RNA–Protein interactions for RNA: ENST00000539204.5

YBX3-207, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 649 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-207ENST00000539204 RPL7P18124 248 aaKnown RBP8.01□□□□□ -1.13
YBX3-207ENST00000539204 CRYBA4P53673 196 aa8.01□□□□□ -1.13
YBX3-207ENST00000539204 NHLH2Q02577 135 aa8.01□□□□□ -1.13
YBX3-207ENST00000539204 BPIFCQ8NFQ6 507 aa8.01□□□□□ -1.13
YBX3-207ENST00000539204 PYGO2Q9BRQ0 406 aa8.01□□□□□ -1.13
YBX3-207ENST00000539204 WFDC1Q9HC57 220 aa8.01□□□□□ -1.13
YBX3-207ENST00000539204 GSN-AS1Q9NRJ2 163 aa8.01□□□□□ -1.13
YBX3-207ENST00000539204 IGKV1OR2-108A0A075B7D4 117 aa8□□□□□ -1.13
YBX3-207ENST00000539204 TRAV12-3A0A0B4J271 114 aa8□□□□□ -1.13
YBX3-207ENST00000539204 SSSCA1O60232 199 aa8□□□□□ -1.13
YBX3-207ENST00000539204 ASIPP42127 132 aa8□□□□□ -1.13
YBX3-207ENST00000539204 SULT1A2P50226 295 aa8□□□□□ -1.13
YBX3-207ENST00000539204 ZNF266Q14584 549 aa8□□□□□ -1.13
YBX3-207ENST00000539204 COMMD7Q86VX2 200 aa8□□□□□ -1.13
YBX3-207ENST00000539204 THAP8Q8NA92 274 aa8□□□□□ -1.13
YBX3-207ENST00000539204 CIB3Q96Q77 187 aaPredicted RBP8□□□□□ -1.13
YBX3-207ENST00000539204 PARD6GQ9BYG4 376 aaPredicted RBP8□□□□□ -1.13
YBX3-207ENST00000539204 RBKSQ9H477 322 aa8□□□□□ -1.13
YBX3-207ENST00000539204 J3KRW8 73 aa7.99□□□□□ -1.13
YBX3-207ENST00000539204 IGHV3-53P01767 116 aa7.99□□□□□ -1.13
YBX3-207ENST00000539204 GATA2P23769 480 aaPredicted RBP7.99□□□□□ -1.13
YBX3-207ENST00000539204 SRIP30626 198 aa7.99□□□□□ -1.13
YBX3-207ENST00000539204 SULT1A1P50225 295 aa7.99□□□□□ -1.13
YBX3-207ENST00000539204 CAV2P51636 162 aa7.99□□□□□ -1.13
YBX3-207ENST00000539204 RAB11AP62491 216 aa7.99□□□□□ -1.13
YBX3-207ENST00000539204 BLOC1S1P78537 153 aa7.99□□□□□ -1.13
YBX3-207ENST00000539204 TMED6Q8WW62 240 aa7.99□□□□□ -1.13
YBX3-207ENST00000539204 C8orf49Q96NF6 230 aa7.99□□□□□ -1.13
YBX3-207ENST00000539204 CHAC1Q9BUX1 264 aa7.99□□□□□ -1.13
YBX3-207ENST00000539204 MRPL32Q9BYC8 188 aaKnown RBP7.99□□□□□ -1.13
YBX3-207ENST00000539204 PSENENQ9NZ42 101 aa7.99□□□□□ -1.13
YBX3-207ENST00000539204 RAB19A4D1S5 217 aa7.98□□□□□ -1.13
YBX3-207ENST00000539204 K7EQD1 137 aa7.98□□□□□ -1.13
YBX3-207ENST00000539204 SPINK4O60575 86 aa7.98□□□□□ -1.13
YBX3-207ENST00000539204 RAB5CP51148 216 aa7.98□□□□□ -1.13
YBX3-207ENST00000539204 FHL2Q14192 279 aa7.98□□□□□ -1.13
YBX3-207ENST00000539204 ACOT6Q3I5F7 207 aaPredicted RBP7.98□□□□□ -1.13
YBX3-207ENST00000539204 FAM74A1Q5RGS3 127 aa7.98□□□□□ -1.13
YBX3-207ENST00000539204 TMEM14EPQ6UXP3 125 aa7.98□□□□□ -1.13
YBX3-207ENST00000539204 TMEM182Q6ZP80 229 aaPredicted RBP7.98□□□□□ -1.13
YBX3-207ENST00000539204 STX12Q86Y82 276 aa7.98□□□□□ -1.13
YBX3-207ENST00000539204 PCNPQ8WW12 178 aaKnown RBP7.98□□□□□ -1.13
YBX3-207ENST00000539204 Q9HAA7 133 aa7.98□□□□□ -1.13
YBX3-207ENST00000539204 DNAJC4Q9NNZ3 241 aa7.98□□□□□ -1.13
YBX3-207ENST00000539204 TNXBP22105 4242 aa7.98□□□□□ -1.13
YBX3-207ENST00000539204 A0A087X0K7 114 aa7.97□□□□□ -1.13
YBX3-207ENST00000539204 IBA57-AS1B1ANH7 110 aa7.97□□□□□ -1.13
YBX3-207ENST00000539204 H3BRN7 92 aa7.97□□□□□ -1.13
YBX3-207ENST00000539204 HBG1P69891 147 aa7.97□□□□□ -1.13
YBX3-207ENST00000539204 HBG2P69892 147 aa7.97□□□□□ -1.13
YBX3-207ENST00000539204 ZNF415Q09FC8 603 aa7.97□□□□□ -1.13
YBX3-207ENST00000539204 ATP6V1FQ16864 119 aa7.97□□□□□ -1.13
YBX3-207ENST00000539204 TDRG1Q3Y452 100 aa7.97□□□□□ -1.13
YBX3-207ENST00000539204 C11orf72Q8NBR9 251 aa7.97□□□□□ -1.13
YBX3-207ENST00000539204 OR5C1Q8NGR4 320 aa7.97□□□□□ -1.13
YBX3-207ENST00000539204 LYPD6BQ8NI32 183 aa7.97□□□□□ -1.13
YBX3-207ENST00000539204 ATP5SQ99766 215 aa7.97□□□□□ -1.13
YBX3-207ENST00000539204 SHANK2-AS3Q9BTD1 123 aa7.97□□□□□ -1.13
YBX3-207ENST00000539204 SMIM3Q9BZL3 60 aa7.97□□□□□ -1.13
YBX3-207ENST00000539204 IGHV3-38A0A0C4DH36 116 aa7.96□□□□□ -1.14
YBX3-207ENST00000539204 UMAD1C9J7I0 102 aa7.96□□□□□ -1.14
YBX3-207ENST00000539204 CST7O76096 145 aa7.96□□□□□ -1.14
YBX3-207ENST00000539204 GYPEP15421 78 aa7.96□□□□□ -1.14
YBX3-207ENST00000539204 LEPP41159 167 aa7.96□□□□□ -1.14
YBX3-207ENST00000539204 UQCC3Q6UW78 93 aa7.96□□□□□ -1.14
YBX3-207ENST00000539204 CIRBP-AS1Q8TBR5 109 aa7.96□□□□□ -1.14
YBX3-207ENST00000539204 HIGD1AQ9Y241 93 aa7.96□□□□□ -1.14
YBX3-207ENST00000539204 STRAPQ9Y3F4 350 aaKnown RBP7.96□□□□□ -1.14
YBX3-207ENST00000539204 KLF12Q9Y4X4 402 aa7.96□□□□□ -1.14
YBX3-207ENST00000539204 TRGV4A0A0C4DH28 118 aa7.95□□□□□ -1.14
YBX3-207ENST00000539204 KRBOX1C9JBD0 128 aa7.95□□□□□ -1.14
YBX3-207ENST00000539204 TEX46H3BTG2 121 aa7.95□□□□□ -1.14
YBX3-207ENST00000539204 MT1HL1P0DM35 61 aa7.95□□□□□ -1.14
YBX3-207ENST00000539204 CT45A10P0DMU9 189 aa7.95□□□□□ -1.14
YBX3-207ENST00000539204 IAPPP10997 89 aa7.95□□□□□ -1.14
YBX3-207ENST00000539204 RPP30P78346 268 aaKnown RBP7.95□□□□□ -1.14
YBX3-207ENST00000539204 ANXA2RQ3ZCQ2 193 aa7.95□□□□□ -1.14
YBX3-207ENST00000539204 LINC01620Q4KN68 170 aa7.95□□□□□ -1.14
YBX3-207ENST00000539204 S100A7AQ86SG5 101 aa7.95□□□□□ -1.14
YBX3-207ENST00000539204 TM2D2Q9BX73 214 aa7.95□□□□□ -1.14
YBX3-207ENST00000539204 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.94□□□□□ -1.14
YBX3-207ENST00000539204 PMS2P5A8MQ11 134 aa7.94□□□□□ -1.14
YBX3-207ENST00000539204 PRAC2D3DTV9 90 aa7.94□□□□□ -1.14
YBX3-207ENST00000539204 HYPMO75409 117 aa7.94□□□□□ -1.14
YBX3-207ENST00000539204 IGLV2-8P01709 118 aa7.94□□□□□ -1.14
YBX3-207ENST00000539204 ORM1P02763 201 aa7.94□□□□□ -1.14
YBX3-207ENST00000539204 OR5G3P0C626 314 aa7.94□□□□□ -1.14
YBX3-207ENST00000539204 ATP6V0CP27449 155 aa7.94□□□□□ -1.14
YBX3-207ENST00000539204 SPANXN5Q5MJ07 72 aa7.94□□□□□ -1.14
YBX3-207ENST00000539204 DPPA3Q6W0C5 159 aa7.94□□□□□ -1.14
YBX3-207ENST00000539204 VGLL1Q99990 258 aa7.94□□□□□ -1.14
YBX3-207ENST00000539204 TXNDC17Q9BRA2 123 aa7.94□□□□□ -1.14
YBX3-207ENST00000539204 PSMG3Q9BT73 122 aaPredicted RBP7.94□□□□□ -1.14
YBX3-207ENST00000539204 ZNF331Q9NQX6 463 aaPredicted RBP7.94□□□□□ -1.14
YBX3-207ENST00000539204 SLC25A5P05141 298 aaKnown RBP7.93□□□□□ -1.14
YBX3-207ENST00000539204 METTL15P1P0C7V9 234 aa7.93□□□□□ -1.14
YBX3-207ENST00000539204 TCL1AP56279 114 aa7.93□□□□□ -1.14
YBX3-207ENST00000539204 RPL37AP61513 92 aaKnown RBP7.93□□□□□ -1.14
YBX3-207ENST00000539204 SERF2P84101 59 aa7.93□□□□□ -1.14
YBX3-207ENST00000539204 ARL16Q0P5N6 197 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms