RNA–Protein interactions for RNA: ENST00000537033.1

SYNE1-235, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 4

Gene SYNE1, Length 647 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-235ENST00000537033 MRPL16Q9NX20 251 aaKnown RBP9.6□□□□□ -0.87
SYNE1-235ENST00000537033 TP53TG3Q9ULZ0 132 aa9.6□□□□□ -0.87
SYNE1-235ENST00000537033 DYNC1H1Q14204 4646 aaKnown RBP9.6□□□□□ -0.87
SYNE1-235ENST00000537033 RBAKDNA6NC62 111 aa9.59□□□□□ -0.87
SYNE1-235ENST00000537033 TAS2R45P59539 299 aa9.59□□□□□ -0.87
SYNE1-235ENST00000537033 RANP62826 216 aaKnown RBP9.59□□□□□ -0.87
SYNE1-235ENST00000537033 KHDC3LQ587J8 217 aa9.59□□□□□ -0.87
SYNE1-235ENST00000537033 LYPD1Q8N2G4 141 aa9.59□□□□□ -0.87
SYNE1-235ENST00000537033 PRO0255Q9UI72 69 aa9.59□□□□□ -0.87
SYNE1-235ENST00000537033 INMT-MINDY4F8WBC2 141 aa9.58□□□□□ -0.88
SYNE1-235ENST00000537033 NXPH4O95158 308 aa9.58□□□□□ -0.88
SYNE1-235ENST00000537033 IFNA5P01569 189 aa9.58□□□□□ -0.88
SYNE1-235ENST00000537033 LINC00315P59091 139 aa9.58□□□□□ -0.88
SYNE1-235ENST00000537033 ZNF266Q14584 549 aa9.58□□□□□ -0.88
SYNE1-235ENST00000537033 FFAR4Q5NUL3 377 aa9.58□□□□□ -0.88
SYNE1-235ENST00000537033 SCGB1C1Q8TD33 95 aa9.58□□□□□ -0.88
SYNE1-235ENST00000537033 PPP1R1CQ8WVI7 109 aa9.58□□□□□ -0.88
SYNE1-235ENST00000537033 TRGV4A0A0C4DH28 118 aa9.57□□□□□ -0.88
SYNE1-235ENST00000537033 H0YIZ8 118 aa9.57□□□□□ -0.88
SYNE1-235ENST00000537033 SSNA1O43805 119 aa9.57□□□□□ -0.88
SYNE1-235ENST00000537033 MRPL23Q16540 153 aaKnown RBP9.57□□□□□ -0.88
SYNE1-235ENST00000537033 MUC21Q5SSG8 566 aa9.57□□□□□ -0.88
SYNE1-235ENST00000537033 PCNPQ8WW12 178 aaKnown RBP9.57□□□□□ -0.88
SYNE1-235ENST00000537033 C8orf49Q96NF6 230 aa9.57□□□□□ -0.88
SYNE1-235ENST00000537033 KRTAP4-5Q9BYR2 181 aa9.57□□□□□ -0.88
SYNE1-235ENST00000537033 HHLA3Q9XRX5 114 aa9.57□□□□□ -0.88
SYNE1-235ENST00000537033 TRGV11A0A075B6L2 103 aa9.56□□□□□ -0.88
SYNE1-235ENST00000537033 EREGO14944 169 aa9.56□□□□□ -0.88
SYNE1-235ENST00000537033 CRYBA4P53673 196 aa9.56□□□□□ -0.88
SYNE1-235ENST00000537033 H2BFSP57053 126 aa9.56□□□□□ -0.88
SYNE1-235ENST00000537033 FAM74A1Q5RGS3 127 aa9.56□□□□□ -0.88
SYNE1-235ENST00000537033 FAM159AQ6UWV7 190 aa9.56□□□□□ -0.88
SYNE1-235ENST00000537033 Q6ZQT7 251 aa9.56□□□□□ -0.88
SYNE1-235ENST00000537033 CMTM2Q8TAZ6 248 aa9.56□□□□□ -0.88
SYNE1-235ENST00000537033 HSPB11Q9Y547 144 aa9.56□□□□□ -0.88
SYNE1-235ENST00000537033 LENEPQ9Y5L5 61 aa9.56□□□□□ -0.88
SYNE1-235ENST00000537033 SRIP30626 198 aa9.55□□□□□ -0.88
SYNE1-235ENST00000537033 DEFA1P59665 94 aa9.55□□□□□ -0.88
SYNE1-235ENST00000537033 DEFA3P59666 94 aa9.55□□□□□ -0.88
SYNE1-235ENST00000537033 KRTAP10-2P60368 255 aa9.55□□□□□ -0.88
SYNE1-235ENST00000537033 FHL2Q14192 279 aa9.55□□□□□ -0.88
SYNE1-235ENST00000537033 Q6AWC8 147 aa9.55□□□□□ -0.88
SYNE1-235ENST00000537033 NEGR1Q7Z3B1 354 aa9.55□□□□□ -0.88
SYNE1-235ENST00000537033 HYLS1Q96M11 299 aa9.55□□□□□ -0.88
SYNE1-235ENST00000537033 SPXQ9BT56 116 aa9.55□□□□□ -0.88
SYNE1-235ENST00000537033 SMIM3Q9BZL3 60 aa9.55□□□□□ -0.88
SYNE1-235ENST00000537033 TRAV9-2A0A087WT02 112 aa9.54□□□□□ -0.88
SYNE1-235ENST00000537033 DIRC3C9JPN6 131 aa9.54□□□□□ -0.88
SYNE1-235ENST00000537033 MPC2O95563 127 aa9.54□□□□□ -0.88
SYNE1-235ENST00000537033 RPL12P30050 165 aaKnown RBP9.54□□□□□ -0.88
SYNE1-235ENST00000537033 ERVFC1-1P60608 527 aa9.54□□□□□ -0.88
SYNE1-235ENST00000537033 TMEM183BQ1AE95 376 aa9.54□□□□□ -0.88
SYNE1-235ENST00000537033 NFE4Q86UQ8 179 aa9.54□□□□□ -0.88
SYNE1-235ENST00000537033 TMEM183AQ8IXX5 376 aa9.54□□□□□ -0.88
SYNE1-235ENST00000537033 TMED6Q8WW62 240 aa9.54□□□□□ -0.88
SYNE1-235ENST00000537033 MARVELD1Q9BSK0 173 aa9.54□□□□□ -0.88
SYNE1-235ENST00000537033 OTORQ9NRC9 128 aa9.54□□□□□ -0.88
SYNE1-235ENST00000537033 NAGKQ9UJ70 344 aa9.54□□□□□ -0.88
SYNE1-235ENST00000537033 RPH3ALQ9UNE2 315 aa9.54□□□□□ -0.88
SYNE1-235ENST00000537033 ORM1P02763 201 aa9.53□□□□□ -0.88
SYNE1-235ENST00000537033 LYPD5Q6UWN5 251 aa9.53□□□□□ -0.88
SYNE1-235ENST00000537033 Q8N1X5 172 aa9.53□□□□□ -0.88
SYNE1-235ENST00000537033 OR10G4Q8NGN3 311 aa9.53□□□□□ -0.88
SYNE1-235ENST00000537033 MDFICQ9P1T7 246 aa9.53□□□□□ -0.88
SYNE1-235ENST00000537033 LY96Q9Y6Y9 160 aa9.53□□□□□ -0.88
SYNE1-235ENST00000537033 A0A1W2PPV4 95 aa9.52□□□□□ -0.89
SYNE1-235ENST00000537033 C9JCJ5 164 aa9.52□□□□□ -0.89
SYNE1-235ENST00000537033 K7EQD1 137 aa9.52□□□□□ -0.89
SYNE1-235ENST00000537033 SFTA3P0C7M3 94 aa9.52□□□□□ -0.89
SYNE1-235ENST00000537033 IFITM3Q01628 133 aa9.52□□□□□ -0.89
SYNE1-235ENST00000537033 ACOT6Q3I5F7 207 aaPredicted RBP9.52□□□□□ -0.89
SYNE1-235ENST00000537033 PQLC2Q6ZP29 291 aa9.52□□□□□ -0.89
SYNE1-235ENST00000537033 Q6ZRN7 208 aaPredicted RBP9.52□□□□□ -0.89
SYNE1-235ENST00000537033 IQCF2Q8IXL9 164 aa9.52□□□□□ -0.89
SYNE1-235ENST00000537033 RASL10AQ92737 203 aa9.52□□□□□ -0.89
SYNE1-235ENST00000537033 ZNF479Q96JC4 524 aa9.52□□□□□ -0.89
SYNE1-235ENST00000537033 TXNDC17Q9BRA2 123 aa9.52□□□□□ -0.89
SYNE1-235ENST00000537033 MBD2Q9UBB5 411 aa9.52□□□□□ -0.89
SYNE1-235ENST00000537033 PGPA6NDG6 321 aa9.51□□□□□ -0.89
SYNE1-235ENST00000537033 K7EP13 123 aa9.51□□□□□ -0.89
SYNE1-235ENST00000537033 GYPEP15421 78 aa9.51□□□□□ -0.89
SYNE1-235ENST00000537033 TDRG1Q3Y452 100 aa9.51□□□□□ -0.89
SYNE1-235ENST00000537033 SCRT2Q9NQ03 307 aa9.51□□□□□ -0.89
SYNE1-235ENST00000537033 TRAV4A0A0B4J268 109 aa9.5□□□□□ -0.89
SYNE1-235ENST00000537033 TRAV21A0A0B4J279 112 aa9.5□□□□□ -0.89
SYNE1-235ENST00000537033 EVI2AP22794 236 aa9.5□□□□□ -0.89
SYNE1-235ENST00000537033 CDPF1Q6NVV7 123 aa9.5□□□□□ -0.89
SYNE1-235ENST00000537033 GOLT1AQ6ZVE7 132 aa9.5□□□□□ -0.89
SYNE1-235ENST00000537033 ARL6IP6Q8N6S5 226 aa9.5□□□□□ -0.89
SYNE1-235ENST00000537033 OR4C5Q8NGB2 326 aa9.5□□□□□ -0.89
SYNE1-235ENST00000537033 PGPEP1Q9NXJ5 209 aa9.5□□□□□ -0.89
SYNE1-235ENST00000537033 RYR1P21817 5038 aa9.5□□□□□ -0.89
SYNE1-235ENST00000537033 HSPG2P98160 4391 aa9.49□□□□□ -0.89
SYNE1-235ENST00000537033 M0R2P5 195 aa9.49□□□□□ -0.89
SYNE1-235ENST00000537033 EIF3GO75821 320 aaKnown RBP eCLIP9.49□□□□□ -0.89
SYNE1-235ENST00000537033 SH2D6Q7Z4S9 175 aa9.49□□□□□ -0.89
SYNE1-235ENST00000537033 KCNS1Q96KK3 526 aa9.49□□□□□ -0.89
SYNE1-235ENST00000537033 NDFIP1Q9BT67 221 aa9.49□□□□□ -0.89
SYNE1-235ENST00000537033 SDF2L1Q9HCN8 221 aa9.49□□□□□ -0.89
SYNE1-235ENST00000537033 TREM1Q9NP99 234 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms