RNA–Protein interactions for RNA: ENST00000539197.5

CCDC7-209, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC7, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-209ENST00000539197 KIR3DP1A8MWS1 328 aa0.48□□□□□ -2.33
CCDC7-209ENST00000539197 C9JAW5 83 aa0.48□□□□□ -2.33
CCDC7-209ENST00000539197 DPM2O94777 84 aa0.48□□□□□ -2.33
CCDC7-209ENST00000539197 TNFSF15O95150 251 aa0.48□□□□□ -2.33
CCDC7-209ENST00000539197 IGHV3-30P01768 117 aa0.48□□□□□ -2.33
CCDC7-209ENST00000539197 IGKCP01834 107 aa0.48□□□□□ -2.33
CCDC7-209ENST00000539197 IGHV3-30-5P0DP03 117 aa0.48□□□□□ -2.33
CCDC7-209ENST00000539197 CMPK1P30085 196 aa0.48□□□□□ -2.33
CCDC7-209ENST00000539197 CKS2P33552 79 aa0.48□□□□□ -2.33
CCDC7-209ENST00000539197 SNRPD3P62318 126 aaKnown RBP0.48□□□□□ -2.33
CCDC7-209ENST00000539197 C3orf62Q6ZUJ4 267 aa0.48□□□□□ -2.33
CCDC7-209ENST00000539197 OR8I2Q8N0Y5 310 aa0.48□□□□□ -2.33
CCDC7-209ENST00000539197 OTOSQ8NHW6 89 aa0.48□□□□□ -2.33
CCDC7-209ENST00000539197 AP1S3Q96PC3 154 aa0.48□□□□□ -2.33
CCDC7-209ENST00000539197 CCL19Q99731 98 aa0.48□□□□□ -2.33
CCDC7-209ENST00000539197 JPT1Q9UK76 154 aa0.48□□□□□ -2.33
CCDC7-209ENST00000539197 HIGD1AQ9Y241 93 aa0.48□□□□□ -2.33
CCDC7-209ENST00000539197 SNRNP200O75643 2136 aaKnown RBP0.47□□□□□ -2.33
CCDC7-209ENST00000539197 MED23Q9ULK4 1368 aa0.47□□□□□ -2.33
CCDC7-209ENST00000539197 PIK3C2AO00443 1686 aa0.47□□□□□ -2.33
CCDC7-209ENST00000539197 ADGBQ8N7X0 1667 aa0.47□□□□□ -2.33
CCDC7-209ENST00000539197 MUC5ACP98088 5654 aa0.47□□□□□ -2.33
CCDC7-209ENST00000539197 CASP8AP2Q9UKL3 1982 aa0.47□□□□□ -2.33
CCDC7-209ENST00000539197 IGHV1-24A0A0C4DH33 117 aa0.47□□□□□ -2.33
CCDC7-209ENST00000539197 A0A1B0GX51 115 aa0.47□□□□□ -2.33
CCDC7-209ENST00000539197 TMEM189A5PLL7 270 aa0.47□□□□□ -2.33
CCDC7-209ENST00000539197 IFITM5A6NNB3 132 aa0.47□□□□□ -2.33
CCDC7-209ENST00000539197 SULT1C4O75897 302 aa0.47□□□□□ -2.33
CCDC7-209ENST00000539197 PAEPP09466 180 aa0.47□□□□□ -2.33
CCDC7-209ENST00000539197 IL7P13232 177 aa0.47□□□□□ -2.33
CCDC7-209ENST00000539197 ETV6P41212 452 aa0.47□□□□□ -2.33
CCDC7-209ENST00000539197 DNAJB13P59910 316 aa0.47□□□□□ -2.33
CCDC7-209ENST00000539197 PCBD1P61457 104 aa0.47□□□□□ -2.33
CCDC7-209ENST00000539197 LSM3P62310 102 aaKnown RBP0.47□□□□□ -2.33
CCDC7-209ENST00000539197 HSD17B12Q53GQ0 312 aa0.47□□□□□ -2.33
CCDC7-209ENST00000539197 Q6ZQY7 126 aa0.47□□□□□ -2.33
CCDC7-209ENST00000539197 PYDC1Q8WXC3 89 aa0.47□□□□□ -2.33
CCDC7-209ENST00000539197 SMIM7Q9BQ49 75 aa0.47□□□□□ -2.33
CCDC7-209ENST00000539197 MRPL36Q9P0J6 103 aaKnown RBP0.47□□□□□ -2.33
CCDC7-209ENST00000539197 CNTRLQ7Z7A1 2325 aa0.47□□□□□ -2.33
CCDC7-209ENST00000539197 PEAK1Q9H792 1746 aa0.47□□□□□ -2.33
CCDC7-209ENST00000539197 ALPK3Q96L96 1907 aa0.46□□□□□ -2.34
CCDC7-209ENST00000539197 ZCCHC11Q5TAX3 1644 aaKnown RBP0.46□□□□□ -2.34
CCDC7-209ENST00000539197 PLXNA4Q9HCM2 1894 aa0.46□□□□□ -2.34
CCDC7-209ENST00000539197 GYPBP06028 91 aa0.46□□□□□ -2.34
CCDC7-209ENST00000539197 PSPHP78330 225 aa0.46□□□□□ -2.34
CCDC7-209ENST00000539197 IQCJQ1A5X6 159 aa0.46□□□□□ -2.34
CCDC7-209ENST00000539197 CCSMST1Q4G0I0 132 aa0.46□□□□□ -2.34
CCDC7-209ENST00000539197 LYPD5Q6UWN5 251 aa0.46□□□□□ -2.34
CCDC7-209ENST00000539197 TCTE3Q8IZS6 198 aa0.46□□□□□ -2.34
CCDC7-209ENST00000539197 C10orf111Q8N326 155 aa0.46□□□□□ -2.34
CCDC7-209ENST00000539197 OR8J3Q8NGG0 315 aa0.46□□□□□ -2.34
CCDC7-209ENST00000539197 PLAC4Q8WY50 150 aa0.46□□□□□ -2.34
CCDC7-209ENST00000539197 CALML5Q9NZT1 146 aa0.46□□□□□ -2.34
CCDC7-209ENST00000539197 UBR2Q8IWV8 1755 aa0.45□□□□□ -2.34
CCDC7-209ENST00000539197 LOC101927531A0A1B0GV80 90 aa0.45□□□□□ -2.34
CCDC7-209ENST00000539197 A6NN06 94 aa0.45□□□□□ -2.34
CCDC7-209ENST00000539197 K7EIL1 84 aa0.45□□□□□ -2.34
CCDC7-209ENST00000539197 CD3DP04234 171 aa0.45□□□□□ -2.34
CCDC7-209ENST00000539197 SCTP09683 121 aa0.45□□□□□ -2.34
CCDC7-209ENST00000539197 CCDC153Q494R4 210 aa0.45□□□□□ -2.34
CCDC7-209ENST00000539197 TMEM91Q6ZNR0 172 aa0.45□□□□□ -2.34
CCDC7-209ENST00000539197 IDO2Q6ZQW0 420 aa0.45□□□□□ -2.34
CCDC7-209ENST00000539197 LINC00208Q96KT6 92 aa0.45□□□□□ -2.34
CCDC7-209ENST00000539197 BANF2Q9H503 90 aa0.45□□□□□ -2.34
CCDC7-209ENST00000539197 BATF3Q9NR55 127 aa0.45□□□□□ -2.34
CCDC7-209ENST00000539197 C19orf12Q9NSK7 152 aa0.45□□□□□ -2.34
CCDC7-209ENST00000539197 DNAJC15Q9Y5T4 150 aa0.45□□□□□ -2.34
CCDC7-209ENST00000539197 ASCC3Q8N3C0 2202 aaKnown RBP0.45□□□□□ -2.34
CCDC7-209ENST00000539197 FSIP2Q5CZC0 6907 aa0.44□□□□□ -2.34
CCDC7-209ENST00000539197 MYO18AQ92614 2054 aaKnown RBP0.44□□□□□ -2.34
CCDC7-209ENST00000539197 ARAP1Q96P48 1450 aa0.44□□□□□ -2.34
CCDC7-209ENST00000539197 SIP14410 1827 aa0.44□□□□□ -2.34
CCDC7-209ENST00000539197 LAMA4Q16363 1823 aa0.44□□□□□ -2.34
CCDC7-209ENST00000539197 A0A0D9SG42 100 aa0.44□□□□□ -2.34
CCDC7-209ENST00000539197 NBDYA0A0U1RRE5 68 aa0.44□□□□□ -2.34
CCDC7-209ENST00000539197 TMEM30CPA0ZSE6 113 aa0.44□□□□□ -2.34
CCDC7-209ENST00000539197 PHGR1C9JFL3 82 aa0.44□□□□□ -2.34
CCDC7-209ENST00000539197 ARPC5O15511 151 aa0.44□□□□□ -2.34
CCDC7-209ENST00000539197 TPST1O60507 370 aa0.44□□□□□ -2.34
CCDC7-209ENST00000539197 OR2H2O95918 312 aa0.44□□□□□ -2.34
CCDC7-209ENST00000539197 TFF1P04155 84 aa0.44□□□□□ -2.34
CCDC7-209ENST00000539197 SCGB1A1P11684 91 aa0.44□□□□□ -2.34
CCDC7-209ENST00000539197 HLA-DRB4P13762 266 aa0.44□□□□□ -2.34
CCDC7-209ENST00000539197 HIST1H1BP16401 226 aaKnown RBP0.44□□□□□ -2.34
CCDC7-209ENST00000539197 SPINT3P49223 89 aa0.44□□□□□ -2.34
CCDC7-209ENST00000539197 RHOHQ15669 191 aa0.44□□□□□ -2.34
CCDC7-209ENST00000539197 ZNF56Q15929 161 aa0.44□□□□□ -2.34
CCDC7-209ENST00000539197 ASB16-AS1Q495Z4 193 aa0.44□□□□□ -2.34
CCDC7-209ENST00000539197 SPINK9Q5DT21 86 aa0.44□□□□□ -2.34
CCDC7-209ENST00000539197 XAF1Q6GPH4 301 aa0.44□□□□□ -2.34
CCDC7-209ENST00000539197 KRTAP19-3Q7Z4W3 81 aa0.44□□□□□ -2.34
CCDC7-209ENST00000539197 AIF1LQ9BQI0 150 aa0.44□□□□□ -2.34
CCDC7-209ENST00000539197 METTL1Q9UBP6 276 aaKnown RBP0.44□□□□□ -2.34
CCDC7-209ENST00000539197 HLA-DRB4X5D2U9 266 aa0.44□□□□□ -2.34
CCDC7-209ENST00000539197 EML5Q05BV3 1969 aa0.44□□□□□ -2.34
CCDC7-209ENST00000539197 MDN1Q9NU22 5596 aa0.43□□□□□ -2.34
CCDC7-209ENST00000539197 PTPRFP10586 1907 aa0.43□□□□□ -2.34
CCDC7-209ENST00000539197 BORCS7-ASMTA0A0B4J1R7 106 aa0.43□□□□□ -2.34
CCDC7-209ENST00000539197 A0A0G2JMM0 328 aa0.43□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms