RNA–Protein interactions for RNA: ENST00000539559.6

TMEM260-203, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best)

Gene TMEM260, Length 2,680 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-203ENST00000539559 TMEM8BA6NDV4 472 aa15.68■□□□□ 0.1
TMEM260-203ENST00000539559 FABP5P3A8MUU1 101 aa15.68■□□□□ 0.1
TMEM260-203ENST00000539559 ZNF207O43670 478 aaKnown RBP15.68■□□□□ 0.1
TMEM260-203ENST00000539559 TRAV40A0A0B4J280 105 aa15.67■□□□□ 0.1
TMEM260-203ENST00000539559 IGKCP01834 107 aa15.67■□□□□ 0.1
TMEM260-203ENST00000539559 CDSNQ15517 529 aa15.67■□□□□ 0.1
TMEM260-203ENST00000539559 COX8CQ7Z4L0 72 aa15.67■□□□□ 0.1
TMEM260-203ENST00000539559 LY6G5BQ8NDX9 201 aa15.67■□□□□ 0.1
TMEM260-203ENST00000539559 TRBV25-1A0A075B6N4 114 aa15.67■□□□□ 0.1
TMEM260-203ENST00000539559 SPRY2O43597 315 aa15.67■□□□□ 0.1
TMEM260-203ENST00000539559 OR11H6Q8NGC7 330 aa15.67■□□□□ 0.1
TMEM260-203ENST00000539559 AGRNO00468 2067 aa15.67■□□□□ 0.1
TMEM260-203ENST00000539559 IGKV3D-20A0A0C4DH25 116 aa15.66■□□□□ 0.1
TMEM260-203ENST00000539559 S100A7AQ86SG5 101 aa15.66■□□□□ 0.1
TMEM260-203ENST00000539559 MAPKAPK5-AS1Q8N8E1 139 aa15.66■□□□□ 0.1
TMEM260-203ENST00000539559 TTC9CQ8N5M4 171 aa15.66■□□□□ 0.1
TMEM260-203ENST00000539559 SPTBN1Q01082 2364 aaKnown RBP15.66■□□□□ 0.1
TMEM260-203ENST00000539559 PIEZO1Q92508 2521 aa15.66■□□□□ 0.1
TMEM260-203ENST00000539559 TMEM238C9JI98 176 aa15.65■□□□□ 0.1
TMEM260-203ENST00000539559 UFC1Q9Y3C8 167 aa15.65■□□□□ 0.1
TMEM260-203ENST00000539559 GOSR1O95249 250 aa15.65■□□□□ 0.1
TMEM260-203ENST00000539559 CEACAM3P40198 252 aa15.65■□□□□ 0.1
TMEM260-203ENST00000539559 ZMAT4Q9H898 229 aa15.65■□□□□ 0.1
TMEM260-203ENST00000539559 MRPL35Q9NZE8 188 aaKnown RBP15.65■□□□□ 0.1
TMEM260-203ENST00000539559 ECSCRQ19T08 205 aa15.64■□□□□ 0.09
TMEM260-203ENST00000539559 TEX48A0A1B0GUV7 120 aa15.64■□□□□ 0.09
TMEM260-203ENST00000539559 EFNA4P52798 201 aa15.64■□□□□ 0.09
TMEM260-203ENST00000539559 SMIM17P0DL12 118 aa15.63■□□□□ 0.09
TMEM260-203ENST00000539559 C15orf32Q32M92 178 aa15.63■□□□□ 0.09
TMEM260-203ENST00000539559 MTURNQ8N3F0 131 aa15.63■□□□□ 0.09
TMEM260-203ENST00000539559 OR5A1Q8NGJ0 315 aa15.63■□□□□ 0.09
TMEM260-203ENST00000539559 NXT2Q9NPJ8 142 aaKnown RBP15.63■□□□□ 0.09
TMEM260-203ENST00000539559 AKAP6Q13023 2319 aa15.63■□□□□ 0.09
TMEM260-203ENST00000539559 IGHV7-81A0A0B4J1V7 117 aa15.62■□□□□ 0.09
TMEM260-203ENST00000539559 J3KRW8 73 aa15.62■□□□□ 0.09
TMEM260-203ENST00000539559 CLEC3BP05452 202 aa15.62■□□□□ 0.09
TMEM260-203ENST00000539559 ZNF48Q96MX3 618 aaPredicted RBP15.62■□□□□ 0.09
TMEM260-203ENST00000539559 ODF3BA8MYP8 253 aa15.62■□□□□ 0.09
TMEM260-203ENST00000539559 VMO1Q7Z5L0 202 aa15.62■□□□□ 0.09
TMEM260-203ENST00000539559 TMEM190Q8WZ59 177 aa15.62■□□□□ 0.09
TMEM260-203ENST00000539559 CNFNQ9BYD5 112 aa15.62■□□□□ 0.09
TMEM260-203ENST00000539559 AGPAT4-IT1Q9H0P7 198 aa15.62■□□□□ 0.09
TMEM260-203ENST00000539559 DPM2O94777 84 aa15.61■□□□□ 0.09
TMEM260-203ENST00000539559 CELSR1Q9NYQ6 3014 aa15.61■□□□□ 0.09
TMEM260-203ENST00000539559 IGLV2-18A0A075B6J9 118 aa15.61■□□□□ 0.09
TMEM260-203ENST00000539559 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa15.61■□□□□ 0.09
TMEM260-203ENST00000539559 PHLDA1Q8WV24 401 aaPredicted RBP15.61■□□□□ 0.09
TMEM260-203ENST00000539559 KLK15Q9H2R5 256 aa15.61■□□□□ 0.09
TMEM260-203ENST00000539559 LINC01559Q495D7 138 aa15.61■□□□□ 0.09
TMEM260-203ENST00000539559 COL6A6A6NMZ7 2263 aa15.6■□□□□ 0.09
TMEM260-203ENST00000539559 PRTN3P24158 256 aa15.6■□□□□ 0.09
TMEM260-203ENST00000539559 Q8N8P6 123 aa15.6■□□□□ 0.09
TMEM260-203ENST00000539559 LINC01548A6NM66 108 aa15.59■□□□□ 0.09
TMEM260-203ENST00000539559 BUB3O43684 328 aa15.59■□□□□ 0.09
TMEM260-203ENST00000539559 CLEC19AQ6UXS0 136 aa15.59■□□□□ 0.09
TMEM260-203ENST00000539559 LCNL1Q6ZST4 164 aa15.59■□□□□ 0.09
TMEM260-203ENST00000539559 CEND1Q8N111 149 aa15.59■□□□□ 0.09
TMEM260-203ENST00000539559 LINC01546A6NGU7 62 aa15.59■□□□□ 0.09
TMEM260-203ENST00000539559 G3V318 75 aa15.58■□□□□ 0.08
TMEM260-203ENST00000539559 AMTNQ6UX39 209 aa15.58■□□□□ 0.08
TMEM260-203ENST00000539559 ZFAND3Q9H8U3 227 aa15.58■□□□□ 0.08
TMEM260-203ENST00000539559 WFDC2Q14508 124 aa15.58■□□□□ 0.08
TMEM260-203ENST00000539559 NRACQ8N912 160 aa15.58■□□□□ 0.08
TMEM260-203ENST00000539559 HIGD1BQ9P298 99 aa15.58■□□□□ 0.08
TMEM260-203ENST00000539559 IGHV7-4-1A0A0J9YVY3 117 aa15.57■□□□□ 0.08
TMEM260-203ENST00000539559 IGF1P05019 195 aa15.57■□□□□ 0.08
TMEM260-203ENST00000539559 Q8N6K4 173 aa15.57■□□□□ 0.08
TMEM260-203ENST00000539559 PIFOQ8TCI5 191 aa15.57■□□□□ 0.08
TMEM260-203ENST00000539559 CLPSL1A2RUU4 121 aa15.56■□□□□ 0.08
TMEM260-203ENST00000539559 ZFP36P26651 326 aaKnown RBP15.56■□□□□ 0.08
TMEM260-203ENST00000539559 Q8N9W7 124 aa15.56■□□□□ 0.08
TMEM260-203ENST00000539559 ZNF502Q8TBZ5 544 aa15.56■□□□□ 0.08
TMEM260-203ENST00000539559 MYOZ3Q8TDC0 251 aa15.56■□□□□ 0.08
TMEM260-203ENST00000539559 TRAV8-2A0A0B4J237 113 aa15.55■□□□□ 0.08
TMEM260-203ENST00000539559 H3BVH4 76 aa15.55■□□□□ 0.08
TMEM260-203ENST00000539559 ATP6V0E1O15342 81 aa15.55■□□□□ 0.08
TMEM260-203ENST00000539559 ATP5LO75964 103 aa15.55■□□□□ 0.08
TMEM260-203ENST00000539559 LAGE3Q14657 143 aa15.55■□□□□ 0.08
TMEM260-203ENST00000539559 GTSF1LQ9H1H1 148 aa15.55■□□□□ 0.08
TMEM260-203ENST00000539559 H3BMG7 143 aa15.55■□□□□ 0.08
TMEM260-203ENST00000539559 DEFB1P60022 68 aa15.55■□□□□ 0.08
TMEM260-203ENST00000539559 SPANXN1Q5VSR9 72 aa15.55■□□□□ 0.08
TMEM260-203ENST00000539559 DEFB104AQ8WTQ1 72 aa15.55■□□□□ 0.08
TMEM260-203ENST00000539559 TIMD4Q96H15 378 aa15.55■□□□□ 0.08
TMEM260-203ENST00000539559 IGLL5B9A064 214 aa15.54■□□□□ 0.08
TMEM260-203ENST00000539559 SRSF2Q01130 221 aaKnown RBP15.54■□□□□ 0.08
TMEM260-203ENST00000539559 PRR9Q5T870 116 aa15.54■□□□□ 0.08
TMEM260-203ENST00000539559 SH2D6Q7Z4S9 175 aa15.54■□□□□ 0.08
TMEM260-203ENST00000539559 CCDC140Q96MF4 163 aa15.54■□□□□ 0.08
TMEM260-203ENST00000539559 M0R1W7 72 aa15.54■□□□□ 0.08
TMEM260-203ENST00000539559 TM2D2Q9BX73 214 aa15.54■□□□□ 0.08
TMEM260-203ENST00000539559 CACNA1AO00555 2505 aa15.54■□□□□ 0.08
TMEM260-203ENST00000539559 ITPR1Q14643 2758 aa15.54■□□□□ 0.08
TMEM260-203ENST00000539559 TMEM78Q5T7P6 136 aa15.53■□□□□ 0.08
TMEM260-203ENST00000539559 HIST1H4GQ99525 98 aa15.53■□□□□ 0.08
TMEM260-203ENST00000539559 CCDC144NLQ6NUI1 221 aa15.52■□□□□ 0.08
TMEM260-203ENST00000539559 ZNF479Q96JC4 524 aa15.52■□□□□ 0.08
TMEM260-203ENST00000539559 LINC00527Q9UJ94 153 aa15.52■□□□□ 0.08
TMEM260-203ENST00000539559 SCGB2A1O75556 95 aa15.52■□□□□ 0.07
TMEM260-203ENST00000539559 C12orf74Q32Q52 190 aa15.52■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 164.1 ms