RNA–Protein interactions for RNA: ENST00000538809.6

RAB40B-202, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2 BASIC

Gene RAB40B, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-202ENST00000538809 OTORQ9NRC9 128 aa10.43□□□□□ -0.74
RAB40B-202ENST00000538809 TP53TG3Q9ULZ0 132 aa10.43□□□□□ -0.74
RAB40B-202ENST00000538809 DYNC1H1Q14204 4646 aaKnown RBP10.43□□□□□ -0.74
RAB40B-202ENST00000538809 TRGV1A0A0A0MS02 117 aa10.42□□□□□ -0.74
RAB40B-202ENST00000538809 RGS13O14921 159 aa10.42□□□□□ -0.74
RAB40B-202ENST00000538809 STAG3L2P0CL84 134 aa10.42□□□□□ -0.74
RAB40B-202ENST00000538809 STAG3L3P0CL85 134 aa10.42□□□□□ -0.74
RAB40B-202ENST00000538809 CSN1S1P47710 185 aa10.42□□□□□ -0.74
RAB40B-202ENST00000538809 CCL18P55774 89 aa10.42□□□□□ -0.74
RAB40B-202ENST00000538809 C1orf134Q5TEV5 83 aa10.42□□□□□ -0.74
RAB40B-202ENST00000538809 TNFSF18Q9UNG2 199 aa10.42□□□□□ -0.74
RAB40B-202ENST00000538809 KLF12Q9Y4X4 402 aa10.42□□□□□ -0.74
RAB40B-202ENST00000538809 TRGV2A0A075B6R0 118 aa10.41□□□□□ -0.74
RAB40B-202ENST00000538809 A0A1W2PPV4 95 aa10.41□□□□□ -0.74
RAB40B-202ENST00000538809 CDC34P49427 236 aaPredicted RBP10.41□□□□□ -0.74
RAB40B-202ENST00000538809 SOHLH1Q5JUK2 328 aa10.41□□□□□ -0.74
RAB40B-202ENST00000538809 SSX7Q7RTT5 188 aa10.41□□□□□ -0.74
RAB40B-202ENST00000538809 ARL6IP6Q8N6S5 226 aa10.41□□□□□ -0.74
RAB40B-202ENST00000538809 SUN5Q8TC36 379 aa10.41□□□□□ -0.74
RAB40B-202ENST00000538809 RXFP4Q8TDU9 374 aa10.41□□□□□ -0.74
RAB40B-202ENST00000538809 TMED6Q8WW62 240 aa10.41□□□□□ -0.74
RAB40B-202ENST00000538809 C18orf15Q96N68 181 aa10.41□□□□□ -0.74
RAB40B-202ENST00000538809 RPH3ALQ9UNE2 315 aa10.41□□□□□ -0.74
RAB40B-202ENST00000538809 LENEPQ9Y5L5 61 aa10.41□□□□□ -0.74
RAB40B-202ENST00000538809 DNAH11Q96DT5 4516 aa10.4□□□□□ -0.74
RAB40B-202ENST00000538809 IGHV1OR15-1A0A075B7D0 117 aa10.4□□□□□ -0.74
RAB40B-202ENST00000538809 NBDYA0A0U1RRE5 68 aa10.4□□□□□ -0.74
RAB40B-202ENST00000538809 PGPA6NDG6 321 aa10.4□□□□□ -0.74
RAB40B-202ENST00000538809 HMGB3O15347 200 aaKnown RBP10.4□□□□□ -0.74
RAB40B-202ENST00000538809 ARL14EPLP0DKL9 152 aa10.4□□□□□ -0.74
RAB40B-202ENST00000538809 TCL1AP56279 114 aa10.4□□□□□ -0.74
RAB40B-202ENST00000538809 SERF2P84101 59 aa10.4□□□□□ -0.74
RAB40B-202ENST00000538809 IBA57Q5T440 356 aaKnown RBP10.4□□□□□ -0.74
RAB40B-202ENST00000538809 OR2T35Q8NGX2 323 aa10.4□□□□□ -0.74
RAB40B-202ENST00000538809 HYLS1Q96M11 299 aa10.4□□□□□ -0.74
RAB40B-202ENST00000538809 SH3BGRL3Q9H299 93 aa10.4□□□□□ -0.74
RAB40B-202ENST00000538809 MRPL16Q9NX20 251 aaKnown RBP10.4□□□□□ -0.74
RAB40B-202ENST00000538809 FXYD6-FXYD2A0A087WZ82 144 aa10.39□□□□□ -0.75
RAB40B-202ENST00000538809 SPINK4O60575 86 aa10.39□□□□□ -0.75
RAB40B-202ENST00000538809 MUC21Q5SSG8 566 aa10.39□□□□□ -0.75
RAB40B-202ENST00000538809 Q6AWC8 147 aa10.39□□□□□ -0.75
RAB40B-202ENST00000538809 RPL7L1Q6DKI1 246 aaKnown RBP10.39□□□□□ -0.75
RAB40B-202ENST00000538809 RAB24Q969Q5 203 aa10.39□□□□□ -0.75
RAB40B-202ENST00000538809 ARPC5LQ9BPX5 153 aa10.39□□□□□ -0.75
RAB40B-202ENST00000538809 IGHV3-53P01767 116 aa10.38□□□□□ -0.75
RAB40B-202ENST00000538809 INO80EQ8NBZ0 244 aaPredicted RBP10.38□□□□□ -0.75
RAB40B-202ENST00000538809 MBP02144 154 aa10.37□□□□□ -0.75
RAB40B-202ENST00000538809 GCHFRP30047 84 aa10.37□□□□□ -0.75
RAB40B-202ENST00000538809 ZNF415Q09FC8 603 aa10.37□□□□□ -0.75
RAB40B-202ENST00000538809 FAM74A1Q5RGS3 127 aa10.37□□□□□ -0.75
RAB40B-202ENST00000538809 TVP23CQ96ET8 276 aa10.37□□□□□ -0.75
RAB40B-202ENST00000538809 VSIG2Q96IQ7 327 aa10.37□□□□□ -0.75
RAB40B-202ENST00000538809 ST6GAL2Q96JF0 529 aa10.37□□□□□ -0.75
RAB40B-202ENST00000538809 TRAV8-1A0A0A6YYK1 113 aa10.36□□□□□ -0.75
RAB40B-202ENST00000538809 H3BNG1 76 aa10.36□□□□□ -0.75
RAB40B-202ENST00000538809 GNG5P63218 68 aa10.36□□□□□ -0.75
RAB40B-202ENST00000538809 TNP2Q05952 138 aa10.36□□□□□ -0.75
RAB40B-202ENST00000538809 ESRGQ1W209 222 aa10.36□□□□□ -0.75
RAB40B-202ENST00000538809 GOLT1AQ6ZVE7 132 aa10.36□□□□□ -0.75
RAB40B-202ENST00000538809 ZNF575Q86XF7 245 aa10.36□□□□□ -0.75
RAB40B-202ENST00000538809 C6orf223Q8N319 242 aa10.36□□□□□ -0.75
RAB40B-202ENST00000538809 CMTM2Q8TAZ6 248 aa10.36□□□□□ -0.75
RAB40B-202ENST00000538809 A0A096LPF7 62 aa10.35□□□□□ -0.75
RAB40B-202ENST00000538809 ZNF726P1Q15940 193 aa10.35□□□□□ -0.75
RAB40B-202ENST00000538809 KRTAP1-5Q9BYS1 174 aa10.35□□□□□ -0.75
RAB40B-202ENST00000538809 Q9H8V8 135 aa10.35□□□□□ -0.75
RAB40B-202ENST00000538809 CYTL1Q9NRR1 136 aa10.35□□□□□ -0.75
RAB40B-202ENST00000538809 NAGKQ9UJ70 344 aa10.35□□□□□ -0.75
RAB40B-202ENST00000538809 BORCS7-ASMTA0A0B4J1R7 106 aa10.34□□□□□ -0.75
RAB40B-202ENST00000538809 F6UZH7 168 aa10.34□□□□□ -0.75
RAB40B-202ENST00000538809 TMEM183BQ1AE95 376 aa10.34□□□□□ -0.75
RAB40B-202ENST00000538809 TDRG1Q3Y452 100 aa10.34□□□□□ -0.75
RAB40B-202ENST00000538809 TMEM183AQ8IXX5 376 aa10.34□□□□□ -0.75
RAB40B-202ENST00000538809 C5orf17Q8NAS9 161 aa10.34□□□□□ -0.75
RAB40B-202ENST00000538809 ACTR3CQ9C0K3 210 aaPredicted RBP10.34□□□□□ -0.75
RAB40B-202ENST00000538809 MDFICQ9P1T7 246 aa10.34□□□□□ -0.75
RAB40B-202ENST00000538809 MRPS16Q9Y3D3 137 aaKnown RBP10.34□□□□□ -0.75
RAB40B-202ENST00000538809 SERTM2A0A1B0GWG4 89 aa10.33□□□□□ -0.76
RAB40B-202ENST00000538809 GGTLC3B5MD39 225 aa10.33□□□□□ -0.76
RAB40B-202ENST00000538809 CXorf1O96002 111 aa10.33□□□□□ -0.76
RAB40B-202ENST00000538809 TCRAP04437 139 aa10.33□□□□□ -0.76
RAB40B-202ENST00000538809 UPK3BQ9BT76 320 aa10.33□□□□□ -0.76
RAB40B-202ENST00000538809 TMEM167BQ9NRX6 74 aa10.33□□□□□ -0.76
RAB40B-202ENST00000538809 CTXND1A0A1B0GTU2 59 aa10.32□□□□□ -0.76
RAB40B-202ENST00000538809 SMLR1H3BR10 107 aa10.32□□□□□ -0.76
RAB40B-202ENST00000538809 TAAR5O14804 337 aa10.32□□□□□ -0.76
RAB40B-202ENST00000538809 ARPC5O15511 151 aa10.32□□□□□ -0.76
RAB40B-202ENST00000538809 PAX4O43316 350 aa10.32□□□□□ -0.76
RAB40B-202ENST00000538809 IGLV2-11P01706 119 aa10.32□□□□□ -0.76
RAB40B-202ENST00000538809 FAM159AQ6UWV7 190 aa10.32□□□□□ -0.76
RAB40B-202ENST00000538809 SGK494Q96LW2 274 aa10.32□□□□□ -0.76
RAB40B-202ENST00000538809 C8orf49Q96NF6 230 aa10.32□□□□□ -0.76
RAB40B-202ENST00000538809 KRTAP17-1Q9BYP8 105 aa10.32□□□□□ -0.76
RAB40B-202ENST00000538809 TRGV11A0A075B6L2 103 aa10.31□□□□□ -0.76
RAB40B-202ENST00000538809 A0A1W2PRE2 83 aa10.31□□□□□ -0.76
RAB40B-202ENST00000538809 SFTA3P0C7M3 94 aa10.31□□□□□ -0.76
RAB40B-202ENST00000538809 MED14OSP0DP75 135 aa10.31□□□□□ -0.76
RAB40B-202ENST00000538809 SUMO1P63165 101 aaKnown RBP10.31□□□□□ -0.76
RAB40B-202ENST00000538809 TTC32Q5I0X7 151 aa10.31□□□□□ -0.76
RAB40B-202ENST00000538809 TREM1Q9NP99 234 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 117 ms