RNA–Protein interactions for RNA: ENST00000536871.6

SMG6-203, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 2 BASIC

Gene SMG6, Length 1,865 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-203ENST00000536871 OR10J6PQ8NGY7 276 aa10.37□□□□□ -0.75
SMG6-203ENST00000536871 VPS25Q9BRG1 176 aa10.37□□□□□ -0.75
SMG6-203ENST00000536871 TPPP3Q9BW30 176 aa10.37□□□□□ -0.75
SMG6-203ENST00000536871 FAM181BA6NEQ2 426 aa10.36□□□□□ -0.75
SMG6-203ENST00000536871 PRAC2D3DTV9 90 aa10.36□□□□□ -0.75
SMG6-203ENST00000536871 ID1P41134 155 aa10.36□□□□□ -0.75
SMG6-203ENST00000536871 ZNF80P51504 273 aaPredicted RBP10.36□□□□□ -0.75
SMG6-203ENST00000536871 UNQ9165/PRO28630Q6UXU0 137 aa10.36□□□□□ -0.75
SMG6-203ENST00000536871 IL17RELQ6ZVW7 336 aa10.36□□□□□ -0.75
SMG6-203ENST00000536871 TMEM191AQ9H0A3 160 aa10.36□□□□□ -0.75
SMG6-203ENST00000536871 CST9LQ9H4G1 147 aa10.36□□□□□ -0.75
SMG6-203ENST00000536871 U3KQK5 164 aa10.36□□□□□ -0.75
SMG6-203ENST00000536871 IGHV3OR16-13A0A075B7E8 117 aa10.36□□□□□ -0.75
SMG6-203ENST00000536871 IGHV3-74A0A0B4J1X5 117 aa10.36□□□□□ -0.75
SMG6-203ENST00000536871 TMEM238C9JI98 176 aa10.36□□□□□ -0.75
SMG6-203ENST00000536871 TRBV12-3P01733 135 aa10.36□□□□□ -0.75
SMG6-203ENST00000536871 IGHV3-11P01762 117 aa10.36□□□□□ -0.75
SMG6-203ENST00000536871 C3orf79P0CE67 100 aa10.36□□□□□ -0.75
SMG6-203ENST00000536871 ERCC8Q13216 396 aa10.36□□□□□ -0.75
SMG6-203ENST00000536871 Q71RC1 249 aaPredicted RBP10.36□□□□□ -0.75
SMG6-203ENST00000536871 ORMDL3Q8N138 153 aa10.36□□□□□ -0.75
SMG6-203ENST00000536871 FAM19A2Q8N3H0 131 aa10.36□□□□□ -0.75
SMG6-203ENST00000536871 RHPN1-AS1Q9BWJ2 59 aa10.36□□□□□ -0.75
SMG6-203ENST00000536871 SMPXQ9UHP9 88 aa10.36□□□□□ -0.75
SMG6-203ENST00000536871 AKAP6Q13023 2319 aa10.35□□□□□ -0.75
SMG6-203ENST00000536871 TMSB15BA0A087X1C1 80 aa10.35□□□□□ -0.75
SMG6-203ENST00000536871 IGHV3-49A0A0A0MS15 119 aa10.35□□□□□ -0.75
SMG6-203ENST00000536871 SOCS3O14543 225 aa10.35□□□□□ -0.75
SMG6-203ENST00000536871 HSPB8Q9UJY1 196 aa10.35□□□□□ -0.75
SMG6-203ENST00000536871 SMAD7O15105 426 aaKnown RBP10.34□□□□□ -0.75
SMG6-203ENST00000536871 CACNG7P62955 275 aa10.34□□□□□ -0.75
SMG6-203ENST00000536871 TWIST1Q15672 202 aa10.34□□□□□ -0.75
SMG6-203ENST00000536871 Q6ZS46 218 aa10.34□□□□□ -0.75
SMG6-203ENST00000536871 AP5S1Q9NUS5 200 aa10.34□□□□□ -0.75
SMG6-203ENST00000536871 CFAP46Q8IYW2 2715 aa10.34□□□□□ -0.75
SMG6-203ENST00000536871 CRXO43186 299 aaPredicted RBP10.34□□□□□ -0.75
SMG6-203ENST00000536871 FA2HQ7L5A8 372 aa10.34□□□□□ -0.75
SMG6-203ENST00000536871 TMEM86BQ8N661 226 aa10.34□□□□□ -0.75
SMG6-203ENST00000536871 RNF152Q8N8N0 203 aa10.34□□□□□ -0.75
SMG6-203ENST00000536871 TMEM70Q9BUB7 260 aa10.34□□□□□ -0.75
SMG6-203ENST00000536871 LGALS9O00182 355 aa10.33□□□□□ -0.76
SMG6-203ENST00000536871 LEPROTL1O95214 131 aa10.33□□□□□ -0.76
SMG6-203ENST00000536871 RNF151Q2KHN1 245 aa10.33□□□□□ -0.76
SMG6-203ENST00000536871 PRSS3P2Q8NHM4 247 aa10.33□□□□□ -0.76
SMG6-203ENST00000536871 MYOZ3Q8TDC0 251 aa10.33□□□□□ -0.76
SMG6-203ENST00000536871 URB1-AS1Q96HZ7 61 aa10.33□□□□□ -0.76
SMG6-203ENST00000536871 PSMG3-AS1Q96PY0 264 aa10.33□□□□□ -0.76
SMG6-203ENST00000536871 TRAV9-2A0A087WT02 112 aa10.32□□□□□ -0.76
SMG6-203ENST00000536871 TRAV21A0A0B4J279 112 aa10.32□□□□□ -0.76
SMG6-203ENST00000536871 CBY3A6NI87 242 aa10.32□□□□□ -0.76
SMG6-203ENST00000536871 UBE2E2Q96LR5 201 aa10.32□□□□□ -0.76
SMG6-203ENST00000536871 Q96MF0 132 aa10.32□□□□□ -0.76
SMG6-203ENST00000536871 PRELID3AQ96N28 172 aa10.32□□□□□ -0.76
SMG6-203ENST00000536871 IGHV4-4A0A075B6R2 117 aa10.32□□□□□ -0.76
SMG6-203ENST00000536871 IGHV1-24A0A0C4DH33 117 aa10.32□□□□□ -0.76
SMG6-203ENST00000536871 C2orf70A6NJV1 201 aa10.32□□□□□ -0.76
SMG6-203ENST00000536871 LGALS1P09382 135 aaKnown RBP10.32□□□□□ -0.76
SMG6-203ENST00000536871 MED14OSP0DP75 135 aa10.32□□□□□ -0.76
SMG6-203ENST00000536871 CD33P20138 364 aa10.32□□□□□ -0.76
SMG6-203ENST00000536871 RPL11P62913 178 aaKnown RBP10.32□□□□□ -0.76
SMG6-203ENST00000536871 Q8N2B8 174 aa10.32□□□□□ -0.76
SMG6-203ENST00000536871 OR10AG1Q8NH19 301 aa10.32□□□□□ -0.76
SMG6-203ENST00000536871 SPTAN1Q13813 2472 aaKnown RBP10.31□□□□□ -0.76
SMG6-203ENST00000536871 TMEM213A2RRL7 107 aa10.31□□□□□ -0.76
SMG6-203ENST00000536871 CKS2P33552 79 aa10.31□□□□□ -0.76
SMG6-203ENST00000536871 KRTAP10-9P60411 292 aa10.31□□□□□ -0.76
SMG6-203ENST00000536871 APRG1Q8IVJ8 170 aa10.31□□□□□ -0.76
SMG6-203ENST00000536871 MAP1LC3CQ9BXW4 147 aa10.31□□□□□ -0.76
SMG6-203ENST00000536871 USP24Q9UPU5 2620 aa10.31□□□□□ -0.76
SMG6-203ENST00000536871 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.31□□□□□ -0.763e-6■■■□□ 15.7
SMG6-203ENST00000536871 USP9XQ93008 2570 aaPredicted RBP10.31□□□□□ -0.76
SMG6-203ENST00000536871 IGKV3D-20A0A0C4DH25 116 aa10.3□□□□□ -0.76
SMG6-203ENST00000536871 D6R8Y8 96 aa10.3□□□□□ -0.76
SMG6-203ENST00000536871 SNAI2O43623 268 aa10.3□□□□□ -0.76
SMG6-203ENST00000536871 VAMP3Q15836 100 aa10.3□□□□□ -0.76
SMG6-203ENST00000536871 MRPL51Q4U2R6 128 aaKnown RBP10.3□□□□□ -0.76
SMG6-203ENST00000536871 TM4SF20Q53R12 229 aa10.3□□□□□ -0.76
SMG6-203ENST00000536871 OR8A1Q8NGG7 326 aa10.3□□□□□ -0.76
SMG6-203ENST00000536871 ZNF702PQ9H963 129 aa10.3□□□□□ -0.76
SMG6-203ENST00000536871 HINT1P49773 126 aaPredicted RBP10.3□□□□□ -0.76
SMG6-203ENST00000536871 EBLN2Q6P2I7 272 aa10.3□□□□□ -0.76
SMG6-203ENST00000536871 AMN1Q8IY45 258 aa10.3□□□□□ -0.76
SMG6-203ENST00000536871 C20orf173Q96LM9 149 aa10.3□□□□□ -0.76
SMG6-203ENST00000536871 FAM19A4Q96LR4 140 aa10.3□□□□□ -0.76
SMG6-203ENST00000536871 RNF114Q9Y508 228 aa10.3□□□□□ -0.76
SMG6-203ENST00000536871 TACC2O95359 2948 aa10.29□□□□□ -0.76
SMG6-203ENST00000536871 HOXA3O43365 443 aaPredicted RBP10.29□□□□□ -0.76
SMG6-203ENST00000536871 C12orf54Q6X4T0 127 aa10.29□□□□□ -0.76
SMG6-203ENST00000536871 DEFB125Q8N687 156 aa10.29□□□□□ -0.76
SMG6-203ENST00000536871 MAPK1IP1LQ8NDC0 245 aa10.29□□□□□ -0.76
SMG6-203ENST00000536871 ODF3Q96PU9 254 aa10.29□□□□□ -0.76
SMG6-203ENST00000536871 ST20Q9HBF5 79 aa10.29□□□□□ -0.76
SMG6-203ENST00000536871 SYS1-DBNDD2H3BUS1 97 aa10.28□□□□□ -0.76
SMG6-203ENST00000536871 M0QZ24 198 aa10.28□□□□□ -0.76
SMG6-203ENST00000536871 PRB4P10163 310 aaPredicted RBP10.28□□□□□ -0.76
SMG6-203ENST00000536871 SCGB1A1P11684 91 aa10.28□□□□□ -0.76
SMG6-203ENST00000536871 TMEM95Q3KNT9 176 aa10.28□□□□□ -0.76
SMG6-203ENST00000536871 SPATA12Q7Z6I5 190 aa10.28□□□□□ -0.76
SMG6-203ENST00000536871 ZNF575Q86XF7 245 aa10.28□□□□□ -0.76
SMG6-203ENST00000536871 ZFAND2AQ8N6M9 145 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms