RNA–Protein interactions for RNA: ENST00000536823.5

YBX3-206, Transcript of Y-box binding protein 3, human

TSL 2

Gene YBX3, Length 840 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
YBX3-206	ENST00000536823	PARD6G	Q9BYG4	376 aa	Predicted RBP	4.97	□□□□□ -1.61
YBX3-206	ENST00000536823	MBD2	Q9UBB5	411 aa		4.97	□□□□□ -1.61
YBX3-206	ENST00000536823	PRELID1	Q9Y255	219 aa		4.97	□□□□□ -1.61
YBX3-206	ENST00000536823	DNAH17	Q9UFH2	4485 aa		4.97	□□□□□ -1.61
YBX3-206	ENST00000536823	MUC4	Q99102	2169 aa		4.97	□□□□□ -1.61
YBX3-206	ENST00000536823	FAT2	Q9NYQ8	4349 aa		4.96	□□□□□ -1.61
YBX3-206	ENST00000536823	C17orf112	F2Z3M2	114 aa		4.96	□□□□□ -1.62
YBX3-206	ENST00000536823		H7BYZ3	331 aa		4.96	□□□□□ -1.62
YBX3-206	ENST00000536823	PTTG1	O95997	202 aa		4.96	□□□□□ -1.62
YBX3-206	ENST00000536823		P0DMU3	169 aa		4.96	□□□□□ -1.62
YBX3-206	ENST00000536823	FAM231A	P0DMU4	169 aa		4.96	□□□□□ -1.62
YBX3-206	ENST00000536823	FAM231C	P0DMU5	169 aa		4.96	□□□□□ -1.62
YBX3-206	ENST00000536823	CT45A10	P0DMU9	189 aa		4.96	□□□□□ -1.62
YBX3-206	ENST00000536823	RPL12	P30050	165 aa	Known RBP	4.96	□□□□□ -1.62
YBX3-206	ENST00000536823	LEP	P41159	167 aa		4.96	□□□□□ -1.62
YBX3-206	ENST00000536823	ANXA2R	Q3ZCQ2	193 aa		4.96	□□□□□ -1.62
YBX3-206	ENST00000536823	ZNF493	Q6ZR52	646 aa		4.96	□□□□□ -1.62
YBX3-206	ENST00000536823	POM121L12	Q8N7R1	296 aa		4.96	□□□□□ -1.62
YBX3-206	ENST00000536823	RNASE8	Q8TDE3	154 aa	Known RBP	4.96	□□□□□ -1.62
YBX3-206	ENST00000536823	TMEM263	Q8WUH6	116 aa	Known RBP	4.96	□□□□□ -1.62
YBX3-206	ENST00000536823	BLNK	Q8WV28	456 aa		4.96	□□□□□ -1.62
YBX3-206	ENST00000536823	FUT9	Q9Y231	359 aa		4.96	□□□□□ -1.62
YBX3-206	ENST00000536823	TIMM9	Q9Y5J7	89 aa		4.96	□□□□□ -1.62
YBX3-206	ENST00000536823	TIMM8B	Q9Y5J9	83 aa	Predicted RBP	4.96	□□□□□ -1.62
YBX3-206	ENST00000536823	ALG5	Q9Y673	324 aa		4.96	□□□□□ -1.62
YBX3-206	ENST00000536823	NACA	E9PAV3	2078 aa		4.95	□□□□□ -1.62
YBX3-206	ENST00000536823	IFNA5	P01569	189 aa		4.95	□□□□□ -1.62
YBX3-206	ENST00000536823	NBEAP1	P0C6P0	100 aa		4.95	□□□□□ -1.62
YBX3-206	ENST00000536823	ERCC8	Q13216	396 aa		4.95	□□□□□ -1.62
YBX3-206	ENST00000536823	FFAR4	Q5NUL3	377 aa		4.95	□□□□□ -1.62
YBX3-206	ENST00000536823	EXOC3-AS1	Q8N2X6	119 aa		4.95	□□□□□ -1.62
YBX3-206	ENST00000536823	C15orf53	Q8NAA6	179 aa		4.95	□□□□□ -1.62
YBX3-206	ENST00000536823	FXYD5	Q96DB9	178 aa		4.95	□□□□□ -1.62
YBX3-206	ENST00000536823	PHYHIPL	Q96FC7	376 aa		4.95	□□□□□ -1.62
YBX3-206	ENST00000536823	PAXX	Q9BUH6	204 aa		4.95	□□□□□ -1.62
YBX3-206	ENST00000536823	SMIM3	Q9BZL3	60 aa		4.95	□□□□□ -1.62
YBX3-206	ENST00000536823	OR51M1	Q9H341	326 aa		4.95	□□□□□ -1.62
YBX3-206	ENST00000536823	AAMDC	Q9H7C9	122 aa		4.95	□□□□□ -1.62
YBX3-206	ENST00000536823	DNAH2	Q9P225	4427 aa		4.95	□□□□□ -1.62
YBX3-206	ENST00000536823	IGKV2-40	A0A087WW87	121 aa	Predicted RBP	4.94	□□□□□ -1.62
YBX3-206	ENST00000536823	C7orf71	A4D174	169 aa		4.94	□□□□□ -1.62
YBX3-206	ENST00000536823	KLLN	B2CW77	178 aa		4.94	□□□□□ -1.62
YBX3-206	ENST00000536823	OR7C2	O60412	319 aa		4.94	□□□□□ -1.62
YBX3-206	ENST00000536823	IGKV2D-40	P01614	121 aa	Predicted RBP	4.94	□□□□□ -1.62
YBX3-206	ENST00000536823	SLC25A5	P05141	298 aa	Known RBP	4.94	□□□□□ -1.62
YBX3-206	ENST00000536823	ATP5G1	P05496	136 aa		4.94	□□□□□ -1.62
YBX3-206	ENST00000536823	OR10J4	P0C629	311 aa		4.94	□□□□□ -1.62
YBX3-206	ENST00000536823	DEFB130B	P0DP73	79 aa		4.94	□□□□□ -1.62
YBX3-206	ENST00000536823	DEFB130A	P0DP74	79 aa		4.94	□□□□□ -1.62
YBX3-206	ENST00000536823	HTN1	P15515	57 aa		4.94	□□□□□ -1.62
YBX3-206	ENST00000536823	CRISP2	P16562	243 aa		4.94	□□□□□ -1.62
YBX3-206	ENST00000536823	ATP5G3	P48201	142 aa		4.94	□□□□□ -1.62
YBX3-206	ENST00000536823	UBE2L3	P68036	154 aa	Known RBP	4.94	□□□□□ -1.62
YBX3-206	ENST00000536823	FCN2	Q15485	313 aa		4.94	□□□□□ -1.62
YBX3-206	ENST00000536823	KHDC3L	Q587J8	217 aa		4.94	□□□□□ -1.62
YBX3-206	ENST00000536823	FAM122C	Q6P4D5	195 aa		4.94	□□□□□ -1.62
YBX3-206	ENST00000536823	C9orf47	Q6ZRZ4	202 aa		4.94	□□□□□ -1.62
YBX3-206	ENST00000536823	SCGB1C1	Q8TD33	95 aa		4.94	□□□□□ -1.62
YBX3-206	ENST00000536823	FAM19A4	Q96LR4	140 aa		4.94	□□□□□ -1.62
YBX3-206	ENST00000536823	LINC00477	Q96M19	166 aa		4.94	□□□□□ -1.62
YBX3-206	ENST00000536823	PYGO2	Q9BRQ0	406 aa		4.94	□□□□□ -1.62
YBX3-206	ENST00000536823	AGPAT4-IT1	Q9H0P7	198 aa		4.94	□□□□□ -1.62
YBX3-206	ENST00000536823	WFDC1	Q9HC57	220 aa		4.94	□□□□□ -1.62
YBX3-206	ENST00000536823	NOP10	Q9NPE3	64 aa	Known RBP	4.94	□□□□□ -1.62
YBX3-206	ENST00000536823	TRAV12-3	A0A0B4J271	114 aa		4.93	□□□□□ -1.62
YBX3-206	ENST00000536823	CBY3	A6NI87	242 aa		4.93	□□□□□ -1.62
YBX3-206	ENST00000536823		F5H768	121 aa		4.93	□□□□□ -1.62
YBX3-206	ENST00000536823	NMB	P08949	121 aa		4.93	□□□□□ -1.62
YBX3-206	ENST00000536823	TAS2R45	P59539	299 aa		4.93	□□□□□ -1.62
YBX3-206	ENST00000536823	BTN1A1	Q13410	526 aa		4.93	□□□□□ -1.62
YBX3-206	ENST00000536823	ACOT6	Q3I5F7	207 aa	Predicted RBP	4.93	□□□□□ -1.62
YBX3-206	ENST00000536823	RNF212	Q495C1	297 aa		4.93	□□□□□ -1.62
YBX3-206	ENST00000536823	TMEM78	Q5T7P6	136 aa		4.93	□□□□□ -1.62
YBX3-206	ENST00000536823	KRTAP5-1	Q6L8H4	278 aa		4.93	□□□□□ -1.62
YBX3-206	ENST00000536823	UBE2DNL	Q8IWF7	75 aa		4.93	□□□□□ -1.62
YBX3-206	ENST00000536823	LYPD1	Q8N2G4	141 aa		4.93	□□□□□ -1.62
YBX3-206	ENST00000536823	ZFAND2A	Q8N6M9	145 aa		4.93	□□□□□ -1.62
YBX3-206	ENST00000536823	LINC00612	Q8N6U2	182 aa		4.93	□□□□□ -1.62
YBX3-206	ENST00000536823	LINC00467	Q9BRT7	94 aa		4.93	□□□□□ -1.62
YBX3-206	ENST00000536823	CTDSP1	Q9GZU7	261 aa		4.93	□□□□□ -1.62
YBX3-206	ENST00000536823	MED28	Q9H204	178 aa		4.93	□□□□□ -1.62
YBX3-206	ENST00000536823	TRBV7-9	A0A0J9YWB2	115 aa		4.92	□□□□□ -1.62
YBX3-206	ENST00000536823	RBAKDN	A6NC62	111 aa		4.92	□□□□□ -1.62
YBX3-206	ENST00000536823	SNURFL	B1AK76	121 aa		4.92	□□□□□ -1.62
YBX3-206	ENST00000536823	ZNF324	O75467	553 aa	Predicted RBP	4.92	□□□□□ -1.62
YBX3-206	ENST00000536823	GIP	P09681	153 aa	Predicted RBP	4.92	□□□□□ -1.62
YBX3-206	ENST00000536823	M6PR	P20645	277 aa		4.92	□□□□□ -1.62
YBX3-206	ENST00000536823	CSN1S1	P47710	185 aa		4.92	□□□□□ -1.62
YBX3-206	ENST00000536823	ZNF138	P52744	262 aa		4.92	□□□□□ -1.62
YBX3-206	ENST00000536823	CD300C	Q08708	224 aa		4.92	□□□□□ -1.62
YBX3-206	ENST00000536823	DAZ2	Q13117	558 aa	Known RBP	4.92	□□□□□ -1.62
YBX3-206	ENST00000536823	PRR9	Q5T870	116 aa		4.92	□□□□□ -1.62
YBX3-206	ENST00000536823	PQLC2	Q6ZP29	291 aa		4.92	□□□□□ -1.62
YBX3-206	ENST00000536823	ZNF680	Q8NEM1	530 aa		4.92	□□□□□ -1.62
YBX3-206	ENST00000536823	ASB13	Q8WXK3	278 aa		4.92	□□□□□ -1.62
YBX3-206	ENST00000536823	AQP10	Q96PS8	301 aa		4.92	□□□□□ -1.62
YBX3-206	ENST00000536823	VGLL1	Q99990	258 aa		4.92	□□□□□ -1.62
YBX3-206	ENST00000536823		Q9H3A6	140 aa		4.92	□□□□□ -1.62
YBX3-206	ENST00000536823	ZNF492	Q9P255	531 aa		4.92	□□□□□ -1.62
YBX3-206	ENST00000536823	GAGE10	A6NGK3	116 aa		4.91	□□□□□ -1.62

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