST00000539739 KCNIP4Q6PIL6 250 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 192.8 ms