RNA–Protein interactions for RNA: ENST00000537529.6

MKS1-204, Transcript of Meckel syndrome, type 1, humanhuman

TSL 1 (best) BASIC

Gene MKS1, Length 2,083 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-204ENST00000537529 IGKV3D-20A0A0C4DH25 116 aa11.91□□□□□ -0.5
MKS1-204ENST00000537529 TM4SF20Q53R12 229 aa11.91□□□□□ -0.5
MKS1-204ENST00000537529 MRPL52Q86TS9 123 aaKnown RBP11.91□□□□□ -0.5
MKS1-204ENST00000537529 SMPXQ9UHP9 88 aa11.91□□□□□ -0.5
MKS1-204ENST00000537529 KLHDC1Q8N7A1 406 aa11.9□□□□□ -0.5
MKS1-204ENST00000537529 C11orf21Q9P2W6 132 aa11.9□□□□□ -0.5
MKS1-204ENST00000537529 SYS1-DBNDD2H3BUS1 97 aa11.9□□□□□ -0.51
MKS1-204ENST00000537529 CRXO43186 299 aaPredicted RBP11.9□□□□□ -0.51
MKS1-204ENST00000537529 CKS2P33552 79 aa11.9□□□□□ -0.51
MKS1-204ENST00000537529 Q6YL49 198 aa11.9□□□□□ -0.51
MKS1-204ENST00000537529 ATOH7Q8N100 152 aa11.9□□□□□ -0.51
MKS1-204ENST00000537529 MAP1LC3CQ9BXW4 147 aa11.9□□□□□ -0.51
MKS1-204ENST00000537529 UFC1Q9Y3C8 167 aa11.9□□□□□ -0.51
MKS1-204ENST00000537529 ZNF462Q96JM2 2506 aa11.9□□□□□ -0.51
MKS1-204ENST00000537529 SPG11Q96JI7 2443 aa11.9□□□□□ -0.51
MKS1-204ENST00000537529 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.89□□□□□ -0.515e-7■■■■□ 20.7
MKS1-204ENST00000537529 MYO18BQ8IUG5 2567 aa11.89□□□□□ -0.51
MKS1-204ENST00000537529 M0R143 59 aa11.89□□□□□ -0.51
MKS1-204ENST00000537529 FOXE3Q13461 319 aa11.89□□□□□ -0.51
MKS1-204ENST00000537529 LINC00173Q6ZV60 143 aa11.89□□□□□ -0.51
MKS1-204ENST00000537529 OR10AG1Q8NH19 301 aa11.89□□□□□ -0.51
MKS1-204ENST00000537529 SIGLEC8Q9NYZ4 499 aa11.89□□□□□ -0.51
MKS1-204ENST00000537529 TRAV9-2A0A087WT02 112 aa11.88□□□□□ -0.51
MKS1-204ENST00000537529 EREGO14944 169 aa11.88□□□□□ -0.51
MKS1-204ENST00000537529 PPBPP02775 128 aa11.88□□□□□ -0.51
MKS1-204ENST00000537529 SAMD13Q5VXD3 122 aa11.88□□□□□ -0.51
MKS1-204ENST00000537529 IFI27P40305 119 aaPredicted RBP11.88□□□□□ -0.51
MKS1-204ENST00000537529 SPATA12Q7Z6I5 190 aa11.88□□□□□ -0.51
MKS1-204ENST00000537529 MSRB1Q9NZV6 116 aa11.88□□□□□ -0.51
MKS1-204ENST00000537529 UQCR10Q9UDW1 63 aa11.88□□□□□ -0.51
MKS1-204ENST00000537529 LOC389332A0A1B0GUA5 103 aa11.87□□□□□ -0.51
MKS1-204ENST00000537529 PET117Q6UWS5 81 aa11.87□□□□□ -0.51
MKS1-204ENST00000537529 RNF185Q96GF1 192 aa11.87□□□□□ -0.51
MKS1-204ENST00000537529 SNHG12Q9BXW3 62 aa11.87□□□□□ -0.51
MKS1-204ENST00000537529 CSMD1Q96PZ7 3565 aa11.87□□□□□ -0.51
MKS1-204ENST00000537529 IGLC3P0DOY3 106 aa11.87□□□□□ -0.51
MKS1-204ENST00000537529 PRR9Q5T870 116 aa11.87□□□□□ -0.51
MKS1-204ENST00000537529 ZFAND2AQ8N6M9 145 aa11.87□□□□□ -0.51
MKS1-204ENST00000537529 OR8A1Q8NGG7 326 aa11.87□□□□□ -0.51
MKS1-204ENST00000537529 Q96MF0 132 aa11.87□□□□□ -0.51
MKS1-204ENST00000537529 LAMTOR2Q9Y2Q5 125 aa11.87□□□□□ -0.51
MKS1-204ENST00000537529 UBR5O95071 2799 aaPredicted RBP11.86□□□□□ -0.51
MKS1-204ENST00000537529 IGKV3-7A0A075B6H7 116 aa11.86□□□□□ -0.51
MKS1-204ENST00000537529 SMKR1H3BMG3 65 aa11.86□□□□□ -0.51
MKS1-204ENST00000537529 NCR2O95944 276 aa11.86□□□□□ -0.51
MKS1-204ENST00000537529 NPYP01303 97 aa11.86□□□□□ -0.51
MKS1-204ENST00000537529 ID1P41134 155 aa11.86□□□□□ -0.51
MKS1-204ENST00000537529 CACNG7P62955 275 aa11.86□□□□□ -0.51
MKS1-204ENST00000537529 C10orf99Q6UWK7 81 aa11.86□□□□□ -0.51
MKS1-204ENST00000537529 SMIM15Q7Z3B0 74 aa11.86□□□□□ -0.51
MKS1-204ENST00000537529 ZNF702PQ9H963 129 aa11.86□□□□□ -0.51
MKS1-204ENST00000537529 TRAV21A0A0B4J279 112 aa11.85□□□□□ -0.51
MKS1-204ENST00000537529 TRBV7-9A0A0J9YWB2 115 aa11.85□□□□□ -0.51
MKS1-204ENST00000537529 OR4C46A6NHA9 309 aa11.85□□□□□ -0.51
MKS1-204ENST00000537529 RPLP1P05386 114 aaKnown RBP11.85□□□□□ -0.51
MKS1-204ENST00000537529 ELANEP08246 267 aa11.85□□□□□ -0.51
MKS1-204ENST00000537529 TIMM8BQ9Y5J9 83 aaPredicted RBP11.85□□□□□ -0.51
MKS1-204ENST00000537529 HOXA3O43365 443 aaPredicted RBP11.85□□□□□ -0.51
MKS1-204ENST00000537529 SNAI2O43623 268 aa11.85□□□□□ -0.51
MKS1-204ENST00000537529 FAM19A4Q96LR4 140 aa11.85□□□□□ -0.51
MKS1-204ENST00000537529 MAP1LC3AQ9H492 121 aa11.85□□□□□ -0.51
MKS1-204ENST00000537529 A0A1B0GV90 55 aa11.84□□□□□ -0.51
MKS1-204ENST00000537529 TCF21O43680 179 aa11.84□□□□□ -0.51
MKS1-204ENST00000537529 LGALS1P09382 135 aaKnown RBP11.84□□□□□ -0.51
MKS1-204ENST00000537529 MAJINQ3KP22 176 aa11.84□□□□□ -0.51
MKS1-204ENST00000537529 PRSS57Q6UWY2 283 aa11.84□□□□□ -0.51
MKS1-204ENST00000537529 ZNF747Q9BV97 191 aa11.84□□□□□ -0.51
MKS1-204ENST00000537529 IGHV4-4A0A075B6R2 117 aa11.83□□□□□ -0.51
MKS1-204ENST00000537529 J3KRW8 73 aa11.83□□□□□ -0.51
MKS1-204ENST00000537529 MYOZ3Q8TDC0 251 aa11.83□□□□□ -0.51
MKS1-204ENST00000537529 ZFYVE26Q68DK2 2539 aa11.83□□□□□ -0.52
MKS1-204ENST00000537529 EDN2P20800 178 aa11.83□□□□□ -0.52
MKS1-204ENST00000537529 DEFB1P60022 68 aa11.83□□□□□ -0.52
MKS1-204ENST00000537529 SPANXN1Q5VSR9 72 aa11.83□□□□□ -0.52
MKS1-204ENST00000537529 Q6ZQT7 251 aa11.83□□□□□ -0.52
MKS1-204ENST00000537529 F6UB75 175 aa11.82□□□□□ -0.52
MKS1-204ENST00000537529 H3BVH4 76 aa11.82□□□□□ -0.52
MKS1-204ENST00000537529 SRD5A1P18405 259 aa11.82□□□□□ -0.52
MKS1-204ENST00000537529 Q6ZN92 141 aa11.82□□□□□ -0.52
MKS1-204ENST00000537529 APRG1Q8IVJ8 170 aa11.82□□□□□ -0.52
MKS1-204ENST00000537529 A0A096LNJ9 63 aa11.82□□□□□ -0.52
MKS1-204ENST00000537529 HBDP02042 147 aa11.82□□□□□ -0.52
MKS1-204ENST00000537529 IGLL1P15814 213 aa11.82□□□□□ -0.52
MKS1-204ENST00000537529 HNRNPA3P51991 378 aaKnown RBP11.82□□□□□ -0.52
MKS1-204ENST00000537529 LINC01545Q5VT33 79 aa11.82□□□□□ -0.52
MKS1-204ENST00000537529 DCANP1Q8TF63 244 aa11.82□□□□□ -0.52
MKS1-204ENST00000537529 HSBP1L1C9JCN9 74 aa11.81□□□□□ -0.52
MKS1-204ENST00000537529 H0Y8G0 127 aa11.81□□□□□ -0.52
MKS1-204ENST00000537529 TNFRSF6BO95407 300 aa11.81□□□□□ -0.52
MKS1-204ENST00000537529 RNASE4P34096 147 aaKnown RBP11.81□□□□□ -0.52
MKS1-204ENST00000537529 ASIPP42127 132 aa11.81□□□□□ -0.52
MKS1-204ENST00000537529 KRTAP1-3Q8IUG1 177 aa11.81□□□□□ -0.52
MKS1-204ENST00000537529 UBE2E2Q96LR5 201 aa11.81□□□□□ -0.52
MKS1-204ENST00000537529 ST20Q9HBF5 79 aa11.81□□□□□ -0.52
MKS1-204ENST00000537529 NXT2Q9NPJ8 142 aaKnown RBP11.81□□□□□ -0.52
MKS1-204ENST00000537529 SELENOKQ9Y6D0 94 aa11.81□□□□□ -0.52
MKS1-204ENST00000537529 ANKRD17O75179 2603 aaKnown RBP11.81□□□□□ -0.52
MKS1-204ENST00000537529 CR1P17927 2039 aa11.81□□□□□ -0.52
MKS1-204ENST00000537529 FAM208BQ5VWN6 2430 aa11.8□□□□□ -0.52
MKS1-204ENST00000537529 LGALS9O00182 355 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms