RNA–Protein interactions for RNA: ENST00000537582.1

SFSWAP-206, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 1,576 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-206ENST00000537582 C9JCJ5 164 aa11.53□□□□□ -0.56
SFSWAP-206ENST00000537582 M0R2Z0 102 aa11.53□□□□□ -0.56
SFSWAP-206ENST00000537582 RPL35AP18077 110 aaKnown RBP11.53□□□□□ -0.56
SFSWAP-206ENST00000537582 OR5I1Q13606 314 aa11.53□□□□□ -0.56
SFSWAP-206ENST00000537582 TMEM241Q24JQ0 296 aa11.53□□□□□ -0.56
SFSWAP-206ENST00000537582 TRPT1Q86TN4 253 aaKnown RBP11.53□□□□□ -0.56
SFSWAP-206ENST00000537582 LINC00518Q8N0U6 118 aa11.53□□□□□ -0.56
SFSWAP-206ENST00000537582 ZC2HC1AQ96GY0 325 aa11.53□□□□□ -0.56
SFSWAP-206ENST00000537582 MLST8Q9BVC4 326 aa11.53□□□□□ -0.56
SFSWAP-206ENST00000537582 SDF2L1Q9HCN8 221 aa11.53□□□□□ -0.56
SFSWAP-206ENST00000537582 NOTCH1P46531 2555 aa11.52□□□□□ -0.57
SFSWAP-206ENST00000537582 A8MTW9 85 aa11.52□□□□□ -0.57
SFSWAP-206ENST00000537582 DUSP14O95147 198 aaKnown RBP11.52□□□□□ -0.57
SFSWAP-206ENST00000537582 S100A9P06702 114 aaKnown RBP11.52□□□□□ -0.57
SFSWAP-206ENST00000537582 MGST1P10620 155 aaKnown RBP11.52□□□□□ -0.57
SFSWAP-206ENST00000537582 ZNF80P51504 273 aaPredicted RBP11.52□□□□□ -0.57
SFSWAP-206ENST00000537582 CMC4P56277 68 aaPredicted RBP11.52□□□□□ -0.57
SFSWAP-206ENST00000537582 RPL23P62829 140 aaKnown RBP11.52□□□□□ -0.57
SFSWAP-206ENST00000537582 SPINK13Q1W4C9 94 aa11.52□□□□□ -0.57
SFSWAP-206ENST00000537582 LINC00322Q6ZN03 302 aaPredicted RBP11.52□□□□□ -0.57
SFSWAP-206ENST00000537582 LINC01551Q86U37 167 aa11.52□□□□□ -0.57
SFSWAP-206ENST00000537582 STHQ8IWL8 128 aa11.52□□□□□ -0.57
SFSWAP-206ENST00000537582 ZFAND2AQ8N6M9 145 aa11.52□□□□□ -0.57
SFSWAP-206ENST00000537582 NAT8Q9UHE5 227 aa11.52□□□□□ -0.57
SFSWAP-206ENST00000537582 TRAV12-2A0A075B6T6 113 aa11.51□□□□□ -0.57
SFSWAP-206ENST00000537582 ADIRFQ15847 76 aa11.51□□□□□ -0.57
SFSWAP-206ENST00000537582 PRR27Q6MZM9 219 aa11.51□□□□□ -0.57
SFSWAP-206ENST00000537582 TMEM183AQ8IXX5 376 aa11.51□□□□□ -0.57
SFSWAP-206ENST00000537582 ZFP82Q8N141 532 aa11.51□□□□□ -0.57
SFSWAP-206ENST00000537582 CTDSP1Q9GZU7 261 aa11.51□□□□□ -0.57
SFSWAP-206ENST00000537582 SRD5A3Q9H8P0 318 aa11.51□□□□□ -0.57
SFSWAP-206ENST00000537582 DNAH3Q8TD57 4116 aa11.51□□□□□ -0.57
SFSWAP-206ENST00000537582 NBEAL1Q6ZS30 2694 aa11.51□□□□□ -0.57
SFSWAP-206ENST00000537582 CRIP1P50238 77 aa11.5□□□□□ -0.57
SFSWAP-206ENST00000537582 ELOBQ15370 118 aa11.5□□□□□ -0.57
SFSWAP-206ENST00000537582 ZFP30Q9Y2G7 519 aa11.5□□□□□ -0.57
SFSWAP-206ENST00000537582 C5orf52A6NGY3 159 aa11.5□□□□□ -0.57
SFSWAP-206ENST00000537582 UBE2CO00762 179 aa11.5□□□□□ -0.57
SFSWAP-206ENST00000537582 PPP1R14DQ9NXH3 145 aa11.5□□□□□ -0.57
SFSWAP-206ENST00000537582 FBLL1A6NHQ2 334 aaKnown RBP11.49□□□□□ -0.57
SFSWAP-206ENST00000537582 GCGP01275 180 aa11.49□□□□□ -0.57
SFSWAP-206ENST00000537582 CRISP2P16562 243 aa11.49□□□□□ -0.57
SFSWAP-206ENST00000537582 SAPCD1Q5SSQ6 148 aa11.49□□□□□ -0.57
SFSWAP-206ENST00000537582 NDFIP1Q9BT67 221 aa11.49□□□□□ -0.57
SFSWAP-206ENST00000537582 GIG44P09565 113 aaPredicted RBP11.48□□□□□ -0.57
SFSWAP-206ENST00000537582 IGHV4-30-4P0DP06 118 aa11.48□□□□□ -0.57
SFSWAP-206ENST00000537582 RNASE4P34096 147 aaKnown RBP11.48□□□□□ -0.57
SFSWAP-206ENST00000537582 GFI1BQ5VTD9 330 aa11.48□□□□□ -0.57
SFSWAP-206ENST00000537582 ODF3Q96PU9 254 aa11.48□□□□□ -0.57
SFSWAP-206ENST00000537582 RNASE7Q9H1E1 156 aaKnown RBP11.48□□□□□ -0.57
SFSWAP-206ENST00000537582 KLLNB2CW77 178 aa11.47□□□□□ -0.57
SFSWAP-206ENST00000537582 CRXO43186 299 aaPredicted RBP11.47□□□□□ -0.57
SFSWAP-206ENST00000537582 S100A6P06703 90 aa11.47□□□□□ -0.57
SFSWAP-206ENST00000537582 RBMY1A1P0DJD3 496 aaKnown RBP11.47□□□□□ -0.57
SFSWAP-206ENST00000537582 RBMY1CP0DJD4 496 aa11.47□□□□□ -0.57
SFSWAP-206ENST00000537582 LEPP41159 167 aa11.47□□□□□ -0.57
SFSWAP-206ENST00000537582 RBMY1FQ15415 496 aaKnown RBP11.47□□□□□ -0.57
SFSWAP-206ENST00000537582 KPRPQ5T749 579 aaPredicted RBP11.47□□□□□ -0.57
SFSWAP-206ENST00000537582 COX8CQ7Z4L0 72 aa11.47□□□□□ -0.57
SFSWAP-206ENST00000537582 LENEPQ9Y5L5 61 aa11.47□□□□□ -0.57
SFSWAP-206ENST00000537582 LY96Q9Y6Y9 160 aa11.47□□□□□ -0.57
SFSWAP-206ENST00000537582 SH2D1AO60880 128 aa11.46□□□□□ -0.57
SFSWAP-206ENST00000537582 GPX1P07203 203 aa11.46□□□□□ -0.57
SFSWAP-206ENST00000537582 CDKN1BP46527 198 aa11.46□□□□□ -0.57
SFSWAP-206ENST00000537582 SNRPEP62304 92 aaKnown RBP11.46□□□□□ -0.57
SFSWAP-206ENST00000537582 C11orf21Q9P2W6 132 aa11.46□□□□□ -0.57
SFSWAP-206ENST00000537582 XCL2Q9UBD3 114 aa11.46□□□□□ -0.57
SFSWAP-206ENST00000537582 TRBV24-1A0A075B6N3 115 aa11.45□□□□□ -0.58
SFSWAP-206ENST00000537582 TRAV12-3A0A0B4J271 114 aa11.45□□□□□ -0.58
SFSWAP-206ENST00000537582 S100A8P05109 93 aa11.45□□□□□ -0.58
SFSWAP-206ENST00000537582 CXCL1P09341 107 aa11.45□□□□□ -0.58
SFSWAP-206ENST00000537582 AKR1D1P51857 326 aa11.45□□□□□ -0.58
SFSWAP-206ENST00000537582 SMIM12Q96EX1 92 aa11.45□□□□□ -0.58
SFSWAP-206ENST00000537582 CLUHP3Q96NS8 147 aa11.45□□□□□ -0.58
SFSWAP-206ENST00000537582 TRBV7-9A0A0J9YWB2 115 aa11.45□□□□□ -0.58
SFSWAP-206ENST00000537582 RPS10P46783 165 aaKnown RBP11.45□□□□□ -0.58
SFSWAP-206ENST00000537582 RPL19P84098 196 aaKnown RBP11.45□□□□□ -0.58
SFSWAP-206ENST00000537582 C7orf71A4D174 169 aa11.44□□□□□ -0.58
SFSWAP-206ENST00000537582 C19orf71A6NCJ1 209 aa11.44□□□□□ -0.58
SFSWAP-206ENST00000537582 TSPOP30536 169 aa11.44□□□□□ -0.58
SFSWAP-206ENST00000537582 FAM162BQ5T6X4 162 aa11.44□□□□□ -0.58
SFSWAP-206ENST00000537582 NUDT10Q8NFP7 164 aa11.44□□□□□ -0.58
SFSWAP-206ENST00000537582 NUDT11Q96G61 164 aa11.44□□□□□ -0.58
SFSWAP-206ENST00000537582 TGIF2-C20orf24A0A0A6YYL0 155 aa11.43□□□□□ -0.58
SFSWAP-206ENST00000537582 CA1P00915 261 aaPredicted RBP11.43□□□□□ -0.58
SFSWAP-206ENST00000537582 PRM2P04554 102 aa11.43□□□□□ -0.58
SFSWAP-206ENST00000537582 PFN1P07737 140 aaKnown RBP11.43□□□□□ -0.58
SFSWAP-206ENST00000537582 ERVFC1-1P60608 527 aa11.43□□□□□ -0.58
SFSWAP-206ENST00000537582 MUC21Q5SSG8 566 aa11.43□□□□□ -0.58
SFSWAP-206ENST00000537582 SFRP2Q96HF1 295 aa11.43□□□□□ -0.58
SFSWAP-206ENST00000537582 ZMAT5Q9UDW3 170 aaKnown RBP11.43□□□□□ -0.58
SFSWAP-206ENST00000537582 TMSB15BA0A087X1C1 80 aa11.42□□□□□ -0.58
SFSWAP-206ENST00000537582 LOC102724200A0A096LPH7 203 aaPredicted RBP11.42□□□□□ -0.58
SFSWAP-206ENST00000537582 K7EIL1 84 aa11.42□□□□□ -0.58
SFSWAP-206ENST00000537582 ZNF324O75467 553 aaPredicted RBP11.42□□□□□ -0.58
SFSWAP-206ENST00000537582 SMIM6P0DI80 62 aa11.42□□□□□ -0.58
SFSWAP-206ENST00000537582 Q6AWC8 147 aa11.42□□□□□ -0.58
SFSWAP-206ENST00000537582 ANAPC16Q96DE5 110 aa11.42□□□□□ -0.58
SFSWAP-206ENST00000537582 FAM210BQ96KR6 192 aa11.42□□□□□ -0.58
SFSWAP-206ENST00000537582 PYGO2Q9BRQ0 406 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 74.5 ms