RNA–Protein interactions for RNA: ENST00000537981.5

RTN3-208, Transcript of reticulon 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTN3, Length 2,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-208ENST00000537981 Q6ZS92 163 aa8.34□□□□□ -1.07
RTN3-208ENST00000537981 ZNF575Q86XF7 245 aa8.34□□□□□ -1.07
RTN3-208ENST00000537981 STHQ8IWL8 128 aa8.34□□□□□ -1.07
RTN3-208ENST00000537981 RNF185Q96GF1 192 aa8.34□□□□□ -1.07
RTN3-208ENST00000537981 ELANEP08246 267 aa8.34□□□□□ -1.07
RTN3-208ENST00000537981 TAL2Q16559 108 aa8.34□□□□□ -1.07
RTN3-208ENST00000537981 RPS19BP1Q86WX3 136 aaKnown RBP8.34□□□□□ -1.07
RTN3-208ENST00000537981 FANCD2OSQ96PS1 177 aa8.34□□□□□ -1.07
RTN3-208ENST00000537981 TRGV9Q99603 122 aa8.34□□□□□ -1.07
RTN3-208ENST00000537981 TPSG1Q9NRR2 321 aa8.34□□□□□ -1.07
RTN3-208ENST00000537981 C21orf62Q9NYP8 219 aa8.34□□□□□ -1.07
RTN3-208ENST00000537981 CEP250Q9BV73 2442 aa8.33□□□□□ -1.08
RTN3-208ENST00000537981 SPTBN4Q9H254 2564 aa8.33□□□□□ -1.08
RTN3-208ENST00000537981 TEX49A0A1B0GTD5 131 aa8.33□□□□□ -1.08
RTN3-208ENST00000537981 RPL7P18124 248 aaKnown RBP8.33□□□□□ -1.08
RTN3-208ENST00000537981 C17orf58Q2M2W7 97 aa8.33□□□□□ -1.08
RTN3-208ENST00000537981 SLC25A45Q8N413 288 aa8.33□□□□□ -1.08
RTN3-208ENST00000537981 MRAPQ8TCY5 172 aa8.33□□□□□ -1.08
RTN3-208ENST00000537981 IMMP1LQ96LU5 166 aa8.33□□□□□ -1.08
RTN3-208ENST00000537981 HES7Q9BYE0 225 aa8.33□□□□□ -1.08
RTN3-208ENST00000537981 NDUFA4L2Q9NRX3 87 aa8.33□□□□□ -1.08
RTN3-208ENST00000537981 RAI1Q7Z5J4 1906 aaPredicted RBP8.33□□□□□ -1.08
RTN3-208ENST00000537981 HOXB4P17483 251 aaPredicted RBP8.33□□□□□ -1.08
RTN3-208ENST00000537981 POU2AF1Q16633 256 aa8.33□□□□□ -1.08
RTN3-208ENST00000537981 SBSPONQ8IVN8 264 aa8.33□□□□□ -1.08
RTN3-208ENST00000537981 C15orf53Q8NAA6 179 aa8.33□□□□□ -1.08
RTN3-208ENST00000537981 KLHL30-AS1Q8NEE0 82 aa8.33□□□□□ -1.08
RTN3-208ENST00000537981 TRAV26-2A0A0B4J265 109 aa8.32□□□□□ -1.08
RTN3-208ENST00000537981 OOSP1A8MZH6 123 aa8.32□□□□□ -1.08
RTN3-208ENST00000537981 C9JAW5 83 aa8.32□□□□□ -1.08
RTN3-208ENST00000537981 CD7P09564 240 aa8.32□□□□□ -1.08
RTN3-208ENST00000537981 UBE2D1P51668 147 aa8.32□□□□□ -1.08
RTN3-208ENST00000537981 KLF14Q8TD94 323 aaPredicted RBP8.32□□□□□ -1.08
RTN3-208ENST00000537981 NTN5Q8WTR8 489 aaPredicted RBP8.32□□□□□ -1.08
RTN3-208ENST00000537981 KLK15Q9H2R5 256 aa8.32□□□□□ -1.08
RTN3-208ENST00000537981 ROS1P08922 2347 aa8.32□□□□□ -1.08
RTN3-208ENST00000537981 ADGRG4Q8IZF6 3080 aa8.31□□□□□ -1.08
RTN3-208ENST00000537981 MED13Q9UHV7 2174 aa8.31□□□□□ -1.08
RTN3-208ENST00000537981 NCBP2LA6PVI3 153 aaKnown RBP8.31□□□□□ -1.08
RTN3-208ENST00000537981 SHISA9B4DS77 424 aa8.31□□□□□ -1.08
RTN3-208ENST00000537981 KIR2DS2P43631 304 aa8.31□□□□□ -1.08
RTN3-208ENST00000537981 TMEM155Q4W5P6 130 aa8.31□□□□□ -1.08
RTN3-208ENST00000537981 TMEM78Q5T7P6 136 aa8.31□□□□□ -1.08
RTN3-208ENST00000537981 ASCL5Q7RTU5 278 aa8.31□□□□□ -1.08
RTN3-208ENST00000537981 OR11H6Q8NGC7 330 aa8.31□□□□□ -1.08
RTN3-208ENST00000537981 CNOT1A5YKK6 2376 aaKnown RBP8.31□□□□□ -1.08
RTN3-208ENST00000537981 IGKV3D-15A0A087WSY6 115 aa8.31□□□□□ -1.08
RTN3-208ENST00000537981 IGHV1OR15-9A0A0B4J2B8 117 aa8.31□□□□□ -1.08
RTN3-208ENST00000537981 PATE3B3GLJ2 98 aa8.31□□□□□ -1.08
RTN3-208ENST00000537981 RS1O15537 224 aa8.31□□□□□ -1.08
RTN3-208ENST00000537981 SLC25A20O43772 301 aa8.31□□□□□ -1.08
RTN3-208ENST00000537981 SH2D1AO60880 128 aa8.31□□□□□ -1.08
RTN3-208ENST00000537981 LYZP61626 148 aa8.31□□□□□ -1.08
RTN3-208ENST00000537981 SPINK14Q6IE38 97 aa8.31□□□□□ -1.08
RTN3-208ENST00000537981 Q8N1Y9 231 aa8.31□□□□□ -1.08
RTN3-208ENST00000537981 ZCCHC24Q8N2G6 241 aaKnown RBP8.31□□□□□ -1.08
RTN3-208ENST00000537981 THAP8Q8NA92 274 aa8.31□□□□□ -1.08
RTN3-208ENST00000537981 AAMDCQ9H7C9 122 aa8.31□□□□□ -1.08
RTN3-208ENST00000537981 MDFICQ9P1T7 246 aa8.31□□□□□ -1.08
RTN3-208ENST00000537981 EGR2P11161 476 aaPredicted RBP8.3□□□□□ -1.08
RTN3-208ENST00000537981 ZNF80P51504 273 aaPredicted RBP8.3□□□□□ -1.08
RTN3-208ENST00000537981 Q0VFX4 171 aa8.3□□□□□ -1.08
RTN3-208ENST00000537981 Q6ZS46 218 aa8.3□□□□□ -1.08
RTN3-208ENST00000537981 NDUFA11Q86Y39 141 aa8.3□□□□□ -1.08
RTN3-208ENST00000537981 Q8TAT8 98 aa8.3□□□□□ -1.08
RTN3-208ENST00000537981 OTORQ9NRC9 128 aa8.3□□□□□ -1.08
RTN3-208ENST00000537981 CACNA1EQ15878 2313 aa8.3□□□□□ -1.08
RTN3-208ENST00000537981 MBD3L5A6NJ08 208 aaPredicted RBP8.3□□□□□ -1.08
RTN3-208ENST00000537981 TMEM262E9PQX1 116 aa8.3□□□□□ -1.08
RTN3-208ENST00000537981 J3QL48 77 aa8.3□□□□□ -1.08
RTN3-208ENST00000537981 NBR2O15453 112 aa8.3□□□□□ -1.08
RTN3-208ENST00000537981 EIF4EBP3O60516 100 aaPredicted RBP8.3□□□□□ -1.08
RTN3-208ENST00000537981 CEMP1Q6PRD7 247 aaPredicted RBP8.3□□□□□ -1.08
RTN3-208ENST00000537981 ZNF474Q6S9Z5 364 aaPredicted RBP8.3□□□□□ -1.08
RTN3-208ENST00000537981 VKORC1Q9BQB6 163 aa8.3□□□□□ -1.08
RTN3-208ENST00000537981 ARRDC1-AS1Q9H2J1 176 aa8.3□□□□□ -1.08
RTN3-208ENST00000537981 ZFHX3Q15911 3703 aa8.29□□□□□ -1.08
RTN3-208ENST00000537981 IQCF6A8MYZ5 107 aa8.29□□□□□ -1.08
RTN3-208ENST00000537981 H7C2G1 150 aa8.29□□□□□ -1.08
RTN3-208ENST00000537981 ERHP84090 104 aaKnown RBP8.29□□□□□ -1.08
RTN3-208ENST00000537981 MRPL20Q9BYC9 149 aaKnown RBP8.29□□□□□ -1.08
RTN3-208ENST00000537981 RP1L1Q8IWN7 2480 aaPredicted RBP8.29□□□□□ -1.08
RTN3-208ENST00000537981 IGLV2-18A0A075B6J9 118 aa8.29□□□□□ -1.08
RTN3-208ENST00000537981 A0A1W2PPI3 338 aa8.29□□□□□ -1.08
RTN3-208ENST00000537981 CCL11P51671 97 aa8.29□□□□□ -1.08
RTN3-208ENST00000537981 DEFB104AQ8WTQ1 72 aa8.29□□□□□ -1.08
RTN3-208ENST00000537981 SMIM9A6NGZ8 99 aa8.28□□□□□ -1.08
RTN3-208ENST00000537981 ZNF815PA8K554 130 aa8.28□□□□□ -1.08
RTN3-208ENST00000537981 CFC1BP0CG36 223 aa8.28□□□□□ -1.08
RTN3-208ENST00000537981 CFC1P0CG37 223 aa8.28□□□□□ -1.08
RTN3-208ENST00000537981 SCGB1C2P0DMR2 95 aa8.28□□□□□ -1.08
RTN3-208ENST00000537981 GUSBP11Q6P575 273 aa8.28□□□□□ -1.08
RTN3-208ENST00000537981 IGKV2-40A0A087WW87 121 aaPredicted RBP8.28□□□□□ -1.08
RTN3-208ENST00000537981 LYZL6O75951 148 aa8.28□□□□□ -1.08
RTN3-208ENST00000537981 IGKV2D-40P01614 121 aaPredicted RBP8.28□□□□□ -1.08
RTN3-208ENST00000537981 TRGV3P03979 118 aa8.28□□□□□ -1.08
RTN3-208ENST00000537981 SLC25A16P16260 332 aa8.28□□□□□ -1.08
RTN3-208ENST00000537981 NBL1P41271 181 aa8.28□□□□□ -1.08
RTN3-208ENST00000537981 EMP1P54849 157 aa8.28□□□□□ -1.08
RTN3-208ENST00000537981 FOXC1Q12948 553 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms