RNA–Protein interactions for RNA: ENST00000538363.1

TNFRSF1A-211, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 554 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-211ENST00000538363 LINC01551Q86U37 167 aa7.92□□□□□ -1.14
TNFRSF1A-211ENST00000538363 DEFB125Q8N687 156 aa7.92□□□□□ -1.14
TNFRSF1A-211ENST00000538363 OR10G8Q8NGN5 311 aa7.92□□□□□ -1.14
TNFRSF1A-211ENST00000538363 IGF2BP2-AS1Q96M15 143 aa7.92□□□□□ -1.14
TNFRSF1A-211ENST00000538363 FAM110AQ9BQ89 295 aa7.92□□□□□ -1.14
TNFRSF1A-211ENST00000538363 TMEM208Q9BTX3 173 aa7.92□□□□□ -1.14
TNFRSF1A-211ENST00000538363 SRD5A3Q9H8P0 318 aa7.92□□□□□ -1.14
TNFRSF1A-211ENST00000538363 NAGKQ9UJ70 344 aa7.92□□□□□ -1.14
TNFRSF1A-211ENST00000538363 IGLV2-11P01706 119 aa7.91□□□□□ -1.14
TNFRSF1A-211ENST00000538363 AMBPP02760 352 aa7.91□□□□□ -1.14
TNFRSF1A-211ENST00000538363 ORM1P02763 201 aa7.91□□□□□ -1.14
TNFRSF1A-211ENST00000538363 ADCYAP1P18509 176 aa7.91□□□□□ -1.14
TNFRSF1A-211ENST00000538363 CDKN1BP46527 198 aa7.91□□□□□ -1.14
TNFRSF1A-211ENST00000538363 SPINK13Q1W4C9 94 aa7.91□□□□□ -1.14
TNFRSF1A-211ENST00000538363 IBA57Q5T440 356 aaKnown RBP7.91□□□□□ -1.14
TNFRSF1A-211ENST00000538363 FAM162BQ5T6X4 162 aa7.91□□□□□ -1.14
TNFRSF1A-211ENST00000538363 ANK2Q01484 3957 aa7.91□□□□□ -1.14
TNFRSF1A-211ENST00000538363 TRBV20OR9-2A0A075B6H5 130 aa7.9□□□□□ -1.14
TNFRSF1A-211ENST00000538363 TRAV21A0A0B4J279 112 aa7.9□□□□□ -1.14
TNFRSF1A-211ENST00000538363 XKRY2A2RUG3 117 aa7.9□□□□□ -1.14
TNFRSF1A-211ENST00000538363 TMEM189A5PLL7 270 aa7.9□□□□□ -1.14
TNFRSF1A-211ENST00000538363 G3V4G9 280 aa7.9□□□□□ -1.14
TNFRSF1A-211ENST00000538363 H7BYZ3 331 aa7.9□□□□□ -1.14
TNFRSF1A-211ENST00000538363 M0R2Z0 102 aa7.9□□□□□ -1.14
TNFRSF1A-211ENST00000538363 S100PP25815 95 aa7.9□□□□□ -1.14
TNFRSF1A-211ENST00000538363 RHEBQ15382 184 aa7.9□□□□□ -1.14
TNFRSF1A-211ENST00000538363 C10orf91Q5T1B1 145 aa7.9□□□□□ -1.14
TNFRSF1A-211ENST00000538363 MORN3Q6PF18 240 aaPredicted RBP7.9□□□□□ -1.14
TNFRSF1A-211ENST00000538363 ANAPC16Q96DE5 110 aa7.9□□□□□ -1.14
TNFRSF1A-211ENST00000538363 ZC2HC1AQ96GY0 325 aa7.9□□□□□ -1.14
TNFRSF1A-211ENST00000538363 SFRP2Q96HF1 295 aa7.9□□□□□ -1.14
TNFRSF1A-211ENST00000538363 ODF3Q96PU9 254 aa7.9□□□□□ -1.14
TNFRSF1A-211ENST00000538363 C1QTNF4Q9BXJ3 329 aa7.9□□□□□ -1.14
TNFRSF1A-211ENST00000538363 WFDC10AQ9H1F0 79 aa7.9□□□□□ -1.14
TNFRSF1A-211ENST00000538363 TRAV12-2A0A075B6T6 113 aa7.89□□□□□ -1.15
TNFRSF1A-211ENST00000538363 LOC102724200A0A096LPH7 203 aaPredicted RBP7.89□□□□□ -1.15
TNFRSF1A-211ENST00000538363 TRAV12-3A0A0B4J271 114 aa7.89□□□□□ -1.15
TNFRSF1A-211ENST00000538363 TRBV7-9A0A0J9YWB2 115 aa7.89□□□□□ -1.15
TNFRSF1A-211ENST00000538363 C7orf77A4D0Y5 90 aa7.89□□□□□ -1.15
TNFRSF1A-211ENST00000538363 C7orf71A4D174 169 aa7.89□□□□□ -1.15
TNFRSF1A-211ENST00000538363 INSP01308 110 aa7.89□□□□□ -1.15
TNFRSF1A-211ENST00000538363 RPS20P60866 119 aaKnown RBP7.89□□□□□ -1.15
TNFRSF1A-211ENST00000538363 FAM159AQ6UWV7 190 aa7.89□□□□□ -1.15
TNFRSF1A-211ENST00000538363 OR2D3Q8NGH3 330 aa7.89□□□□□ -1.15
TNFRSF1A-211ENST00000538363 ISOC2Q96AB3 205 aa7.89□□□□□ -1.15
TNFRSF1A-211ENST00000538363 CTDSP1Q9GZU7 261 aa7.89□□□□□ -1.15
TNFRSF1A-211ENST00000538363 RNASE7Q9H1E1 156 aaKnown RBP7.89□□□□□ -1.15
TNFRSF1A-211ENST00000538363 XCL2Q9UBD3 114 aa7.89□□□□□ -1.15
TNFRSF1A-211ENST00000538363 IGHV3OR16-12A0A075B7B8 117 aa7.88□□□□□ -1.15
TNFRSF1A-211ENST00000538363 TMSB15BA0A087X1C1 80 aa7.88□□□□□ -1.15
TNFRSF1A-211ENST00000538363 K7EN84 100 aa7.88□□□□□ -1.15
TNFRSF1A-211ENST00000538363 SH2D1AO60880 128 aa7.88□□□□□ -1.15
TNFRSF1A-211ENST00000538363 PFN1P07737 140 aaKnown RBP7.88□□□□□ -1.15
TNFRSF1A-211ENST00000538363 HTN1P15515 57 aa7.88□□□□□ -1.15
TNFRSF1A-211ENST00000538363 S100A4P26447 101 aaKnown RBP7.88□□□□□ -1.15
TNFRSF1A-211ENST00000538363 APOC4P55056 127 aa7.88□□□□□ -1.15
TNFRSF1A-211ENST00000538363 RPL19P84098 196 aaKnown RBP7.88□□□□□ -1.15
TNFRSF1A-211ENST00000538363 BTN1A1Q13410 526 aa7.88□□□□□ -1.15
TNFRSF1A-211ENST00000538363 RNF212Q495C1 297 aa7.88□□□□□ -1.15
TNFRSF1A-211ENST00000538363 DEFB121Q5J5C9 76 aa7.88□□□□□ -1.15
TNFRSF1A-211ENST00000538363 KCNIP4Q6PIL6 250 aa7.88□□□□□ -1.15
TNFRSF1A-211ENST00000538363 NUDT10Q8NFP7 164 aa7.88□□□□□ -1.15
TNFRSF1A-211ENST00000538363 BORCS7Q96B45 105 aa7.88□□□□□ -1.15
TNFRSF1A-211ENST00000538363 NUDT11Q96G61 164 aa7.88□□□□□ -1.15
TNFRSF1A-211ENST00000538363 LINC01587Q99440 93 aa7.88□□□□□ -1.15
TNFRSF1A-211ENST00000538363 RPP21Q9H633 154 aaKnown RBP7.88□□□□□ -1.15
TNFRSF1A-211ENST00000538363 OSTCQ9NRP0 149 aa7.88□□□□□ -1.15
TNFRSF1A-211ENST00000538363 GOLT1BQ9Y3E0 138 aa7.88□□□□□ -1.15
TNFRSF1A-211ENST00000538363 NBEAL1Q6ZS30 2694 aa7.88□□□□□ -1.15
TNFRSF1A-211ENST00000538363 A8MWL6 223 aa7.87□□□□□ -1.15
TNFRSF1A-211ENST00000538363 CA1P00915 261 aaPredicted RBP7.87□□□□□ -1.15
TNFRSF1A-211ENST00000538363 IGLV2-8P01709 118 aa7.87□□□□□ -1.15
TNFRSF1A-211ENST00000538363 CRISP2P16562 243 aa7.87□□□□□ -1.15
TNFRSF1A-211ENST00000538363 MUC21Q5SSG8 566 aa7.87□□□□□ -1.15
TNFRSF1A-211ENST00000538363 TRPT1Q86TN4 253 aaKnown RBP7.87□□□□□ -1.15
TNFRSF1A-211ENST00000538363 CLUHP3Q96NS8 147 aa7.87□□□□□ -1.15
TNFRSF1A-211ENST00000538363 MLST8Q9BVC4 326 aa7.87□□□□□ -1.15
TNFRSF1A-211ENST00000538363 TPPP3Q9BW30 176 aa7.87□□□□□ -1.15
TNFRSF1A-211ENST00000538363 CSTL1Q9H114 145 aa7.87□□□□□ -1.15
TNFRSF1A-211ENST00000538363 TIMM8BQ9Y5J9 83 aaPredicted RBP7.87□□□□□ -1.15
TNFRSF1A-211ENST00000538363 CBY3A6NI87 242 aa7.86□□□□□ -1.15
TNFRSF1A-211ENST00000538363 KRTAP10-11P60412 298 aa7.86□□□□□ -1.15
TNFRSF1A-211ENST00000538363 FAM231DQ6ZW35 169 aa7.86□□□□□ -1.15
TNFRSF1A-211ENST00000538363 ZFAND2AQ8N6M9 145 aa7.86□□□□□ -1.15
TNFRSF1A-211ENST00000538363 KCNS1Q96KK3 526 aa7.86□□□□□ -1.15
TNFRSF1A-211ENST00000538363 SORL1Q92673 2214 aa7.86□□□□□ -1.15
TNFRSF1A-211ENST00000538363 GRIFINA4D1Z8 144 aa7.85□□□□□ -1.15
TNFRSF1A-211ENST00000538363 ZNF80P51504 273 aaPredicted RBP7.85□□□□□ -1.15
TNFRSF1A-211ENST00000538363 EGFEM1PQ0D2K5 195 aa7.85□□□□□ -1.15
TNFRSF1A-211ENST00000538363 GFI1BQ5VTD9 330 aa7.85□□□□□ -1.15
TNFRSF1A-211ENST00000538363 Q8N1Y9 231 aa7.85□□□□□ -1.15
TNFRSF1A-211ENST00000538363 SMCO4Q9NRQ5 59 aa7.85□□□□□ -1.15
TNFRSF1A-211ENST00000538363 C19orf73Q9NVV2 129 aa7.85□□□□□ -1.15
TNFRSF1A-211ENST00000538363 AGRNO00468 2067 aa7.84□□□□□ -1.15
TNFRSF1A-211ENST00000538363 A0A087WWC5 75 aa7.84□□□□□ -1.15
TNFRSF1A-211ENST00000538363 RBMY1BA6NDE4 496 aaKnown RBP7.84□□□□□ -1.15
TNFRSF1A-211ENST00000538363 RBMY1EA6NEQ0 496 aaKnown RBP7.84□□□□□ -1.15
TNFRSF1A-211ENST00000538363 KLLNB2CW77 178 aa7.84□□□□□ -1.15
TNFRSF1A-211ENST00000538363 RBMY1DP0C7P1 496 aaKnown RBP7.84□□□□□ -1.15
TNFRSF1A-211ENST00000538363 IGHV4-30-4P0DP06 118 aa7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms